The conserved domain database in 2023 von Wang, Jiyao, Chitsaz, Farideh, Derbyshire, Myra K, Gonzales, Noreen R, Gwadz, Marc, Lu, Shennan, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Yamashita, Roxanne A, Yang, Mingzhang, Zhang, Dachuan, Zheng, Chanjuan, Lanczycki, Christopher J, Marchler-Bauer, Aron

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CDD/SPARCLE: the conserved domain database in 2020 von Lu, Shennan, Wang, Jiyao, Chitsaz, Farideh, Derbyshire, Myra K, Geer, Renata C, Gonzales, Noreen R, Gwadz, Marc, Hurwitz, David I, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Yamashita, Roxanne A, Yang, Mingzhang, Zhang, Dachuan, Zheng, Chanjuan, Lanczycki, Christopher J, Marchler-Bauer, Aron

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Adeno-associated virus analysis by size exclusion chromatography within 3 minutes using short bio-inert columns made with 3 µm particles operated at high flowrates von Song, James Y., Farkas, Tivadar

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CDD/SPARCLE: functional classification of proteins via subfamily domain architectures von Marchler-Bauer, Aron, Bo, Yu, Han, Lianyi, He, Jane, Lanczycki, Christopher J, Lu, Shennan, Chitsaz, Farideh, Derbyshire, Myra K, Geer, Renata C, Gonzales, Noreen R, Gwadz, Marc, Hurwitz, David I, Lu, Fu, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Wang, Zhouxi, Yamashita, Roxanne A, Zhang, Dachuan, Zheng, Chanjuan, Geer, Lewis Y, Bryant, Stephen H

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RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation von Li, Wenjun, O’Neill, Kathleen R, Haft, Daniel H, DiCuccio, Michael, Chetvernin, Vyacheslav, Badretdin, Azat, Coulouris, George, Chitsaz, Farideh, Derbyshire, Myra K, Durkin, A Scott, Gonzales, Noreen R, Gwadz, Marc, Lanczycki, Christopher J, Song, James S, Thanki, Narmada, Wang, Jiyao, Yamashita, Roxanne A, Yang, Mingzhang, Zheng, Chanjuan, Marchler-Bauer, Aron, Thibaud-Nissen, Françoise

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RefSeq: an update on prokaryotic genome annotation and curation von Haft, Daniel H, DiCuccio, Michael, Badretdin, Azat, Brover, Vyacheslav, Chetvernin, Vyacheslav, O'Neill, Kathleen, Li, Wenjun, Chitsaz, Farideh, Derbyshire, Myra K, Gonzales, Noreen R, Gwadz, Marc, Lu, Fu, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Yamashita, Roxanne A, Zheng, Chanjuan, Thibaud-Nissen, Françoise, Geer, Lewis Y, Marchler-Bauer, Aron, Pruitt, Kim D

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CDD: NCBI's conserved domain database von Marchler-Bauer, Aron, Derbyshire, Myra K, Gonzales, Noreen R, Lu, Shennan, Chitsaz, Farideh, Geer, Lewis Y, Geer, Renata C, He, Jane, Gwadz, Marc, Hurwitz, David I, Lanczycki, Christopher J, Lu, Fu, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Wang, Zhouxi, Yamashita, Roxanne A, Zhang, Dachuan, Zheng, Chanjuan, Bryant, Stephen H

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CDD: conserved domains and protein three-dimensional structure von Marchler-Bauer, Aron, Zheng, Chanjuan, Chitsaz, Farideh, Derbyshire, Myra K, Geer, Lewis Y, Geer, Renata C, Gonzales, Noreen R, Gwadz, Marc, Hurwitz, David I, Lanczycki, Christopher J, Lu, Fu, Lu, Shennan, Marchler, Gabriele H, Song, James S, Thanki, Narmada, Yamashita, Roxanne A, Zhang, Dachuan, Bryant, Stephen H

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Toward Rational Design of Cu/SSZ-13 Selective Catalytic Reduction Catalysts: Implications from Atomic-Level Understanding of Hydrothermal Stability von Song, James, Wang, Yilin, Walter, Eric D, Washton, Nancy M, Mei, Donghai, Kovarik, Libor, Engelhard, Mark H, Prodinger, Sebastian, Wang, Yong, Peden, Charles H. F, Gao, Feng

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Chemoenzymatic Reversible Immobilization and Labeling of Proteins without Prior Purification von Rashidian, Mohammad, Song, James M, Pricer, Rachel E, Distefano, Mark D

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Comparison of Analytical Methods for Antibody–Drug Conjugates Produced by Chemical Site-Specific Conjugation: First-Generation AJICAP von Matsuda, Yutaka, Robles, Veronica, Malinao, Maria-Christina, Song, James, Mendelsohn, Brian A

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High-Throughput Platform Assay Technology for the Discovery of pre-microRNA-Selective Small Molecule Probes von Lorenz, Daniel A, Song, James M, Garner, Amanda L

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Proof of site-specificity of antibody-drug conjugates produced by chemical conjugation technology: AJICAP first generation von Matsuda, Yutaka, Malinao, Maria-Christina, Robles, Veronica, Song, James, Yamada, Kei, Mendelsohn, Brian A.

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An ECD and NMR/DP4+ Computational Pipeline for Structure Revision and Elucidation of Diphenazine-Based Natural Products von Zhuang, Yihao, Yang, Fei, Menon, Arya, Song, James M., Espinoza, Rosa V., Schultz, Pamela J., Garner, Amanda L., Tripathi, Ashootosh

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Characterization of Tumor Size Changes Over Time From the Phase 3 Study of Lenvatinib in Thyroid Cancer von Robinson, Bruce, Schlumberger, Martin, Wirth, Lori J, Dutcus, Corina E, Song, James, Taylor, Matthew H, Kim, Sung-Bae, Krzyzanowska, Monika K, Capdevila, Jaume, Sherman, Steven I, Tahara, Makoto

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CDD: specific functional annotation with the Conserved Domain Database von Marchler-Bauer, Aron, Anderson, John B, Chitsaz, Farideh, Derbyshire, Myra K, DeWeese-Scott, Carol, Fong, Jessica H, Geer, Lewis Y, Geer, Renata C, Gonzales, Noreen R, Gwadz, Marc, He, Siqian, Hurwitz, David I, Jackson, John D, Ke, Zhaoxi, Lanczycki, Christopher J, Liebert, Cynthia A, Liu, Chunlei, Lu, Fu, Lu, Shennan, Marchler, Gabriele H, Mullokandov, Mikhail, Song, James S, Tasneem, Asba, Thanki, Narmada, Yamashita, Roxanne A, Zhang, Dachuan, Zhang, Naigong, Bryant, Stephen H

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Phase 2 study of eribulin mesylate as first-line therapy for locally recurrent or metastatic human epidermal growth factor receptor 2-negative breast cancer von McIntyre, Kristi, O’Shaughnessy, Joyce, Schwartzberg, Lee, Glück, Stefan, Berrak, Erhan, Song, James X., Cox, David, Vahdat, Linda T.

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Phase I Study of RO4929097, a Gamma Secretase Inhibitor of Notch Signaling, in Patients With Refractory Metastatic or Locally Advanced Solid Tumors von TOLCHER, Anthony W, MESSERSMITH, Wells A, BOYLAN, John F, XU, Zhi-Xin, KA WANG, KOEHLER, Astrid, SONG, James, MIDDLETON, Steven A, DEUTSCH, Jonathan, DEMARIO, Mark, KURZROCK, Razelle, WHELER, Jennifer J, MIKULSKI, Stanislaw M, PAPADOPOULOS, Kyriakos P, KWAK, Eunice L, GIBBON, Darlene G, PATNAIK, Amita, FALCHOOK, Gerald S, DASARI, Arvind, SHAPIRO, Geoffrey I

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Consideration of Binding Kinetics in the Design of Stapled Peptide Mimics of the Disordered Proteins Eukaryotic Translation Initiation Factor 4E-Binding Protein 1 and Eukaryotic Tr... von Gallagher, Erin E, Song, James M, Menon, Arya, Mishra, Lauren D, Chmiel, Alyah F, Garner, Amanda L

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The role of olefin geometry in the activity of hydrocarbon stapled peptides targeting eukaryotic translation initiation factor 4E (eIF4E) von Song, James M, Gallagher, Erin E, Menon, Arya, Mishra, Lauren D, Garner, Amanda L

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