Genome-wide atlas of transcription during maize development von Sekhon, Rajandeep S, Lin, Haining, Childs, Kevin L, Hansey, Candice N, Robin Buell, C, de Leon, Natalia, Kaeppler, Shawn M

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Shovelomics: high throughput phenotyping of maize (Zea mays L.) root architecture in the field von Trachsel, Samuel, Kaeppler, Shawn M, Brown, Kathleen M, Lynch, Jonathan P

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Comparative population genomics of maize domestication and improvement von Hufford, Matthew B, Xu, Xun, van Heerwaarden, Joost, Pyhäjärvi, Tanja, Chia, Jer-Ming, Cartwright, Reed A, Elshire, Robert J, Glaubitz, Jeffrey C, Guill, Kate E, Kaeppler, Shawn M, Lai, Jinsheng, Morrell, Peter L, Shannon, Laura M, Song, Chi, Springer, Nathan M, Swanson-Wagner, Ruth A, Tiffin, Peter, Wang, Jun, Zhang, Gengyun, Doebley, John, McMullen, Michael D, Ware, Doreen, Buckler, Edward S, Yang, Shuang, Ross-Ibarra, Jeffrey

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Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization von Li, Faqiang, Chung, Taijoon, Pennington, Janice G., Federico, Maria L., Kaeppler, Heidi F., Kaeppler, Shawn M., Otegui, Marisa S., Vierstra, Richard D.

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Genome-wide association analysis reveals new targets for carotenoid biofortification in maize von Suwarno, Willy B., Pixley, Kevin V., Palacios-Rojas, Natalia, Kaeppler, Shawn M., Babu, Raman

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Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays von Sekhon, Rajandeep S, Briskine, Roman, Hirsch, Candice N, Myers, Chad L, Springer, Nathan M, Buell, C Robin, de Leon, Natalia, Kaeppler, Shawn M

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Estimation of Maize Yield and Flowering Time Using Multi-Temporal UAV-Based Hyperspectral Data von Fan, Jiahao, Zhou, Jing, Wang, Biwen, de Leon, Natalia, Kaeppler, Shawn M., Lima, Dayane C., Zhang, Zhou

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Effects of endosperm type and storage length of whole-plant corn silage on nitrogen fraction, fermentation products, zein profile, and starch digestibility von Varela, José, Ferraretto, Luiz F, Kaeppler, Shawn M, de León, Natalia

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An Expanded Maize Gene Expression Atlas based on RNA Sequencing and its Use to Explore Root Development von Stelpflug, Scott C., Sekhon, Rajandeep S., Vaillancourt, Brieanne, Hirsch, Candice N., Buell, C. Robin, Leon, Natalia, Kaeppler, Shawn M.

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Marker density and read depth for genotyping populations using genotyping-by-sequencing von Beissinger, Timothy M, Hirsch, Candice N, Sekhon, Rajandeep S, Foerster, Jillian M, Johnson, James M, Muttoni, German, Vaillancourt, Brieanne, Buell, C Robin, Kaeppler, Shawn M, de Leon, Natalia

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A robust, high‐throughput method for computing maize ear, cob, and kernel attributes automatically from images von Miller, Nathan D., Haase, Nicholas J., Lee, Jonghyun, Kaeppler, Shawn M., Leon, Natalia, Spalding, Edgar P.

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Leveraging data from the Genomes-to-Fields Initiative to investigate genotype-by-environment interactions in maize in North America von Lopez-Cruz, Marco, Aguate, Fernando M., Washburn, Jacob D., de Leon, Natalia, Kaeppler, Shawn M., Lima, Dayane Cristina, Tan, Ruijuan, Thompson, Addie, De La Bretonne, Laurence Willard, de los Campos, Gustavo

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Genome-wide association analysis of stalk biomass and anatomical traits in maize von Mazaheri, Mona, Heckwolf, Marlies, Vaillancourt, Brieanne, Gage, Joseph L, Burdo, Brett, Heckwolf, Sven, Barry, Kerrie, Lipzen, Anna, Ribeiro, Camila Bastos, Kono, Thomas J Y, Kaeppler, Heidi F, Spalding, Edgar P, Hirsch, Candice N, Robin Buell, C, de Leon, Natalia, Kaeppler, Shawn M

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Genetic Perturbation of the Maize Methylome von Li, Qing, Eichten, Steven R., Hermanson, Peter J., Zaunbrecher, Virginia M., Song, Jawon, Wendt, Jennifer, Rosenbaum, Heidi, Madzima, Thelma F., Sloan, Amy E., Huang, Ji, Burgess, Daniel L., Richmond, Todd A., McGinnis, Karen M., Meeley, Robert B., Danilevskaya, Olga N., Vaughn, Matthew W., Kaeppler, Shawn M., Jeddeloh, Jeffrey A., Springer, Nathan M.

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Assessing the Viability of Recovery of Hydroxycinnamic Acids from Lignocellulosic Biorefinery Alkaline Pretreatment Waste Streams von Karlen, Steven D., Fasahati, Peyman, Mazaheri, Mona, Serate, Jose, Smith, Rebecca A., Sirobhushanam, Sirisha, Chen, Mingjie, Tymokhin, Vitaliy I., Cass, Cynthia L., Liu, Sarah, Padmakshan, Dharshana, Xie, Dan, Zhang, Yaoping, McGee, Mick A., Russell, Jason D., Coon, Joshua J., Kaeppler, Heidi F., Leon, Natalia, Maravelias, Christos T., Runge, Troy M., Kaeppler, Shawn M., Sedbrook, John C., Ralph, John

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Chromosome-level genome assembly of a regenerable maize inbred line A188 von Lin, Guifang, He, Cheng, Zheng, Jun, Koo, Dal-Hoe, Le, Ha, Zheng, Huakun, Tamang, Tej Man, Lin, Jinguang, Liu, Yan, Zhao, Mingxia, Hao, Yangfan, McFraland, Frank, Wang, Bo, Qin, Yang, Tang, Haibao, McCarty, Donald R, Wei, Hairong, Cho, Myeong-Je, Park, Sunghun, Kaeppler, Heidi, Kaeppler, Shawn M, Liu, Yunjun, Springer, Nathan, Schnable, Patrick S, Wang, Guoying, White, Frank F, Liu, Sanzhen

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Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes von Salvo, Stella A G D, Hirsch, Candice N, Buell, C Robin, Kaeppler, Shawn M, Kaeppler, Heidi F

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Consistent and heritable alterations of DNA methylation are induced by tissue culture in maize von Stelpflug, Scott C, Eichten, Steven R, Hermanson, Peter J, Springer, Nathan M, Kaeppler, Shawn M

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Genotype-by-environment interactions affecting heterosis in maize von Li, Zhi, Coffey, Lisa, Garfin, Jacob, Miller, Nathan D, White, Michael R, Spalding, Edgar P, de Leon, Natalia, Kaeppler, Shawn M, Schnable, Patrick S, Springer, Nathan M, Hirsch, Candice N

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Genetic Architecture of Maize Stalk Strength von Peiffer, Jason A, Flint-Garcia, Sherry A, De Leon, Natalia, McMullen, Michael D, Kaeppler, Shawn M, Buckler, Edward S, De Smet, Ive

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