A high-performance computing toolset for relatedness and principal component analysis of SNP data von XIUWEN ZHENG, LEVINE, David, SHEN, Jess, GOGARTEN, Stephanie M, LAURIE, Cathy, WEIR, Bruce S

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Single-cell transcriptomes of the regenerating intestine reveal a revival stem cell von Ayyaz, Arshad, Kumar, Sandeep, Sangiorgi, Bruno, Ghoshal, Bibaswan, Gosio, Jessica, Ouladan, Shaida, Fink, Mardi, Barutcu, Seda, Trcka, Daniel, Shen, Jess, Chan, Kin, Wrana, Jeffrey L., Gregorieff, Alex

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A multiplexed, next generation sequencing platform for high-throughput detection of SARS-CoV-2 von Aynaud, Marie-Ming, Hernandez, J. Javier, Barutcu, Seda, Braunschweig, Ulrich, Chan, Kin, Pearson, Joel D., Trcka, Daniel, Prosser, Suzanna L., Kim, Jaeyoun, Barrios-Rodiles, Miriam, Jen, Mark, Song, Siyuan, Shen, Jess, Bruce, Christine, Hazlett, Bryn, Poutanen, Susan, Attisano, Liliana, Bremner, Rod, Blencowe, Benjamin J., Mazzulli, Tony, Han, Hong, Pelletier, Laurence, Wrana, Jeffrey L.

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GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies von GOGARTEN, Stephanie M, BHANGALE, Tushar, NELSON, Sarah C, RICE, Kenneth, SHEN, Jess, SWARNKAR, Rohit, WEIR, Bruce S, LAURIE, Cathy C, CONOMOS, Matthew P, LAURIE, Cecelia A, MCHUGH, Caitlin P, PAINTER, Ian, XIUWEN ZHENG, CROSSLIN, David R, LEVINE, David, LUMLEY, Thomas

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Next-generation RNA Sequencing of Archival Formalin-fixed Paraffin-embedded Urothelial Bladder Cancer von Liu, Yu, Noon, Aidan P, Aguiar Cabeza, Eduardo, Shen, Jess, Kuk, Cynthia, Ilczynski, Christine, Ni, Ruoyu, Sukhu, Balram, Chan, Kin, Barbosa-Morais, Nuno L, Hermanns, Thomas, Blencowe, Benjamin J, Azad, Azar, van der Kwast, Theodorus H, Catto, James W.F, Zlotta, Alexandre R, Wrana, Jeffrey L

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Evaluating Genetic Risk for Prostate Cancer among Japanese and Latinos von LONA CHENG, CHEN, Gary K, MIREL, Daniel B, TAKAHASHI, Atsushi, KUBO, Michiaki, NAKAMURA, Yusuke, AMIN AL OLAMA, Ali, BENLLOCH, Sara, DONOVAN, Jenny L, GUY, Michelle, HAMDY, Freddie C, KOTE-JARAI, Zsofia, NAKAGAWA, Hidewaki, NEAL, David E, WILKENS, Lynne R, MONROE, Kristine R, STRAM, Daniel O, MUIR, Kenneth, EELES, Rosalind A, EASTON, Douglas F, KOLONEL, Laurence N, HENDERSON, Brian E, LE MARCHAND, Loïc, JING HE, HAIMAN, Christopher A, WAN, Peggy, LAURIE, Cathy C, SHEN, Jess, XIN SHENG, POOLER, Loreall C, CRENSHAW, Andrew T

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Abstract IA25: Adult deletion of Lats1/2 leads to sarcomatoid renal cell carcinoma von Reginensi, Antoine, Jain, Sanjay, Humphreys, Benjamin, Shen, Jess, Hodzic, Didier, Wrana, Jeff, McNeill, Helen

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Detectable clonal mosaicism from birth to old age and its relationship to cancer von Laurie, Cathy C, Laurie, Cecelia A, Rice, Kenneth, Doheny, Kimberly F, Zelnick, Leila R, McHugh, Caitlin P, Ling, Hua, Hetrick, Kurt N, Pugh, Elizabeth W, Amos, Chris, Wei, Qingyi, Wang, Li-e, Lee, Jeffrey E, Barnes, Kathleen C, Hansel, Nadia N, Mathias, Rasika, Daley, Denise, Beaty, Terri H, Scott, Alan F, Ruczinski, Ingo, Scharpf, Rob B, Bierut, Laura J, Hartz, Sarah M, Landi, Maria Teresa, Freedman, Neal D, Goldin, Lynn R, Ginsburg, David, Li, Jun, Desch, Karl C, Strom, Sara S, Blot, William J, Signorello, Lisa B, Ingles, Sue A, Chanock, Stephen J, Berndt, Sonja I, Le Marchand, Loic, Henderson, Brian E, Monroe, Kristine R, Heit, John A, de Andrade, Mariza, Armasu, Sebastian M, Regnier, Cynthia, Lowe, William L, Hayes, M Geoffrey, Marazita, Mary L, Feingold, Eleanor, Murray, Jeffrey C, Melbye, Mads, Feenstra, Bjarke, Kang, Jae H, Wiggs, Janey L, Jarvik, Gail P, McDavid, Andrew N, Seshan, Venkatraman E, Mirel, Daniel B, Crenshaw, Andrew, Sharopova, Nataliya, Wise, Anastasia, Shen, Jess, Crosslin, David R, Levine, David M, Zheng, Xiuwen, Udren, Jenna I, Bennett, Siiri, Nelson, Sarah C, Gogarten, Stephanie M, Conomos, Matthew P, Heagerty, Patrick, Manolio, Teri, Pasquale, Louis R, Haiman, Christopher A, Caporaso, Neil, Weir, Bruce S

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Identification of Two Genetic Loci Associated with Leukopenia after Chemotherapy in Breast Cancer Patients von Fasching, Peter. A., Liu, Duan, Scully, Steve, Ingle, James N., Lyra, Paulo C., Rack, Brigitte, Hein, Alexander, Ekici, Arif B., Reis, Andre, Schneeweiss, Andreas, Tesch, Hans, Fehm, Tanja N., Heinrich, Georg, Beckmann, Matthias W., Ruebner, Matthias, Huebner, Hanna, Lambrechts, Diether, Madden, Ebony, Shen, Jess, Romm, Jane, Doheny, Kim, Jenkins, Gregory D., Carlson, Erin E., Li, Liang, Fridley, Brooke L., Cunningham, Julie M., Janni, Wolfgang, Monteiro, Alvaro N.A., Schaid, Daniel J., Häberle, Lothar, Weinshilboum, Richard M., Wang, Liewei

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Identification of Two Genetic Loci Associated with Leukopenia after Chemotherapy in Patients with Breast Cancer von Fasching, Peter A, Liu, Duan, Scully, Steve, Ingle, James N, Lyra, Paulo C, Rack, Brigitte, Hein, Alexander, Ekici, Arif B, Reis, Andre, Schneeweiss, Andreas, Tesch, Hans, Fehm, Tanja N, Heinrich, Georg, Beckmann, Matthias W, Ruebner, Matthias, Huebner, Hanna, Lambrechts, Diether, Madden, Ebony, Shen, Jess, Romm, Jane, Doheny, Kim, Jenkins, Gregory D, Carlson, Erin E, Li, Liang, Fridley, Brooke L, Cunningham, Julie M, Janni, Wolfgang, Monteiro, Alvaro N.A, Schaid, Daniel J, Haberle, Lothar, Weinshilboum, Richard M, Wang, Liewei

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Using cluster ensemble and validation to identify subtypes of pervasive developmental disorders von Shen, Jess J, Lee, Phil-Hyoun, Holden, Jeanette J A, Shatkay, Hagit

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Identification of Two Genetic Loci Associated with Leukopenia after Chemotherapy in Patients with Breast Cancer von Fasching, Peter A, Liu, Duan, Scully, Steve, Ingle, James N, Lyra, Paulo C, Rack, Brigitte, Hein, Alexander, Ekici, Arif B, Reis, Andre, Schneeweiss, Andreas, Tesch, Hans, Fehm, Tanja N, Heinrich, Georg, Beckmann, Matthias W, Ruebner, Matthias, Huebner, Hanna, Lambrechts, Diether, Madden, Ebony, Shen, Jess, Romm, Jane, Doheny, Kim, Jenkins, Gregory D, Carlson, Erin E, Li, Liang, Fridley, Brooke L, Cunningham, Julie M, Janni, Wolfgang, Monteiro, Alvaro N A, Schaid, Daniel J, Häberle, Lothar, Weinshilboum, Richard M, Wang, Liewei

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Genetics of the thrombomodulin-endothelial cell protein C receptor system and the risk of early-onset ischemic stroke von Cole, John W, Xu, Huichun, Ryan, Kathleen, Jaworek, Thomas, Dueker, Nicole, McArdle, Patrick, Gaynor, Brady, Cheng, Yu-Ching, O'Connell, Jeffrey, Bevan, Steve, Malik, Rainer, Ahmed, Naveed Uddin, Amouyel, Philippe, Anjum, Sheraz, Bis, Joshua C, Crosslin, David, Danesh, John, Engelter, Stefan T, Fornage, Myriam, Frossard, Philippe, Gieger, Christian, Giese, Anne-Katrin, Grond-Ginsbach, Caspar, Ho, Weang Kee, Holliday, Elizabeth, Hopewell, Jemma, Hussain, M, Iqbal, W, Jabeen, S, Jannes, Jim, Kamal, Ayeesha, Kamatani, Yoichiro, Kanse, Sandip, Kloss, Manja, Lathrop, Mark, Leys, Didier, Lindgren, Arne, Longstreth, Jr, W T, Mahmood, Khalid, Meisinger, Christa, Metso, Tiina M, Mosley, Jr, Thomas, Müller-Nurasyid, Martina, Norrving, Bo, Parati, Eugenio, Peters, Annette, Pezzini, Alessandro, Quereshi, I, Rasheed, Asif, Rauf, A, Salam, T, Shen, Jess, Słowik, Agnieszka, Stanne, Tara, Strauch, Konstantin, Tatlisumak, Turgut, Thijs, Vincent N, Tiedt, Steffen, Traylor, Matthew, Waldenberger, Melanie, Walters, Matthew, Zhao, Wei, Boncoraglio, Giorgio, Debette, Stéphanie, Jern, Christina, Levi, Christopher, Markus, Hugh, Meschia, James, Rolfs, Arndt, Rothwell, Peter, Saleheen, Danish, Seshadri, Sudha, Sharma, Pankaj, Sudlow, Cathie, Worrall, Bradford, Stine, O Colin, Kittner, Steven J, Mitchell, Braxton D

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RNA-sequencing to identify three different molecular grades and immune checkpoint cascades with distinct clinical behaviour in NMIBC von Chandrasekar, Thenappan, Zlotta, Alexandre, Shen, Jess, Noon, Aidan, Jiang, Haiyan, Erlich, Annette, Kuk, Cynthia, Ni, Ruoyu, Sukhu, Balram, Chan, Kin, Roupret, Morgan, Seisen, Thomas, Comperat, Eva, Sweet, Joan, Kulkarni, Girish S., Fleshner, Neil Eric, Azad, Azar, van der Kwast, Theodorus, Wrana, Jeff L

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Genetics of the thrombomodulin-endothelial cell protein C receptor system and the risk of early-onset ischemic stroke von Cole, John W, Xu, Huichun, Ryan, Kathleen, Jaworek, Thomas, Dueker, Nicole, McArdle, Patrick, Gaynor, Brady, Cheng, Yu-Ching, O'Connell, Jeffrey, Bevan, Steve, Malik, Rainer, Ahmed, Naveed Uddin, Amouyel, Philippe, Anjum, Sheraz, Bis, Joshua C, Crosslin, David, Danesh, John, Engelter, Stefan T, Fornage, Myriam, Frossard, Philippe, Gieger, Christian, Giese, Anne-Katrin, Grond-Ginsbach, Caspar, Ho, Weang Kee, Holliday, Elizabeth, Hopewell, Jemma, Hussain, M, Iqbal, W, Jabeen, S, Jannes, Jim, Kamal, Ayeesha, Kamatani, Yoichiro, Kanse, Sandip, Kloss, Manja, Lathrop, Mark, Leys, Didier, Lindgren, Arne, Longstreth, W.T, Mahmood, Khalid, Meisinger, Christa, Metso, Tiina M, Mosley, Thomas, Mueller-Nurasyid, Martina, Norrving, Bo, Parati, Eugenio, Peters, Annette, Pezzini, Alessandro, Quereshi, I, Rasheed, Asif, Rauf, A, Salam, T, Shen, Jess, Slowik, Agnieszka, Stanne, Tara, Strauch, Konstantin, Tatlisumak, Turgut, Thijs, Vincent N, Tiedt, Steffen, Traylor, Matthew, Waldenberger, Melanie, Walters, Matthew, Zhao, Wei, Boncoraglio, Giorgio, Debette, Stephanie, Jern, Christina, Levi, Christopher, Markus, Hugh, Meschia, James, Rolfs, Arndt, Rothwell, Peter, Saleheen, Danish, Seshadri, Sudha, Sharma, Pankaj, Sudlow, Cathie, Worrall, Bradford, Stine, O. Colin, Kittner, Steven J, Mitchell, Braxton D

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PD11-09 MOLECULAR TUMOR GRADING OF NON MUSCLE INVASIVE BLADDER CANCER BASED ON WHOLE TRANSCRIPTOME ANALYSIS von Shen, Jess, Noon, Aidan P, Aguiar Cabeza, Eduardo, Kuk, Cynthia, Ilczynski, Christine, Ni, Ruoyu, Sukhu, Balram, Chan, Kim, Gunaratne, Adrian, Erlich, Annette, Cremer, Chris, Morris, Quaid, Barbosa-Morais, Nuno L, Fleshner, Neil, Kulkarni, Girish, Blencowe, Benjamin J, Azad, Azar, van der Kwast, Theodorus H, Zlotta, Alexandre R, Wrana, Jeffrey

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Molecular tumor grading of non muscle invasive bladder cancer based on whole transcriptome analysis von Shen, Jess, Noon, Aidan, LIU, Yu, Kuk, Cynthia, Ilczynski, C, Ni, R, Sukhu, B, Chan, K, Gunaratne, Adrian, Erlich, Annette, Cremer, Chris, Morris, Quaid, Barbosa-Morais, Nuno L, Fleshner, Neil Eric, Kulkarni, Girish S., Blencowe, Ben, Azad, Azar, van der Kwast, Theodorus, Zlotta, Alexandre, Wrana, Jeff L

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Next-generation RNA sequencing of archival formalin-fixed paraffin-embedded urothelial bladder cancer von Liu, Yu, Noon, Aidan P, Aguiar Cabeza, Eduardo, Shen, Jess, Kuk, Cynthia, Ilczynski, Christine, Ni, Ruoyu, Sukhu, Balram, Chan, Kin, Barbosa-Morais, Nuno L, Hermanns, Thomas, Blencowe, Benjamin J, Azad, Azar, van der Kwast, Theodorus H, Catto, James W F, Zlotta, Alexandre R, Wrana, Jeffrey L

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Binding Specificity of Multi-Labeled PNA Probes Studied by Single Molecule Mapping von Protozanova, Ekaterina, Wang, Ting, Uehara, Kyoko, Safranovitch, Misha, Mahabir, Rhea, Shen, Jess, Chennagiri, Niru, Cameron, Douglas B., Gilmanshin, Rudolf

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Genome-wide association analysis of ischemic stroke in young adults von Cheng, Yu-Ching, O'Connell, Jeffrey R, Cole, John W, Stine, O Colin, Dueker, Nicole, McArdle, Patrick F, Sparks, Mary J, Shen, Jess, Laurie, Cathy C, Nelson, Sarah, Doheny, Kimberly F, Ling, Hua, Pugh, Elizabeth W, Brott, Thomas G, Brown, Jr, Robert D, Meschia, James F, Nalls, Michael, Rich, Stephen S, Worrall, Bradford, Anderson, Christopher D, Biffi, Alessandro, Cortellini, Lynelle, Furie, Karen L, Rost, Natalia S, Rosand, Jonathan, Manolio, Teri A, Kittner, Steven J, Mitchell, Braxton D

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