Genome evolution and the emergence of pathogenicity in avian Escherichia coli von Mageiros, Leonardos, Méric, Guillaume, Bayliss, Sion C., Pensar, Johan, Pascoe, Ben, Mourkas, Evangelos, Calland, Jessica K., Yahara, Koji, Murray, Susan, Wilkinson, Thomas S., Williams, Lisa K., Hitchings, Matthew D., Porter, Jonathan, Kemmett, Kirsty, Feil, Edward J., Jolley, Keith A., Williams, Nicola J., Corander, Jukka, Sheppard, Samuel K.

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PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria von Bayliss, Sion C, Thorpe, Harry A, Coyle, Nicola M, Sheppard, Samuel K, Feil, Edward J

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Post Fukushima accident 129I concentrations in the North Pacific Ocean von Stan-Sion, C.

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Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages von Calland, Jessica K., Pascoe, Ben, Bayliss, Sion C., Mourkas, Evangelos, Berthenet, Elvire, Thorpe, Harry A., Hitchings, Matthew D., Feil, Edward J., Corander, Jukka, Blaser, Martin J., Falush, Daniel, Sheppard, Samuel K.

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Comparative Analyses of Selection Operating on Nontranslated Intergenic Regions of Diverse Bacterial Species von Thorpe, Harry A, Bayliss, Sion C, Hurst, Laurence D, Feil, Edward J

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Measurements of 129I in waters of China, India and Arabian Sea von Enachescu, M., Stan Sion, C., Petre, A.R., Pacesila, D.G.

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Rapid geographical source attribution of Salmonella enterica serovar Enteritidis genomes using hierarchical machine learning von Bayliss, Sion C, Locke, Rebecca K, Jenkins, Claire, Chattaway, Marie Anne, Dallman, Timothy J, Cowley, Lauren A

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WGS of 1058 Enterococcus faecium from Copenhagen, Denmark, reveals rapid clonal expansion of vancomycin-resistant clone ST80 combined with widespread dissemination of a vanA-contai... von Pinholt, Mette, Bayliss, Sion C, Gumpert, Heidi, Worning, Peder, Jensen, Veronika V S, Pedersen, Michael, Feil, Edward J, Westh, Henrik

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Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter von Mourkas, Evangelos, Yahara, Koji, Bayliss, Sion C, Calland, Jessica K, Johansson, Håkan, Mageiros, Leonardos, Muñoz-Ramirez, Zilia Y, Futcher, Grant, Méric, Guillaume, Hitchings, Matthew D, Sandoval-Motta, Santiago, Torres, Javier, Jolley, Keith A, Maiden, Martin C J, Ellström, Patrik, Waldenström, Jonas, Pascoe, Ben, Sheppard, Samuel K

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Agricultural intensification and the evolution of host specialism in the enteric pathogen Campylobacter jejuni von Mourkas, Evangelos, Taylor, Aidan J., Meric, Guillaume, Bayliss, Sion C., Pascoe, Ben, Mageiros, Leonardos, Calland, Jessica K., Hitchings, Matthew D., Ridley, Anne, Vidal, Ana, Forbes, Ken J., Strachan, Norval J. C., Parker, Craig T., Parkhill, Julian, Jolley, Keith A., Cody, Alison J., Maiden, Martin C. J., Kelly, David J., Sheppard, Samuel K.

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Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease von Mourkas, Evangelos, Florez‐Cuadrado, Diego, Pascoe, Ben, Calland, Jessica K., Bayliss, Sion C., Mageiros, Leonardos, Méric, Guillaume, Hitchings, Matthew D., Quesada, Alberto, Porrero, Concepción, Ugarte‐Ruiz, María, Gutiérrez‐Fernández, José, Domínguez, Lucas, Sheppard, Samuel K.

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Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon von Pascoe, Ben, Schiaffino, Francesca, Murray, Susan, Meric, Guillaume, Bayliss, Sion C., Hitchings, Matthew D., Mourkas, Evangelos, Calland, Jessica K., Burga, Rosa, Yori, Pablo Penataro, Jolley, Keith A., Cooper, Kerry K., Parker, Craig T., Olortegui, Maribel Paredes, Kosek, Margaret N., Sheppard, Samuel K.

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Real time monitoring of Aeromonas salmonicida evolution in response to successive antibiotic therapies in a commercial fish farm von Du, Xiaochen, Bayliss, Sion C., Feil, Edward J., Liu, Ying, Wang, Chao, Zhang, Gang, Zhou, Dongsheng, Wei, Dawei, Tang, Na, Leclercq, Sébastien O., Feng, Jie

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Patterns of cross‐resistance and collateral sensitivity between clinical antibiotics and natural antimicrobials von Colclough, Abigail, Corander, Jukka, Sheppard, Samuel K., Bayliss, Sion C., Vos, Michiel

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The Promise of Whole Genome Pathogen Sequencing for the Molecular Epidemiology of Emerging Aquaculture Pathogens von Bayliss, Sion C, Verner-Jeffreys, David W, Bartie, Kerry L, Aanensen, David M, Sheppard, Samuel K, Adams, Alexandra, Feil, Edward J

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AMS method for depth profiling of trace elements concentration in materials – Construction and applications von Stan-Sion, C., Enachescu, M.

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Gene Composition as a Potential Barrier to Large Recombinations in the Bacterial Pathogen Klebsiella pneumoniae von Comandatore, Francesco, Sassera, Davide, Bayliss, Sion C, Scaltriti, Erika, Gaiarsa, Stefano, Cao, Xiaoli, Gales, Ana C, Saito, Ryoichi, Pongolini, Stefano, Brisse, Sylvain, Feil, Edward J, Bandi, Claudio

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Low- and high-load resistance training exercise to volitional fatigue generate exercise-induced appetite suppression von McCarthy, Seth F., Bornath, Derek P.D., Grisebach, Daniel, Tucker, Jessica A.L., Jarosz, Claudia, Ormond, Sion C., Medeiros, Philip J., Hazell, Tom J.

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Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli von Mageiros, Leonardos, Méric, Guillaume, Bayliss, Sion C., Pensar, Johan, Pascoe, Ben, Mourkas, Evangelos, Calland, Jessica K., Yahara, Koji, Murray, Susan, Wilkinson, Thomas S., Williams, Lisa K., Hitchings, Matthew D., Porter, Jonathan, Kemmett, Kirsty, Feil, Edward J., Jolley, Keith A., Williams, Nicola J., Corander, Jukka, Sheppard, Samuel K.

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A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum von Coyle, Nicola M., Bartie, Kerry L., Bayliss, Sion C., Bekaert, Michael, Adams, Alexandra, McMillan, Stuart, Verner-Jeffreys, David W., Desbois, Andrew P., Feil, Edward J.

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