MetaProFi: an ultrafast chunked Bloom filter for storing and querying protein and nucleotide sequence data for accurate identification of functionally relevant genetic variants von Srikakulam, Sanjay K, Keller, Sebastian, Dabbaghie, Fawaz, Bals, Robert, Kalinina, Olga V

Volltext

A shift of dynamic equilibrium between the KIT active and inactive states causes drug resistance von Srikakulam, Sanjay K., Bastys, Tomas, Kalinina, Olga V.

Volltext

Epistatic interactions promote persistence of NS3-Q80K in HCV infection by compensating for protein folding instability von Dultz, Georg, Srikakulam, Sanjay K., Konetschnik, Michael, Shimakami, Tetsuro, Doncheva, Nadezhda T., Dietz, Julia, Sarrazin, Christoph, Biondi, Ricardo M., Zeuzem, Stefan, Tampé, Robert, Kalinina, Olga V., Welsch, Christoph

Volltext

d-StructMAn: Containerized structural annotation on the scale from genetic variants to whole proteomes von Gress, Alexander, Srikakulam, Sanjay K, Keller, Sebastian, Ramensky, Vasily, Kalinina, Olga V

Volltext

PanPA: generation and alignment of panproteome graphs von Dabbaghie, Fawaz, Srikakulam, Sanjay K, Marschall, Tobias, Kalinina, Olga V

Volltext

Distinct Patterns of Blood Cytokines Beyond a Cytokine Storm Predict Mortality in COVID-19 von Herr, Christian, Mang, Sebastian, Mozafari, Bahareh, Guenther, Katharina, Speer, Thimoteus, Seibert, Martina, Srikakulam, Sanjay Kumar, Beisswenger, Christoph, Ritzmann, Felix, Keller, Andreas, Mueller, Rolf, Smola, Sigrun, Eisinger, Dominic, Zemlin, Michael, Danziger, Guy, Volk, Thomas, Hoersch, Sabrina, Krawczyk, Marcin, Lammert, Frank, Adams, Thomas, Wagenpfeil, Gudrun, Kindermann, Michael, Marcu, Constantin, Ataya, Zuhair Wolf Dietrich, Mittag, Marc, Schwarzkopf, Konrad, Custodis, Florian, Grandt, Daniel, Schaefer, Harald, Eltges, Kai, Lepper, Philipp M, Bals, Robert

Volltext

Exploring the conformational landscapes of HIV protease structural ensembles using principal component analysis von Hassan, Sameer, Srikakulam, Sanjay Kumar, Chandramohan, Yuvaraj, Thangam, Manonanthini, Muthukumar, Soundharrya, Gayathri Devi, P. K., Hanna, Luke Elizabeth

Volltext

A hydrogel-based in vitro assay for the fast prediction of antibiotic accumulation in Gram-negative bacteria von Richter, Robert, Kamal, Mohamed.A.M., García-Rivera, Mariel A., Kaspar, Jerome, Junk, Maximilian, Elgaher, Walid A.M., Srikakulam, Sanjay Kumar, Gress, Alexander, Beckmann, Anja, Grißmer, Alexander, Meier, Carola, Vielhaber, Michael, Kalinina, Olga, Hirsch, Anna K.H., Hartmann, Rolf W., Brönstrup, Mark, Schneider-Daum, Nicole, Lehr, Claus-Michael

Volltext