Performance of clinical metagenomics in France: a prospective observational study von Fourgeaud, Jacques, Regnault, Béatrice, Ok, Vichita, Da Rocha, Nicolas, Sitterlé, Émilie, Mekouar, Meryem, Faury, Hélène, Milliancourt-Seels, Catherine, Jagorel, Florence, Chrétien, Delphine, Bigot, Thomas, Troadec, Éric, Marques, Isabelle, Serris, Alexandra, Seilhean, Danielle, Neven, Bénédicte, Frange, Pierre, Ferroni, Agnès, Lecuit, Marc, Nassif, Xavier, Lortholary, Olivier, Leruez-Ville, Marianne, Pérot, Philippe, Eloit, Marc, Jamet, Anne

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Within-Host Genomic Diversity of Candida albicans in Healthy Carriers von Sitterlé, Emilie, Maufrais, Corinne, Sertour, Natacha, Palayret, Matthieu, d’Enfert, Christophe, Bougnoux, Marie-Elisabeth

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Candida albicans and Candida dubliniensis Show Different Trailing Effect Patterns When Exposed to Echinocandins and Azoles von Ayadi, Rania, Sitterlé, Emilie, d'Enfert, Christophe, Dannaoui, Eric, Bougnoux, Marie-Elisabeth

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Evaluation of the Bio-Evolution Microsporidia generic and typing real-time PCR assays for the diagnosis of intestinal microsporidiosis von Moniot, Maxime, Nourrisson, Céline, Bonnin, Virginie, Damiani, Céline, Argy, Nicolas, Bonhomme, Julie, Fréalle, Emilie, Angebault, Cécile, Debourgogne, Anne, Sitterlé, Emilie, Flori, Pierre, Brunet, Julie, Dalle, Frédéric, Favennec, Loïc, Poirier, Philippe

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Dynamic full-field optical coherence tomography for live-cell imaging and growth-phase monitoring in Aspergillus fumigatus von Maldiney, Thomas, Garcia-Hermoso, Dea, Sitterlé, Emilie, Chassot, Jean-Marie, Thouvenin, Olivier, Boccara, Claude, Blot, Mathieu, Piroth, Lionel, Quenot, Jean-Pierre, Charles, Pierre-Emmanuel, Aimanianda, Vishukumar, Podac, Bianca, Boulnois, Léa, Dalle, Frédéric, Sautour, Marc, Bougnoux, Marie-Elisabeth, Lanternier, Fanny

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Low prevalence of resistance to azoles in Aspergillus fumigatus in a French cohort of patients treated for haematological malignancies von ALANIO, Alexandre, SITTERLE, Emilie, LIANCE, Martine, FARRUGIA, Cécile, FOULET, Françoise, BOTTEREL, Françoise, HICHERI, Yosr, CORDONNIER, Catherine, COSTA, Jean-Marc, BRETAGNE, Stéphane

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Reduced splenic function can mimic artemisinin resistance in severe malaria von Roussel, Camille, Serris, Alexandra, Henry, Benoît, Lafon Desmurs, Barthelemy, Sitterlé, Emilie, Bougnoux, Marie Elisabeth, Argy, Nicolas, Larréché, Sébastien, De Montalembert, Mariane, Ioos, Vincent, Tantaoui, Ilhame, Chambrion, Charlotte, Fricot, Aurélie, Rouzaud, Claire, Lanternier, Fanny, Lortholary, Olivier, Houzé, Sandrine, Jauréguiberry, Stéphane, Thellier, Marc, Ndour, Papa Alioune, Buffet, Pierre

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Human cryptosporidiosis in immunodeficient patients in France (2015–2017) von Costa, Damien, Razakandrainibe, Romy, Sautour, Marc, Valot, Stéphane, Basmaciyan, Louise, Gargala, Gilles, Lemeteil, Denis, Debourgogne, Anne, Angoulvant, Adela, Agnamey, Patrice, bonhomme, Julie, Degeilh, Brigitte, Chemla, Cathy, Garnaud, Cécile, Lollivier, Coralie, angebault, Cécile, Delaunay, Pascal, Desoubeaux, Guillaume, Fréalle, Emilie, Grenouillet, Frédéric, Morio, Florent, Botterel, Françoise, Belkadi, Ghania, Yera, Hélène, Nevez, Gilles, Iriart, Xavier, Accoceberry, Isabelle, Brunet, Julie, Thellier, Marc, Lemeteil, Denis, Rabodonirina, Meja, Sasso, Milene, Miossec, Charline, Nicolas, Murielle, Desbois, Nicole, Poirier, Philippe, Pomares, Christelle, Houze, Sandrine, Le govic, Yohann, Bellanger, Anne Pauline, Labbe, Franck, Darde, Marie Laure, Duquesnoy, Olivier, Flori, Pierre, Bastien, Patrick, Gueudet, Thomas, Villena, Isabelle, Aubert, Dominique, Cateau, Estelle, Bougnoux, Marie-Elisabeth, Kapel, Nathalie, Dannaoui, Eric, Valentin, Alexis, Totet, Anne, Menotti, Jean, Blanchet, Denis, Demar, Magalie, Dutoit, Emmanuel, Piarroux, Renaud, Sitterle, Emilie, Magne, Denis, Hamane, Samsa, Berry, Antoine, Ramade, Cecile, Favennec, Loïc, Dalle, Frédéric

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Contribution of aqueous humor beta-D-glucan assay in the diagnosis of endophthalmitis of fungal origin von Lefèvre, Leïla, Dedieu, Daphné, Dahane, Naïma, Brezin, Antoine P., Sitterlé, Emilie, Charlier, Caroline, Canouï, Etienne

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Large-scale genome mining allows identification of neutral polymorphisms and novel resistance mutations in genes involved in Candida albicans resistance to azoles and echinocandins von Sitterlé, Emilie, Coste, Alix T, Obadia, Thomas, Maufrais, Corinne, Chauvel, Murielle, Sertour, Natacha, Sanglard, Dominique, Puel, Anne, D’Enfert, Christophe, Bougnoux, Marie-Elisabeth

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Agreement between two real-time commercial PCR kits and an in-house real-time PCR for diagnosis of mucormycosis von Rafanomezantsoa, Lovanirina Clémencia, Sabourin, Estelle, Guennouni Sebbouh, Nadia, Sitterlé, Emilie, Ben Halima, Nada, Raveloarisaona, Yannick Sonjah, Quesne, Gilles, Dannaoui, Eric, Bougnoux, Marie-Elisabeth

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Deep cutaneous mycoses in kidney transplant recipients: Diagnostic and therapeutic challenges von Bertin, Chloé, Sitterlé, Emilie, Scemla, Anne, Fraitag, Sylvie, Delliere, Sarah, Guegan, Sarah, Hermoso, Dea Garcia, Leclerc-Mercier, Stéphanie, Rouzaud, Claire, Lanternier, Fanny, Bougnoux, Marie-Elisabeth

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Azole Preexposure Affects the Aspergillus fumigatus Population in Patients von ALANIO, Alexandre, CABARET, Odile, SITTERLE, Emilie, COSTA, Jean-Marc, BRISSE, Sylvain, CORDONNIER, Catherine, BRETAGNE, Stéphane

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Human-impacted areas of France are environmental reservoirs of the Pseudallescheria boydii/Scedosporium apiospermum species complex von Rougeron, Amandine, Schuliar, Gaëlle, Leto, Julie, Sitterlé, Emilie, Landry, David, Bougnoux, Marie-Elisabeth, Kobi, Abdessamad, Bouchara, Jean-Philippe, Giraud, Sandrine

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Clinical outcome of cystic fibrosis patients colonized by Scedosporium species following lung transplantation: A single‐center 15‐year experience von Parize, Perrine, Boussaud, Veronique, Poinsignon, Vianney, Sitterlé, Emilie, Botterel, Francoise, Lefeuvre, Sandrine, Guillemain, Romain, Dannaoui, Eric, Billaud, Eliane M.

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In vitro activity of miltefosine in combination with voriconazole or amphotericin B against clinical isolates of Scedosporium spp von Compain, Fabrice, Botterel, Françoise, Sitterlé, Emilie, Paugam, André, Bougnoux, Marie-Elisabeth, Dannaoui, Eric

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Acquired Flucytosine Resistance during Combination Therapy with Caspofungin and Flucytosine for Candida glabrata Cystitis von Charlier, Caroline, El Sissy, Carine, Bachelier-Bassi, Sophie, Scemla, Anne, Quesne, Gilles, Sitterlé, Emilie, Legendre, Christophe, Lortholary, Olivier, Bougnoux, Marie-Elisabeth

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Contribution of Ultra Deep Sequencing in the Clinical Diagnosis of a New Fungal Pathogen Species: Basidiobolus meristosporus von Sitterlé, Emilie, Rodriguez, Christophe, Mounier, Roman, Calderaro, Julien, Foulet, Françoise, Develoux, Michel, Pawlotsky, Jean-Michel, Botterel, Françoise

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P418 qPCR is a useful tool for management and surveillance of hospital contacts in the context of a Candida auris infection von Dannaoui, Eric, Molina, Eva, Bidaud, Anne-Laure, Quesne, Gilles, Sitterlé, Emilie, Sertour, Natacha, Granier-Nauge, Emeline, Mignot, Frédérique, Chikhani, Najiby Kassis, Bougnoux, Marie-Elisabeth

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Active Surveillance Program to Increase Awareness on Invasive Fungal Diseases: the French RESSIF Network (2012 to 2018) von Bretagne, Stéphane, Sitbon, Karine, Desnos-Ollivier, Marie, Garcia-Hermoso, Dea, Letscher-Bru, Valérie, Cassaing, Sophie, Millon, Laurence, Morio, Florent, Gangneux, Jean-Pierre, Hasseine, Lilia, Favennec, Loïc, Cateau, Estelle, Bailly, Eric, Moniot, Maxime, Bonhomme, Julie, Desbois-Nogard, Nicole, Chouaki, Taieb, Paugam, André, Bouteille, Bernard, Pihet, Marc, Dalle, Frédéric, Eloy, Odile, Sasso, Milène, Demar, Magalie, Mariani-Kurkdjian, Patricia, Robert, Vincent, Lortholary, Olivier, Dromer, Françoise

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