Bacillus subtilis encodes a discrete flap endonuclease that cleaves RNA-DNA hybrids von Lowder, Frances Caroline, Simmons, Lyle A

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Regulation of Cell Division in Bacteria by Monitoring Genome Integrity and DNA Replication Status von Burby, Peter E, Simmons, Lyle A

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Structure and kinase activity of bacterial cell cycle regulator CcrZ von Wozniak, Katherine J, Burby, Peter E, Nandakumar, Jayakrishnan, Simmons, Lyle A

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Two distinct regulatory systems control pulcherrimin biosynthesis in Bacillus subtilis von Fernandez, Nicolas L, Simmons, Lyle A

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MutS2 Promotes Homologous Recombination in Bacillus subtilis von Burby, Peter E, Simmons, Lyle A

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DNA methylation from a Type I restriction modification system influences gene expression and virulence in Streptococcus pyogenes von Nye, Taylor M, Jacob, Kristin M, Holley, Elena K, Nevarez, Juan M, Dawid, Suzanne, Simmons, Lyle A, Watson, Jr, Michael E

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DNA Repair and Genome Maintenance in Bacillus subtilis von LENHART, Justin S, SCHROEDER, Jeremy W, WALSH, Brian W, SIMMONS, Lyle A

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Single-molecule motions and interactions in live cells reveal target search dynamics in mismatch repair von Liao, Yi, Schroeder, Jeremy W., Gao, Burke, Simmons, Lyle A., Biteen, Julie S.

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The roles of replication-transcription conflict in mutagenesis and evolution of genome organization von Schroeder, Jeremy W, Sankar, T Sabari, Wang, Jue D, Simmons, Lyle A

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The Effect of Local Sequence Context on Mutational Bias of Genes Encoded on the Leading and Lagging Strands von Schroeder, Jeremy W., Hirst, William G., Szewczyk, Gabriella A., Simmons, Lyle A.

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Discovery of a dual protease mechanism that promotes DNA damage checkpoint recovery von Burby, Peter E, Simmons, Zackary W, Schroeder, Jeremy W, Simmons, Lyle A

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Cost of rNTP/dNTP pool imbalance at the replication fork von Yao, Nina Y., Schroeder, Jeremy W., Yurieva, Olga, Simmons, Lyle A., O'Donnell, Mike E.

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Methyltransferase DnmA is responsible for genome-wide N6-methyladenosine modifications at non-palindromic recognition sites in Bacillus subtilis von Nye, Taylor M, van Gijtenbeek, Lieke A, Stevens, Amanda G, Schroeder, Jeremy W, Randall, Justin R, Matthews, Lindsay A, Simmons, Lyle A

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Mutagenic cost of ribonucleotides in bacterial DNA von Schroeder, Jeremy W., Randall, Justin R., Hirst, William G., O’Donnell, Michael E., Simmons, Lyle A.

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The sliding clamp tethers the endonuclease domain of MutL to DNA von Pillon, Monica C, Babu, Vignesh M P, Randall, Justin R, Cai, Jiudou, Simmons, Lyle A, Sutton, Mark D, Guarné, Alba

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DNA Methylation and RNA-DNA Hybrids Regulate the Single-Molecule Localization of a DNA Methyltransferase on the Bacterial Nucleoid von Fernandez, Nicolas L, Chen, Ziyuan, Fuller, David E H, van Gijtenbeek, Lieke A, Nye, Taylor M, Biteen, Julie S, Simmons, Lyle A

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Structure of the Endonuclease Domain of MutL: Unlicensed to Cut von Pillon, Monica C., Lorenowicz, Jessica J., Uckelmann, Michael, Klocko, Andrew D., Mitchell, Ryan R., Chung, Yu Seon, Modrich, Paul, Walker, Graham C., Simmons, Lyle A., Friedhoff, Peter, Guarné, Alba

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Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing von Davies, Bryan W, Köhrer, Caroline, Jacob, Asha I, Simmons, Lyle A, Zhu, Jianyu, Aleman, Lourdes M, RajBhandary, Uttam L, Walker, Graham C

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Bacterial DNA excision repair pathways von Wozniak, Katherine J., Simmons, Lyle A.

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DnaN clamp zones provide a platform for spatiotemporal coupling of mismatch detection to DNA replication von Lenhart, Justin S., Sharma, Anushi, Hingorani, Manju M., Simmons, Lyle A.

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