Glucose-Independent Glutamine Metabolism via TCA Cycling for Proliferation and Survival in B Cells von Le, Anne, Lane, Andrew N., Hamaker, Max, Bose, Sminu, Gouw, Arvin, Barbi, Joseph, Tsukamoto, Takashi, Rojas, Camilio J., Slusher, Barbara S., Zhang, Haixia, Zimmerman, Lisa J., Liebler, Daniel C., Slebos, Robbert J.C., Lorkiewicz, Pawel K., Higashi, Richard M., Fan, Teresa W.M., Dang, Chi V.

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Oncogenic KRAS and BRAF Drive Metabolic Reprogramming in Colorectal Cancer von Hutton, Josiah E., Wang, Xiaojing, Zimmerman, Lisa J., Slebos, Robbert J.C., Trenary, Irina A., Young, Jamey D., Li, Ming, Liebler, Daniel C.

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Depletion of Abundant Plasma Proteins and Limitations of Plasma Proteomics von Tu, Chengjian, Rudnick, Paul A, Martinez, Misti Y, Cheek, Kristin L, Stein, Stephen E, Slebos, Robbert J. C, Liebler, Daniel C

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Protein Identification Using Customized Protein Sequence Databases Derived from RNA-Seq Data von Wang, Xiaojing, Slebos, Robbert J. C, Wang, Dong, Halvey, Patrick J, Tabb, David L, Liebler, Daniel C, Zhang, Bing

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Virtual alignment of pathology image series for multi-gigapixel whole slide images von Gatenbee, Chandler D., Baker, Ann-Marie, Prabhakaran, Sandhya, Swinyard, Ottilie, Slebos, Robbert J. C., Mandal, Gunjan, Mulholland, Eoghan, Andor, Noemi, Marusyk, Andriy, Leedham, Simon, Conejo-Garcia, Jose R., Chung, Christine H., Robertson-Tessi, Mark, Graham, Trevor A., Anderson, Alexander R. A.

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Effects of Tobacco Smoking on the Tumor Immune Microenvironment in Head and Neck Squamous Cell Carcinoma von de la Iglesia, Janis V., Slebos, Robbert J. C., Martin-Gomez, Laura, Wang, Xuefeng, Teer, Jamie K., Tan, Aik Choon, Gerke, Travis A., Aden-Buie, Garrick, van Veen, Tessa, Masannat, Jude, Chaudhary, Ritu, Song, Feifei, Fournier, Michelle, Siegel, Erin M., Schabath, Matthew B., Wadsworth, J. Trad, Caudell, Jimmy, Harrison, Louis, Wenig, Bruce M., Conejo-Garcia, Jose, Hernandez-Prera, Juan C., Chung, Christine H.

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Increased Epidermal Growth Factor Receptor Gene Copy Number Is Associated With Poor Prognosis in Head and Neck Squamous Cell Carcinomas von CHUNG, Christine H, ELY, Kim, BURKEY, Brian B, SINARD, Robert, CMELAK, Anthony, LEVY, Shawn, YARBROUGH, Wendell G, SLEBOS, Robbert J. C, HIRSCH, Fred R, MCGAVRAN, Loris, VARELLA-GARCIA, Marileila, PARKER, Joel, PARKER, Natalie, JARRETT, Carolyn, CARTER, Jesse, MURPHY, Barbara A, NETTERVILLE, Fames

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Proteogenomic landscape of squamous cell lung cancer von Stewart, Paul A., Welsh, Eric A., Slebos, Robbert J. C., Fang, Bin, Izumi, Victoria, Chambers, Matthew, Zhang, Guolin, Cen, Ling, Pettersson, Fredrik, Zhang, Yonghong, Chen, Zhihua, Cheng, Chia-Ho, Thapa, Ram, Thompson, Zachary, Fellows, Katherine M., Francis, Jewel M., Saller, James J., Mesa, Tania, Zhang, Chaomei, Yoder, Sean, DeNicola, Gina M., Beg, Amer A., Boyle, Theresa A., Teer, Jamie K., Ann Chen, Yian, Koomen, John M., Eschrich, Steven A., Haura, Eric B.

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Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity von Wang, Jing, Mouradov, Dmitri, Wang, Xiaojing, Jorissen, Robert N, Chambers, Matthew C, Zimmerman, Lisa J, Vasaikar, Suhas, Love, Christopher G, Li, Shan, Lowes, Kym, Leuchowius, Karl-Johan, Jousset, Helene, Weinstock, Janet, Yau, Christopher, Mariadason, John, Shi, Zhiao, Ban, Yuguan, Chen, Xi, Coffey, Robert J.C, Slebos, Robbert J.C, Burgess, Antony W, Liebler, Daniel C, Zhang, Bing, Sieber, Oliver M

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Identification of Proteomic Features To Distinguish Benign Pulmonary Nodules from Lung Adenocarcinoma von Codreanu, Simona G, Hoeksema, Megan D, Slebos, Robbert J. C, Zimmerman, Lisa J, Rahman, S. M. Jamshedur, Li, Ming, Chen, Sheau-Chiann, Chen, Heidi, Eisenberg, Rosana, Liebler, Daniel C, Massion, Pierre P

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Proteogenomic characterization of human colon and rectal cancer von Zhang, Bing, Wang, Jing, Wang, Xiaojing, Zhu, Jing, Liu, Qi, Shi, Zhiao, Chambers, Matthew C., Zimmerman, Lisa J., Shaddox, Kent F., Kim, Sangtae, Davies, Sherri R., Wang, Sean, Wang, Pei, Kinsinger, Christopher R., Rivers, Robert C., Rodriguez, Henry, Townsend, R. Reid, Ellis, Matthew J. C., Carr, Steven A., Tabb, David L., Coffey, Robert J., Slebos, Robbert J. C., Liebler, Daniel C.

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Equivalence of Protein Inventories Obtained from Formalin-fixed Paraffin-embedded and Frozen Tissue in Multidimensional Liquid Chromatography-Tandem Mass Spectrometry Shotgun Prote... von Sprung, Robert W., Brock, Jonathan W.C., Tanksley, Jarred P., Li, Ming, Washington, Mary Kay, Slebos, Robbert J.C., Liebler, Daniel C.

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Comparison of Protein Immunoprecipitation-Multiple Reaction Monitoring with ELISA for Assay of Biomarker Candidates in Plasma von Lin, De, Alborn, William E, Slebos, Robbert J. C, Liebler, Daniel C

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lncDIFF: a novel quasi-likelihood method for differential expression analysis of non-coding RNA von Li, Qian, Yu, Xiaoqing, Chaudhary, Ritu, Slebos, Robbert J C, Chung, Christine H, Wang, Xuefeng

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Accelerated instability testing reveals quantitative mass spectrometry overcomes specimen storage limitations associated with PD-L1 immunohistochemistry von Haragan, Alexander, Liebler, Daniel C., Das, Dimple M., Soper, Michael D., Morrison, Ryan D., Slebos, Robbert J. C., Ackermann, Bradley L., Fill, Jeff A., Schade, Andrew E., Gosney, John R., Gruver, Aaron M.

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Proteomic analysis of oropharyngeal carcinomas reveals novel HPV‐associated biological pathways von Slebos, Robbert J.C., Jehmlich, Nico, Brown, Brandee, Yin, Zhirong, Chung, Christine H., Yarbrough, Wendell G., Liebler, Daniel C.

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Quantitative analysis of CDX2 protein expression improves its clinical utility as a prognostic biomarker in stage II and III colon cancer von den Uil, Sjoerd H., de Wit, Meike, Slebos, Robbert J.C., Delis-van Diemen, Pien M., Sanders, Joyce, Piersma, Sander R., Pham, Thang V., Coupé, Veerle M.H., Bril, Herman, Stockmann, Hein B.A.C., Jimenez, Connie R., Meijer, Gerrit A., Fijneman, Remond J.A.

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Comparative Shotgun Proteomics Using Spectral Count Data and Quasi-Likelihood Modeling von Li, Ming, Gray, William, Zhang, Haixia, Chung, Christine H, Billheimer, Dean, Yarbrough, Wendell G, Liebler, Daniel C, Shyr, Yu, Slebos, Robbert J. C

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Histoecology: Applying Ecological Principles and Approaches to Describe and Predict Tumor Ecosystem Dynamics Across Space and Time von Gatenbee, Chandler D., Minor, Emily S., Slebos, Robbert J. C., Chung, Christine H., Anderson, Alexander R. A.

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Regulation of heparin-binding EGF-like growth factor by miR-212 and acquired cetuximab-resistance in head and neck squamous cell carcinoma von Hatakeyama, Hiromitsu, Cheng, Haixia, Wirth, Pamela, Counsell, Ashley, Marcrom, Samuel R, Wood, Carey Burton, Pohlmann, Paula R, Gilbert, Jill, Murphy, Barbara, Yarbrough, Wendell G, Wheeler, Deric L, Harari, Paul M, Guo, Yan, Shyr, Yu, Slebos, Robbert J, Chung, Christine H

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