The long non-coding RNA MIR31HG regulates the senescence associated secretory phenotype von Montes, Marta, Lubas, Michal, Arendrup, Frederic S., Mentz, Bettina, Rohatgi, Neha, Tumas, Sarunas, Harder, Lea M., Skanderup, Anders J., Andersen, Jens S., Lund, Anders H.

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Long noncoding RNA EGFR-AS1 mediates epidermal growth factor receptor addiction and modulates treatment response in squamous cell carcinoma von Tan, Daniel S W, Chong, Fui Teen, Leong, Hui Sun, Toh, Shen Yon, Lau, Dawn P, Kwang, Xue Lin, Zhang, Xiaoqian, Sundaram, Gopinath M, Tan, Gek San, Chang, Mei Mei, Chua, Boon Tin, Lim, Wan Teck, Tan, Eng Huat, Ang, Mei Kim, Lim, Tony K H, Sampath, Prabha, Chowbay, Balram, Skanderup, Anders J, DasGupta, Ramanuj, Iyer, N Gopalakrishna

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Liquid Biopsies for Cancer Genotyping: Coming of Age? von Jacobsen Skanderup, Anders, Ang, Su Fen, Tan, Daniel S W

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Tissue-specific cell-free DNA degradation quantifies circulating tumor DNA burden von Zhu, Guanhua, Guo, Yu A., Ho, Danliang, Poon, Polly, Poh, Zhong Wee, Wong, Pui Mun, Gan, Anna, Chang, Mei Mei, Kleftogiannis, Dimitrios, Lau, Yi Ting, Tay, Brenda, Lim, Wan Jun, Chua, Clarinda, Tan, Tira J., Koo, Si-Lin, Chong, Dawn Q., Yap, Yoon Sim, Tan, Iain, Ng, Sarah, Skanderup, Anders J.

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SMuRF: portable and accurate ensemble prediction of somatic mutations von Huang, Weitai, Guo, Yu Amanda, Muthukumar, Karthik, Baruah, Probhonjon, Chang, Mei Mei, Jacobsen Skanderup, Anders

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Accurate Ensemble Prediction of Somatic Mutations with SMuRF2 von Huang, Weitai, Sim, Ngak Leng, Skanderup, Anders J.

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Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR mutant lung cancer von Nanjo, Shigeki, Wu, Wei, Karachaliou, Niki, Blakely, Collin M, Suzuki, Junji, Chou, Yu-Ting, Ali, Siraj M, Kerr, D Lucas, Olivas, Victor R, Shue, Jonathan, Rotow, Julia, Mayekar, Manasi K, Haderk, Franziska, Chatterjee, Nilanjana, Urisman, Anatoly, Yeo, Jia Chi, Skanderup, Anders J, Tan, Aaron C, Tam, Wai Leong, Arrieta, Oscar, Hosomichi, Kazuyoshi, Nishiyama, Akihiro, Yano, Seiji, Kirichok, Yuriy, Tan, Daniel Sw, Rosell, Rafael, Okimoto, Ross A, Bivona, Trever G

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Pan-Cancer Analysis of Ligand-Receptor Cross-talk in the Tumor Microenvironment von Ghoshdastider, Umesh, Rohatgi, Neha, Naeini, Marjan Mojtabavi, Baruah, Probhonjon, Revkov, Egor, Guo, Yu Amanda, Rizzetto, Simone, Wong, Angeline M. L., Solai, Sundar, Nguyen, Tin T., Yeong, Joe Poh Sheng, Iqbal, Jabed, Tan, Puay Hoon, Chowbay, Balram, Dasgupta, Ramanuj, Skanderup, Anders J.

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Machine learning identifies activation of RUNX/AP-1 as drivers of mesenchymal and fibrotic regulatory programs in gastric cancer von Razavi-Mohseni, Milad, Huang, Weitai, Guo, Yu A, Shigaki, Dustin, Ho, Shamaine Wei Ting, Tan, Patrick, Skanderup, Anders J, Beer, Michael A

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Mutation hotspots at CTCF binding sites coupled to chromosomal instability in gastrointestinal cancers von Guo, Yu Amanda, Chang, Mei Mei, Huang, Weitai, Ooi, Wen Fong, Xing, Manjie, Tan, Patrick, Skanderup, Anders Jacobsen

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Integrated paired-end enhancer profiling and whole-genome sequencing reveals recurrent CCNE1 and IGF2 enhancer hijacking in primary gastric adenocarcinoma von Ooi, Wen Fong, Nargund, Amrita M, Lim, Kevin Junliang, Zhang, Shenli, Xing, Manjie, Mandoli, Amit, Lim, Jing Quan, Ho, Shamaine Wei Ting, Guo, Yu, Yao, Xiaosai, Lin, Suling Joyce, Nandi, Tannistha, Xu, Chang, Ong, Xuewen, Lee, Minghui, Tan, Angie Lay-Keng, Lam, Yue Ning, Teo, Jing Xian, Kaneda, Atsushi, White, Kevin P, Lim, Weng Khong, Rozen, Steven G, Teh, Bin Tean, Li, Shang, Skanderup, Anders J, Tan, Patrick

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Single-cell and bulk transcriptome sequencing identifies two epithelial tumor cell states and refines the consensus molecular classification of colorectal cancer von Joanito, Ignasius, Wirapati, Pratyaksha, Zhao, Nancy, Nawaz, Zahid, Yeo, Grace, Lee, Fiona, Eng, Christine L. P., Macalinao, Dominique Camat, Kahraman, Merve, Srinivasan, Harini, Lakshmanan, Vairavan, Verbandt, Sara, Tsantoulis, Petros, Gunn, Nicole, Venkatesh, Prasanna Nori, Poh, Zhong Wee, Nahar, Rahul, Oh, Hsueh Ling Janice, Loo, Jia Min, Chia, Shumei, Cheow, Lih Feng, Cheruba, Elsie, Wong, Michael Thomas, Kua, Lindsay, Chua, Clarinda, Nguyen, Andy, Golovan, Justin, Gan, Anna, Lim, Wan-Jun, Guo, Yu Amanda, Yap, Choon Kong, Tay, Brenda, Hong, Yourae, Chong, Dawn Qingqing, Chok, Aik-Yong, Park, Woong-Yang, Han, Shuting, Chang, Mei Huan, Seow-En, Isaac, Fu, Cherylin, Mathew, Ronnie, Toh, Ee-Lin, Hong, Lewis Z., Skanderup, Anders Jacobsen, DasGupta, Ramanuj, Ong, Chin-Ann Johnny, Lim, Kiat Hon, Tan, Emile K. W., Koo, Si-Lin, Leow, Wei Qiang, Tejpar, Sabine, Prabhakar, Shyam, Tan, Iain Beehuat

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Detection of circulating tumor DNA with ultradeep sequencing of plasma cell‐free DNA for monitoring minimal residual disease and early detection of recurrence in early‐stage lung c... von Tan, Aaron C., Lai, Gillianne G. Y., Saw, Stephanie P. L., Chua, Kevin L. M., Takano, Angela, Ong, Boon‐Hean, Koh, Tina P. T., Jain, Amit, Tan, Wan Ling, Ng, Quan Sing, Kanesvaran, Ravindran, Rajasekaran, Tanujaa, Kalashnikova, Ekaterina, Renner, Derrick, Sudhaman, Sumedha, Malhotra, Meenakshi, Sethi, Himanshu, Liu, Minetta C., Aleshin, Alexey, Lim, Wan‐Teck, Tan, Eng‐Huat, Skanderup, Anders J., Ang, Mei‐Kim, Tan, Daniel S. W.

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PD-L1 score as a prognostic biomarker in asian early-stage epidermal growth factor receptor-mutated lung cancer von Saw, Stephanie P.L., Ng, Win Pin, Zhou, Siqin, Lai, Gillianne G.Y., Tan, Aaron C., Ang, Mei-Kim, Lim, Wan-Teck, Kanesvaran, Ravindran, Ng, Quan Sing, Jain, Amit, Tan, Wan Ling, Rajasekaran, Tanujaa, Chan, Johan W.K., Teh, Yi Lin, Pang, Mengyuan, Yeo, Jia-Chi, Takano, Angela, Ong, Boon-Hean, Tan, Eng-Huat, Tan, Sze Huey, Skanderup, Anders J., Tan, Daniel S.W.

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Integrative Profiling of T790M-Negative EGFR-Mutated NSCLC Reveals Pervasive Lineage Transition and Therapeutic Opportunities von Chua, Khi Pin, Teng, Yvonne H. F., Tan, Aaron C., Takano, Angela, Alvarez, Jacob J. S., Nahar, Rahul, Rohatgi, Neha, Lai, Gillianne G. Y., Aung, Zaw Win, Yeong, Joe P. S., Lim, Kiat Hon, Naeini, Marjan Mojtabavi, Kassam, Irfahan, Jain, Amit, Tan, Wan Ling, Gogna, Apoorva, Too, Chow Wei, Kanesvaran, Ravindran, Ng, Quan Sing, Ang, Mei Kim, Rajasekaran, Tanujaa, Anantham, Devanand, Phua, Ghee Chee, Tan, Bien Soo, Lee, Yin Yeng, Wang, Lanying, Teo, Audrey S. M., Khng, Alexis Jiaying, Lim, Ming Jie, Suteja, Lisda, Toh, Chee Keong, Lim, Wan-Teck, Iyer, N. Gopalakrishna, Tam, Wai Leong, Tan, Eng-Huat, Zhai, Weiwei, Hillmer, Axel M., Skanderup, Anders J., Tan, Daniel S. W.

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MutSpot: detection of non-coding mutation hotspots in cancer genomes von Guo, Yu Amanda, Chang, Mei Mei, Skanderup, Anders Jacobsen

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Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis von Vedanayagam, Jeffrey, Chatila, Walid K., Aksoy, Bülent Arman, Majumdar, Sonali, Skanderup, Anders Jacobsen, Demir, Emek, Schultz, Nikolaus, Sander, Chris, Lai, Eric C.

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Body Mass Index and Metastatic Renal Cell Carcinoma: Clinical and Biological Correlations von Albiges, Laurence, Hakimi, A Ari, Xie, Wanling, McKay, Rana R, Simantov, Ronit, Lin, Xun, Lee, Jae-Lyun, Rini, Brian I, Srinivas, Sandy, Bjarnason, Georg A, Ernst, Scott, Wood, Lori A, Vaishamayan, Ulka N, Rha, Sun-Young, Agarwal, Neeraj, Yuasa, Takeshi, Pal, Sumanta K, Bamias, Aristotelis, Zabor, Emily C, Skanderup, Anders J, Furberg, Helena, Fay, Andre P, de Velasco, Guillermo, Preston, Mark A, Wilson, Kathryn M, Cho, Eunyoung, McDermott, David F, Signoretti, Sabina, Heng, Daniel Y C, Choueiri, Toni K

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Accurate somatic variant detection using weakly supervised deep learning von Krishnamachari, Kiran, Lu, Dylan, Swift-Scott, Alexander, Yeraliyev, Anuar, Lee, Kayla, Huang, Weitai, Leng, Sim Ngak, Skanderup, Anders Jacobsen

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Advances in genomic hepatocellular carcinoma research von Huang, Weitai, Skanderup, Anders Jacobsen, Lee, Caroline G

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