SARS-CoV-2 antigen exposure history shapes phenotypes and specificity of memory CD8+ T cells von Minervina, Anastasia A., Pogorelyy, Mikhail V., Kirk, Allison M., Crawford, Jeremy Chase, Allen, E. Kaitlynn, Chou, Ching-Heng, Mettelman, Robert C., Allison, Kim J., Lin, Chun-Yang, Brice, David C., Zhu, Xun, Vegesana, Kasi, Wu, Gang, Trivedi, Sanchit, Kottapalli, Pratibha, Darnell, Daniel, McNeely, Suzanne, Olsen, Scott R., Schultz-Cherry, Stacey, Estepp, Jeremie H., McGargill, Maureen A., Wolf, Joshua, Thomas, Paul G.

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SARS-CoV-2 mRNA vaccination elicits a robust and persistent T follicular helper cell response in humans von Mudd, Philip A., Minervina, Anastasia A., Pogorelyy, Mikhail V., Turner, Jackson S., Kim, Wooseob, Kalaidina, Elizaveta, Petersen, Jan, Schmitz, Aaron J., Lei, Tingting, Haile, Alem, Kirk, Allison M., Mettelman, Robert C., Crawford, Jeremy Chase, Nguyen, Thi H.O., Rowntree, Louise C., Rosati, Elisa, Richards, Katherine A., Sant, Andrea J., Klebert, Michael K., Suessen, Teresa, Middleton, William D., Estepp, Jeremie H., Schultz-Cherry, Stacey, McGargill, Maureen A., Gaur, Aditya, Hoffman, James, Mori, Motomi, Tang, Li, Tuomanen, Elaine, Webby, Richard, Hayden, Randall T., Hakim, Hana, Hijano, Diego R., Allison, Kim J., Allen, E. Kaitlynn, Bajracharya, Resha, Awad, Walid, Van de Velde, Lee-Ann, Clark, Brandi L., Wilson, Taylor L., Souquette, Aisha, Castellaw, Ashley, Dallas, Ronald H., Gowen, Ashleigh, Fabrizio, Thomas P., Lin, Chun-Yang, Brice, David C., Cherry, Sean, Roubidoux, Ericka Kirkpatrick, Cortez, Valerie, Freiden, Pamela, Wohlgemuth, Nicholas, Whitt, Kendall, Wolf, Joshua, Teefey, Sharlene A., O’Halloran, Jane A., Presti, Rachel M., Kedzierska, Katherine, Rossjohn, Jamie, Thomas, Paul G., Ellebedy, Ali H.

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Altered CD4+ T cell immunity in nurses occupationally exposed to viral pathogens von Elias, G., Souquette, A., Heynderickx, S., De Meester, I., Jansens, H., Beutels, P., Van Damme, P., Smits, E., Thomas, P. G., Van Tendeloo, V., Ogunjimi, B.

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Pre-existing humoral immunity to human common cold coronaviruses negatively impacts the protective SARS-CoV-2 antibody response von Lin, Chun-Yang, Wolf, Joshua, Brice, David C., Sun, Yilun, Locke, Macauley, Cherry, Sean, Castellaw, Ashley H., Wehenkel, Marie, Crawford, Jeremy Chase, Zarnitsyna, Veronika I., Duque, Daniel, Allison, Kim J., Allen, E. Kaitlynn, Brown, Scott A., Mandarano, Alexandra H., Estepp, Jeremie H., Gaur, Aditya H., Hoffman, James M., Mori, Tomi, Tuomanen, Elaine I., Webby, Richard J., Hakim, Hana, Hayden, Randall T., Hijano, Diego R., Awad, Walid, Bajracharya, Resha, Clark, Brandi L., Cortez, Valerie, Dallas, Ronald H., Fabrizio, Thomas, Freiden, Pamela, Gowen, Ashleigh, Hodges, Jason, Kirk, Allison M., Roubidoux, Ericka Kirkpatrick, Mettelman, Robert C., Russell-Bell, Jamie, Souquette, Aisha, Sparks, James, Van de Velde, Lee-Ann, Vazquez-Pagan, Ana, Whitt, Kendall, Wilson, Taylor L., Wittman, David E., Wohlgemuth, Nicholas, Wu, Gang, Taylor, Charles, Molina-Paris, Carmen, Schultz-Cherry, Stacey, Tang, Li, Thomas, Paul G., McGargill, Maureen A.

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Preventing packaging of translatable P5-associated DNA contaminants in recombinant AAV vector preps von Brimble, MA, Cheng, PH, Winston, SM, Reeves, IL, Souquette, A, Spence, Y, Zhou, J, Wang, YD, Morton, CL, Valentine, M, Thomas, PG, Nathwani, AC, Gray, JT, Davidoff, AM

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Variation in the basal immune state and implications for disease von Souquette, Aisha, Thomas, Paul G

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TCR meta-clonotypes for biomarker discovery with tcrdist3 enabled identification of public, HLA-restricted clusters of SARS-CoV-2 TCRs von Mayer-Blackwell, Koshlan, Schattgen, Stefan, Cohen-Lavi, Liel, Crawford, Jeremy C, Souquette, Aisha, Gaevert, Jessica A, Hertz, Tomer, Thomas, Paul G, Bradley, Philip, Fiore-Gartland, Andrew

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Integrating T cell receptor sequences and transcriptional profiles by clonotype neighbor graph analysis (CoNGA) von Schattgen, Stefan A., Guion, Kate, Crawford, Jeremy Chase, Souquette, Aisha, Barrio, Alvaro Martinez, Stubbington, Michael J. T., Thomas, Paul G., Bradley, Philip

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Pre-existing T cell immune response specific to computationally optimized broadly reactive hemagglutinin antigens (COBRA-HA) in influenza vaccinees von Moraes, Vanessa S, Souquette, Aisha, Ross, Ted M

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Past Life and Future Effects-How Heterologous Infections Alter Immunity to Influenza Viruses von Souquette, Aisha, Thomas, Paul G

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Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities von Russell, Magdalena L, Souquette, Aisha, Levine, David M, Schattgen, Stefan A, Allen, E Kaitlynn, Kuan, Guillermina, Simon, Noah, Balmaseda, Angel, Gordon, Aubree, Thomas, Paul G, Matsen, 4th, Frederick A, Bradley, Philip

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Quantifiable predictive features define epitope-specific T cell receptor repertoires von Dash, Pradyot, Fiore-Gartland, Andrew J., Hertz, Tomer, Wang, George C., Sharma, Shalini, Souquette, Aisha, Crawford, Jeremy Chase, Clemens, E. Bridie, Nguyen, Thi H. O., Kedzierska, Katherine, La Gruta, Nicole L., Bradley, Philip, Thomas, Paul G.

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Preexisting memory CD4 T cells in naïve individuals confer robust immunity upon hepatitis B vaccination von Elias, George, Meysman, Pieter, Bartholomeus, Esther, De Neuter, Nicolas, Keersmaekers, Nina, Suls, Arvid, Jansens, Hilde, Souquette, Aisha, De Reu, Hans, Emonds, Marie-Paule, Smits, Evelien, Lion, Eva, Thomas, Paul G, Mortier, Geert, Van Damme, Pierre, Beutels, Philippe, Laukens, Kris, Van Tendeloo, Viggo, Ogunjimi, Benson

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T cell responses in pediatric patients with severe influenza disease von S. Menon, Smrithi, Souquette, Aisha, Allen, E.Kaitlynn, St. James, Deryn, Mettelman, Robert, Clark, Brandi, Chase Crawford, Jeremy, Novak, Tanya, Randolph, Adrienne, Thomas, Paul

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Lack of functional TCR-epitope interaction is associated with herpes zoster through reduced downstream T cell activation von Boeren, Marlies, de Vrij, Nicky, Ha, My K., Valkiers, Sebastiaan, Souquette, Aisha, Gielis, Sofie, Kuznetsova, Maria, Schippers, Jolien, Bartholomeus, Esther, Van den Bergh, Johan, Michels, Nele, Aerts, Olivier, Leysen, Julie, Bervoets, An, Lambert, Julien, Leuridan, Elke, Wens, Johan, Peeters, Karin, Emonds, Marie-Paule, Elias, George, Vandamme, Niels, Jansens, Hilde, Adriaensen, Wim, Suls, Arvid, Vanhee, Stijn, Hens, Niel, Smits, Evelien, Van Damme, Pierre, Thomas, Paul G., Beutels, Philippe, Ponsaerts, Peter, Van Tendeloo, Viggo, Delputte, Peter, Laukens, Kris, Meysman, Pieter, Ogunjimi, Benson

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Utility of nasal swabs for assessing mucosal immune responses towards SARS-CoV-2 von Roubidoux, Ericka Kirkpatrick, Brigleb, Pamela H., Vegesana, Kasi, Souquette, Aisha, Whitt, Kendall, Freiden, Pamela, Green, Amanda, Thomas, Paul G., McGargill, Maureen A., Wolf, Joshua, Schultz-Cherry, Stacey

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ADAMTS4 promotes chronic airway inflammation and hyperresponsiveness in HDM-based mouse model of asthma: A potential therapeutic target for asthma traits von Ghonim, Mohamed A., Boyd, David F., Van de Velde, Lee-Ann, Souquette, Aisha, Vogel, Peter, Thomas, Paul G.

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Linking immune receptor sequence to transcriptional states with clonotype neighbor graph analysis (CoNGA) von Schattgen, Stefan A, Guion, Kate, Crawford, Jeremy Chase, Souquette, Aisha, Barrio, Alvaro Martinez, Stubbington, Michael, Thomas, Paul Glyndwr, Bradley, Philip

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Correlates of susceptibility in household influenza studies von St. James, Deryn, Souquette, Aisha, Mettelman, Robert, Van de Velde, Lee-Ann, Wilson, Taylor, Vegesana, Kasi, Allen, E. Kaitlynn, Petrie, Joshua, Gordon, Aubree, Martin, Emily, Monto, Arnold, Thomas, Paul

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A constant companion: immune recognition and response to cytomegalovirus with aging and implications for immune fitness von Souquette, Aisha, Frere, Justin, Smithey, Megan, Sauce, Delphine, Thomas, Paul G.

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