Modulation of gene expression in heart and liver of hibernating black bears (Ursus americanus) von Fedorov, Vadim B, Goropashnaya, Anna V, Tøien, Øivind, Stewart, Nathan C, Chang, Celia, Wang, Haifang, Yan, Jun, Showe, Louise C, Showe, Michael K, Barnes, Brian M

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Naïve Bayes for microRNA target predictions—machine learning for microRNA targets von Yousef, Malik, Jung, Segun, Kossenkov, Andrew V., Showe, Louise C., Showe, Michael K.

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Combining multi-species genomic data for microRNA identification using a Naïve Bayes classifier von Yousef, Malik, Nebozhyn, Michael, Shatkay, Hagit, Kanterakis, Stathis, Showe, Louise C., Showe, Michael K.

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Comparative functional genomics of adaptation to muscular disuse in hibernating mammals von Fedorov, Vadim B., Goropashnaya, Anna V., Stewart, Nathan C., Tøien, Øivind, Chang, Celia, Wang, Haifang, Yan, Jun, Showe, Louise C., Showe, Michael K., Barnes, Brian M.

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Recursive cluster elimination (RCE) for classification and feature selection from gene expression data von Yousef, Malik, Jung, Segun, Showe, Louise C, Showe, Michael K

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Genome-wide maps of circulating miRNA biomarkers for ulcerative colitis von Duttagupta, Radha, DiRienzo, Sharon, Jiang, Rong, Bowers, Jessica, Gollub, Jeremy, Kao, Jessica, Kearney, Keith, Rudolph, David, Dawany, Noor B, Showe, Michael K, Stamato, Tom, Getts, Robert C, Jones, Keith W

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Classification and biomarker identification using gene network modules and support vector machines von Yousef, Malik, Ketany, Mohamed, Manevitz, Larry, Showe, Louise C, Showe, Michael K

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Peripheral immune cell gene expression predicts survival of patients with non-small cell lung cancer von Kossenkov, Andrew V, Dawany, Noor, Evans, Tracey L, Kucharczuk, John C, Albelda, Steven M, Showe, Louise C, Showe, Michael K, Vachani, Anil

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Elevated expression of protein biosynthesis genes in liver and muscle of hibernating black bears (Ursus americanus) von Fedorov, Vadim B, Goropashnaya, Anna V, Toien, Oivind, Stewart, Nathan C, Gracey, Andrew Y, Chang, Celia, Qin, Shizhen, Pertea, Geo, Quackenbush, John, Showe, Louise C, Showe, Michael K, Boyer, Bert B, Barnes, Brian M

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Learning from positive examples when the negative class is undetermined--microRNA gene identification von Yousef, Malik, Jung, Segun, Showe, Louise C, Showe, Michael K

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A 10-Gene Classifier for Distinguishing Head and Neck Squamous Cell Carcinoma and Lung Squamous Cell Carcinoma von VACHANI, Anil, NEBOZHYN, Michael, LITZKY, Leslie A, KUCHARCZUK, John, KAISER, Larry R, MARRON, J. Stephen, SHOWE, Michael K, ALBELDA, Steven M, SHOWE, Louise C, SINGHAL, Sunil, ALILA, Linda, WAKEAM, Elliot, MUSCHEL, Ruth, POWELL, Charles A, GAFFNEY, Patrick, SINGH, Bhuvanesh, BROSE, Marcia S

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Preservation of bone mass and structure in hibernating black bears (Ursus americanus) through elevated expression of anabolic genes von Fedorov, Vadim B, Goropashnaya, Anna V, Tøien, Øivind, Stewart, Nathan C, Chang, Celia, Wang, Haifang, Yan, Jun, Showe, Louise C, Showe, Michael K, Donahue, Seth W, Barnes, Brian M

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Gene expression profiles in peripheral blood mononuclear cells can distinguish patients with non-small cell lung cancer from patients with nonmalignant lung disease von Showe, Michael K, Vachani, Anil, Kossenkov, Andrew V, Yousef, Malik, Nichols, Calen, Nikonova, Elena V, Chang, Celia, Kucharczuk, John, Tran, Bao, Wakeam, Elliot, Yie, Ting An, Speicher, David, Rom, William N, Albelda, Steven, Showe, Louise C

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A Gene Expression Classifier from Whole Blood Distinguishes Benign from Malignant Lung Nodules Detected by Low-Dose CT von Kossenkov, Andrew V, Qureshi, Rehman, Dawany, Noor B, Wickramasinghe, Jayamanna, Liu, Qin, Majumdar, R Sonali, Chang, Celia, Widura, Sandy, Kumar, Trisha, Horng, Wen-Hwai, Konnisto, Eric, Criner, Gerard, Tsay, Jun-Chieh J, Pass, Harvey, Yendamuri, Sai, Vachani, Anil, Bauer, Thomas, Nam, Brian, Rom, William N, Showe, Michael K, Showe, Louise C

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Analysis of genomic targets reveals complex functions of MYC von Patel, Jagruti H., Loboda, Andrey P., Showe, Michael K., Showe, Louise C., McMahon, Steven B.

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Infection of U937 Monocytic Cells with Chlamydia pneumoniae Induces Extensive Changes in Host Cell Gene Expression von Virok, Dezso, Loboda, Andrey, Kari, Laszlo, Nebozhyn, Michael, Chang, Celia, Nichols, Calen, Endresz, Valeria, Gonczol, Eva, Berencsi, Klara, Showe, Michael K., Showe, Louise C.

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Classification and prediction of survival in patients with the leukemic phase of cutaneous T cell lymphoma von Kari, Laszlo, Loboda, Andrey, Nebozhyn, Michael, Rook, Alain H, Vonderheid, Eric C, Nichols, Calen, Virok, Dezso, Chang, Celia, Horng, Wen-Hwai, Johnston, James, Wysocka, Maria, Showe, Michael K, Showe, Louise C

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Resection of Non―Small Cell Lung Cancers Reverses Tumor-Induced Gene Expression Changes in the Peripheral Immune System von KOSSENKOV, Andrew V, VACHANI, Anil, CELIA CHANG, NICHOLS, Calen, BILLOUIN, Shere, WENHWAI HORNG, ROM, William N, ALBELDA, Steven M, SHOWE, Michael K, SHOWE, Louise C

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The peripheral immune response and lung cancer prognosis von Showe, Michael K., Kossenkov, Andrew V., Showe, Louise C.

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Quantitative PCR on 5 genes reliably identifies CTCL patients with 5% to 99% circulating tumor cells with 90% accuracy von Nebozhyn, Michael, Loboda, Andrey, Kari, Laszlo, Rook, Alain H., Vonderheid, Eric C., Lessin, Stuart, Berger, Carole, Edelson, Richard, Nichols, Calen, Yousef, Malik, Gudipati, Lalitha, Shang, Meiling, Showe, Michael K., Showe, Louise C.

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