Positive multistate protein design von Vucinic, Jelena, Simoncini, David, Ruffini, Manon, Barbe, Sophie, Schiex, Thomas

Volltext

Guaranteed Discrete Energy Optimization on Large Protein Design Problems von Simoncini, David, Allouche, David, de Givry, Simon, Delmas, Céline, Barbe, Sophie, Schiex, Thomas

Volltext

Computational design of a self-assembling symmetrical β-propeller protein von Voet, Arnout R. D., Noguchi, Hiroki, Addy, Christine, Simoncini, David, Terada, Daiki, Unzai, Satoru, Park, Sam-Yong, Zhang, Kam Y. J., Tame, Jeremy R. H.

Volltext

A probabilistic fragment-based protein structure prediction algorithm von Simoncini, David, Berenger, Francois, Shrestha, Rojan, Zhang, Kam Y J

Volltext

Computational design of symmetrical eight-bladed β-propeller proteins von Noguchi, Hiroki, Addy, Christine, Simoncini, David, Wouters, Staf, Mylemans, Bram, Van Meervelt, Luc, Schiex, Thomas, Zhang, Kam Y J, Tame, Jeremy R H, Voet, Arnout R D

Volltext

Efficient sampling in fragment-based protein structure prediction using an estimation of distribution algorithm von Simoncini, David, Zhang, Kam Y J

Volltext

Evolution-Inspired Computational Design of Symmetric Proteins von Voet, Arnout R. D., Simoncini, David, Tame, Jeremy R. H., Zhang, Kam Y. J.

Volltext

PB1764: SEGMENTATION AND CLASSIFICATION OF BONE MARROW CELLS FROM MULTI‐PRECISION NUMERIZATION OF BONE MARROW SMEARS (BMS) FROM PATIENTS WITH ACUTE MYELOID LEUKEMIA (AML) USING AI... von Bennis, Achraf, Leleux, Philippe, Canali, Alban, Pourtales, Caroline De, Mouysset, Sandrine, Simoncini, David, Brousset, Pierre, Frenois, Francois‐Xavier, Recher, Christian, Alliot, Jean‐Marc, Rieu, Jean‐Baptiste, Bertoli, Sarah

Volltext

Durandal: Fast exact clustering of protein decoys von Berenger, Francois, Shrestha, Rojan, Zhou, Yong, Simoncini, David, Zhang, Kam Y. J.

Volltext

Quality Assessment of Predicted Protein Models Using Energies Calculated by the Fragment Molecular Orbital Method von Simoncini, David, Nakata, Hiroya, Ogata, Koji, Nakamura, Shinichiro, Zhang, Kam YJ

Volltext

Fragger: a protein fragment picker for structural queries [version 2; peer review: 2 approved] von Berenger, Francois, Simoncini, David, Voet, Arnout, Shrestha, Rojan, Zhang, Kam Y.J

Volltext

Fragger: a protein fragment picker for structural queries [version 1; peer review: 2 approved] von Berenger, Francois, Simoncini, David, Voet, Arnout, Shrestha, Rojan, Zhang, Kam Y.J

Volltext

Balancing exploration and exploitation in population-based sampling improves fragment-based de novo protein structure prediction: Efficient Conformational Sampling Strategies von Simoncini, David, Schiex, Thomas, Zhang, Kam Y.J.

Volltext

Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase von Yagi, Sota, Padhi, Aditya K, Vucinic, Jelena, Barbe, Sophie, Schiex, Thomas, Nakagawa, Reiko, Simoncini, David, Zhang, Kam Y. J, Tagami, Shunsuke

Volltext

Complete combinatorial mutational enumeration of a protein functional site enables sequence-landscape mapping and identifies highly-mutated variants that retain activity von Colom, Mireia Solà, Vučinić, Jelena, Adolf-Bryfogle, Jared, Bowman, James W, Verel, Sébastien, Moczygemba, Isabelle, Schiex, Thomas, Simoncini, David, Bahl, Christopher D

Volltext

A structural homology approach for computational protein design with flexible backbone von Simoncini, David, Zhang, Kam Y J, Schiex, Thomas, Barbe, Sophie

Volltext

Balancing exploration and exploitation in population‐based sampling improves fragment‐based de novo protein structure prediction von Simoncini, David, Schiex, Thomas, Zhang, Kam Y.J.

Volltext

Iterated local search with partition crossover for computational protein design von Beuvin, François, Givry, Simon, Schiex, Thomas, Verel, Sébastien, Simoncini, David

Volltext

Complete combinatorial mutational enumeration of a protein functional site enables sequence‐landscape mapping and identifies highly‐mutated variants that retain activity von Colom, Mireia Solà, Vučinić, Jelena, Adolf‐Bryfogle, Jared, Bowman, James W., Verel, Sébastien, Moczygemba, Isabelle, Schiex, Thomas, Simoncini, David, Bahl, Christopher D.

Volltext

Artificial Intelligence-Based Predictive Models for Acute Myeloid Leukemia von Didi, Ibrahim, Simoncini, David, Vergez, Francois, Dumas, Pierre-Yves, Tavitian, Suzanne, Largeaud, Laetitia, Bidet, Audrey, Rieu, Jean-Baptiste, Luquet, Isabelle, Lechevalier, Nicolas, Delabesse, Eric, Sarry, Audrey, De Grande, Anne-Charlotte, Berard, Emilie, Pigneux, Arnaud, Recher, Christian, Alliot, Jean-Marc, Bertoli, Sarah

Volltext