Building connectomes using diffusion MRI: why, how and but von Sotiropoulos, Stamatios N., Zalesky, Andrew

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An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging von Andersson, Jesper L.R., Sotiropoulos, Stamatios N.

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Non-parametric representation and prediction of single- and multi-shell diffusion-weighted MRI data using Gaussian processes von Andersson, Jesper L.R., Sotiropoulos, Stamatios N.

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XTRACT - Standardised protocols for automated tractography in the human and macaque brain von Warrington, Shaun, Bryant, Katherine L., Khrapitchev, Alexandr A., Sallet, Jerome, Charquero-Ballester, Marina, Douaud, Gwenaëlle, Jbabdi, Saad, Mars, Rogier B., Sotiropoulos, Stamatios N.

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Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes von Hernandez-Fernandez, Moises, Reguly, Istvan, Jbabdi, Saad, Giles, Mike, Smith, Stephen, Sotiropoulos, Stamatios N.

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Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction von Bastiani, Matteo, Cottaar, Michiel, Fitzgibbon, Sean P., Suri, Sana, Alfaro-Almagro, Fidel, Sotiropoulos, Stamatios N., Jbabdi, Saad, Andersson, Jesper L.R.

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Hierarchical Heterogeneity across Human Cortex Shapes Large-Scale Neural Dynamics von Demirtaş, Murat, Burt, Joshua B., Helmer, Markus, Ji, Jie Lisa, Adkinson, Brendan D., Glasser, Matthew F., Van Essen, David C., Sotiropoulos, Stamatios N., Anticevic, Alan, Murray, John D.

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Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank von Alfaro-Almagro, Fidel, Jenkinson, Mark, Bangerter, Neal K., Andersson, Jesper L.R., Griffanti, Ludovica, Douaud, Gwenaëlle, Sotiropoulos, Stamatios N., Jbabdi, Saad, Hernandez-Fernandez, Moises, Vallee, Emmanuel, Vidaurre, Diego, Webster, Matthew, McCarthy, Paul, Rorden, Christopher, Daducci, Alessandro, Alexander, Daniel C., Zhang, Hui, Dragonu, Iulius, Matthews, Paul M., Miller, Karla L., Smith, Stephen M.

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Subthalamic deep brain stimulation sweet spots and hyperdirect cortical connectivity in Parkinson's disease von Akram, Harith, Sotiropoulos, Stamatios N., Jbabdi, Saad, Georgiev, Dejan, Mahlknecht, Philipp, Hyam, Jonathan, Foltynie, Thomas, Limousin, Patricia, De Vita, Enrico, Jahanshahi, Marjan, Hariz, Marwan, Ashburner, John, Behrens, Tim, Zrinzo, Ludvic

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Uncertainty modelling in deep learning for safer neuroimage enhancement: Demonstration in diffusion MRI von Tanno, Ryutaro, Worrall, Daniel E., Kaden, Enrico, Ghosh, Aurobrata, Grussu, Francesco, Bizzi, Alberto, Sotiropoulos, Stamatios N., Criminisi, Antonio, Alexander, Daniel C.

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The minimal preprocessing pipelines for the Human Connectome Project von Glasser, Matthew F., Sotiropoulos, Stamatios N., Wilson, J. Anthony, Coalson, Timothy S., Fischl, Bruce, Andersson, Jesper L., Xu, Junqian, Jbabdi, Saad, Webster, Matthew, Polimeni, Jonathan R., Van Essen, David C., Jenkinson, Mark

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The Human Connectome Project: A retrospective von Elam, Jennifer Stine, Glasser, Matthew F., Harms, Michael P., Sotiropoulos, Stamatios N., Andersson, Jesper L.R., Burgess, Gregory C., Curtiss, Sandra W., Oostenveld, Robert, Larson-Prior, Linda J., Schoffelen, Jan-Mathijs, Hodge, Michael R., Cler, Eileen A., Marcus, Daniel M., Barch, Deanna M., Yacoub, Essa, Smith, Stephen M., Ugurbil, Kamil, Van Essen, David C.

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The Human Connectome Project's neuroimaging approach von Glasser, Matthew F, Smith, Stephen M, Marcus, Daniel S, Andersson, Jesper L R, Auerbach, Edward J, Behrens, Timothy E J, Coalson, Timothy S, Harms, Michael P, Jenkinson, Mark, Moeller, Steen, Robinson, Emma C, Sotiropoulos, Stamatios N, Xu, Junqian, Yacoub, Essa, Ugurbil, Kamil, Van Essen, David C

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Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project von Bastiani, Matteo, Andersson, Jesper L.R., Cordero-Grande, Lucilio, Murgasova, Maria, Hutter, Jana, Price, Anthony N., Makropoulos, Antonios, Fitzgibbon, Sean P., Hughes, Emer, Rueckert, Daniel, Victor, Suresh, Rutherford, Mary, Edwards, A. David, Smith, Stephen M., Tournier, Jacques-Donald, Hajnal, Joseph V., Jbabdi, Saad, Sotiropoulos, Stamatios N.

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Model-based analysis of multishell diffusion MR data for tractography: How to get over fitting problems von Jbabdi, Saad, Sotiropoulos, Stamatios N., Savio, Alexander M., Graña, Manuel, Behrens, Timothy E. J.

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Quantum computing at the frontiers of biological sciences von Emani, Prashant S., Warrell, Jonathan, Anticevic, Alan, Bekiranov, Stefan, Gandal, Michael, McConnell, Michael J., Sapiro, Guillermo, Aspuru-Guzik, Alán, Baker, Justin T., Bastiani, Matteo, Murray, John D., Sotiropoulos, Stamatios N., Taylor, Jacob, Senthil, Geetha, Lehner, Thomas, Gerstein, Mark B., Harrow, Aram W.

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Whole brain comparative anatomy using connectivity blueprints von Mars, Rogier B, Sotiropoulos, Stamatios N, Passingham, Richard E, Sallet, Jerome, Verhagen, Lennart, Khrapitchev, Alexandre A, Sibson, Nicola, Jbabdi, Saad

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Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging von Mollink, Jeroen, Kleinnijenhuis, Michiel, Cappellen van Walsum, Anne-Marie van, Sotiropoulos, Stamatios N., Cottaar, Michiel, Mirfin, Christopher, Heinrich, Mattias P., Jenkinson, Mark, Pallebage-Gamarallage, Menuka, Ansorge, Olaf, Jbabdi, Saad, Miller, Karla L.

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High resolution whole brain diffusion imaging at 7T for the Human Connectome Project von Vu, A.T., Auerbach, E., Lenglet, C., Moeller, S., Sotiropoulos, S.N., Jbabdi, S., Andersson, J., Yacoub, E., Ugurbil, K.

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A biophysical model of dynamic balancing of excitation and inhibition in fast oscillatory large-scale networks von Abeysuriya, Romesh G, Hadida, Jonathan, Sotiropoulos, Stamatios N, Jbabdi, Saad, Becker, Robert, Hunt, Benjamin A E, Brookes, Matthew J, Woolrich, Mark W

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