Advancements in Next-Generation Sequencing von Levy, Shawn E, Myers, Richard M

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The Pan-ErbB Negative Regulator Lrig1 Is an Intestinal Stem Cell Marker that Functions as a Tumor Suppressor von Powell, Anne E., Wang, Yang, Li, Yina, Poulin, Emily J., Means, Anna L., Washington, Mary K., Higginbotham, James N., Juchheim, Alwin, Prasad, Nripesh, Levy, Shawn E., Guo, Yan, Shyr, Yu, Aronow, Bruce J., Haigis, Kevin M., Franklin, Jeffrey L., Coffey, Robert J.

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A Molecular Genetic Basis Explaining Altered Bacterial Behavior in Space von Zea, Luis, Prasad, Nripesh, Levy, Shawn E, Stodieck, Louis, Jones, Angela, Shrestha, Shristi, Klaus, David

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Islet Microenvironment, Modulated by Vascular Endothelial Growth Factor-A Signaling, Promotes β Cell Regeneration von Brissova, Marcela, Aamodt, Kristie, Brahmachary, Priyanka, Prasad, Nripesh, Hong, Ji-Young, Dai, Chunhua, Mellati, Mahnaz, Shostak, Alena, Poffenberger, Greg, Aramandla, Radhika, Levy, Shawn E., Powers, Alvin C.

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Next-Generation Sequencing Strategies von Levy, Shawn E, Boone, Braden E

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α Cell Function and Gene Expression Are Compromised in Type 1 Diabetes von Brissova, Marcela, Haliyur, Rachana, Saunders, Diane, Shrestha, Shristi, Dai, Chunhua, Blodgett, David M., Bottino, Rita, Campbell-Thompson, Martha, Aramandla, Radhika, Poffenberger, Gregory, Lindner, Jill, Pan, Fong Cheng, von Herrath, Matthias G., Greiner, Dale L., Shultz, Leonard D., Sanyoura, May, Philipson, Louis H., Atkinson, Mark, Harlan, David M., Levy, Shawn E., Prasad, Nripesh, Stein, Roland, Powers, Alvin C.

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Analysis of error profiles in deep next-generation sequencing data von Ma, Xiaotu, Shao, Ying, Tian, Liqing, Flasch, Diane A, Mulder, Heather L, Edmonson, Michael N, Liu, Yu, Chen, Xiang, Newman, Scott, Nakitandwe, Joy, Li, Yongjin, Li, Benshang, Shen, Shuhong, Wang, Zhaoming, Shurtleff, Sheila, Robison, Leslie L, Levy, Shawn, Easton, John, Zhang, Jinghui

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Genetic and Functional Drivers of Diffuse Large B Cell Lymphoma von Reddy, Anupama, Zhang, Jenny, Davis, Nicholas S., Moffitt, Andrea B., Love, Cassandra L., Waldrop, Alexander, Leppa, Sirpa, Pasanen, Annika, Meriranta, Leo, Karjalainen-Lindsberg, Marja-Liisa, Nørgaard, Peter, Pedersen, Mette, Gang, Anne O., Høgdall, Estrid, Heavican, Tayla B., Lone, Waseem, Iqbal, Javeed, Qin, Qiu, Li, Guojie, Kim, So Young, Healy, Jane, Richards, Kristy L., Fedoriw, Yuri, Bernal-Mizrachi, Leon, Koff, Jean L., Staton, Ashley D., Flowers, Christopher R., Paltiel, Ora, Goldschmidt, Neta, Calaminici, Maria, Clear, Andrew, Gribben, John, Nguyen, Evelyn, Czader, Magdalena B., Ondrejka, Sarah L., Collie, Angela, Hsi, Eric D., Tse, Eric, Au-Yeung, Rex K.H., Kwong, Yok-Lam, Srivastava, Gopesh, Choi, William W.L., Evens, Andrew M., Pilichowska, Monika, Sengar, Manju, Reddy, Nishitha, Li, Shaoying, Chadburn, Amy, Gordon, Leo I., Jaffe, Elaine S., Levy, Shawn, Rempel, Rachel, Tzeng, Tiffany, Happ, Lanie E., Dave, Tushar, Rajagopalan, Deepthi, Datta, Jyotishka, Dunson, David B., Dave, Sandeep S.

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A cell-based systems biology assessment of human blood to monitor immune responses after influenza vaccination von Hoek, Kristen L, Samir, Parimal, Howard, Leigh M, Niu, Xinnan, Prasad, Nripesh, Galassie, Allison, Liu, Qi, Allos, Tara M, Floyd, Kyle A, Guo, Yan, Shyr, Yu, Levy, Shawn E, Joyce, Sebastian, Edwards, Kathryn M, Link, Andrew J

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De novo gene mutations highlight patterns of genetic and neural complexity in schizophrenia von Xu, Bin, Ionita-Laza, Iuliana, Roos, J Louw, Boone, Braden, Woodrick, Scarlet, Sun, Yan, Levy, Shawn, Gogos, Joseph A, Karayiorgou, Maria

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Cell-Based Systems Biology Analysis of Human AS03-Adjuvanted H5N1 Avian Influenza Vaccine Responses: A Phase I Randomized Controlled Trial von Howard, Leigh M, Hoek, Kristen L, Goll, Johannes B, Samir, Parimal, Galassie, Allison, Allos, Tara M, Niu, Xinnan, Gordy, Laura E, Creech, C Buddy, Prasad, Nripesh, Jensen, Travis L, Hill, Heather, Levy, Shawn E, Joyce, Sebastian, Link, Andrew J, Edwards, Kathryn M

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Age-dependent human β cell proliferation induced by glucagon-like peptide 1 and calcineurin signaling von Dai, Chunhua, Hang, Yan, Shostak, Alena, Poffenberger, Greg, Hart, Nathaniel, Prasad, Nripesh, Phillips, Neil, Levy, Shawn E, Greiner, Dale L, Shultz, Leonard D, Bottino, Rita, Kim, Seung K, Powers, Alvin C

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The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity von Alam, Samer G., Zhang, Qiao, Prasad, Nripesh, Li, Yuan, Chamala, Srikar, Kuchibhotla, Ram, KC, Birendra, Aggarwal, Varun, Shrestha, Shristi, Jones, Angela L., Levy, Shawn E., Roux, Kyle J., Nickerson, Jeffrey A., Lele, Tanmay P.

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Comprehensive benchmarking and ensemble approaches for metagenomic classifiers von McIntyre, Alexa B R, Ounit, Rachid, Afshinnekoo, Ebrahim, Prill, Robert J, Hénaff, Elizabeth, Alexander, Noah, Minot, Samuel S, Danko, David, Foox, Jonathan, Ahsanuddin, Sofia, Tighe, Scott, Hasan, Nur A, Subramanian, Poorani, Moffat, Kelly, Levy, Shawn, Lonardi, Stefano, Greenfield, Nick, Colwell, Rita R, Rosen, Gail L, Mason, Christopher E

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Spaceflight Modifies Escherichia coli Gene Expression in Response to Antibiotic Exposure and Reveals Role of Oxidative Stress Response von Aunins, Thomas R, Erickson, Keesha E, Prasad, Nripesh, Levy, Shawn E, Jones, Angela, Shrestha, Shristi, Mastracchio, Rick, Stodieck, Louis, Klaus, David, Zea, Luis, Chatterjee, Anushree

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A signalling cascade of IL-33 to IL-13 regulates metaplasia in the mouse stomach von Petersen, Christine P, Meyer, Anne R, De Salvo, Carlo, Choi, Eunyoung, Schlegel, Cameron, Petersen, Alec, Engevik, Amy C, Prasad, Nripesh, Levy, Shawn E, Peebles, R Stokes, Pizarro, Theresa T, Goldenring, James R

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Interrupted Glucagon Signaling Reveals Hepatic α Cell Axis and Role for L-Glutamine in α Cell Proliferation von Dean, E. Danielle, Li, Mingyu, Prasad, Nripesh, Wisniewski, Scott N., Von Deylen, Alison, Spaeth, Jason, Maddison, Lisette, Botros, Anthony, Sedgeman, Leslie R., Bozadjieva, Nadejda, Ilkayeva, Olga, Coldren, Anastasia, Poffenberger, Greg, Shostak, Alena, Semich, Michael C., Aamodt, Kristie I., Phillips, Neil, Yan, Hai, Bernal-Mizrachi, Ernesto, Corbin, Jackie D., Vickers, Kasey C., Levy, Shawn E., Dai, Chunhua, Newgard, Christopher, Gu, Wei, Stein, Roland, Chen, Wenbiao, Powers, Alvin C.

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Artificial intelligence enables comprehensive genome interpretation and nomination of candidate diagnoses for rare genetic diseases von De La Vega, Francisco M, Chowdhury, Shimul, Moore, Barry, Frise, Erwin, McCarthy, Jeanette, Hernandez, Edgar Javier, Wong, Terence, James, Kiely, Guidugli, Lucia, Agrawal, Pankaj B, Genetti, Casie A, Brownstein, Catherine A, Beggs, Alan H, Löscher, Britt-Sabina, Franke, Andre, Boone, Braden, Levy, Shawn E, Õunap, Katrin, Pajusalu, Sander, Huentelman, Matt, Ramsey, Keri, Naymik, Marcus, Narayanan, Vinodh, Veeraraghavan, Narayanan, Billings, Paul, Reese, Martin G, Yandell, Mark, Kingsmore, Stephen F

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Progressive increase in mtDNA 3243A>G heteroplasmy causes abrupt transcriptional reprogramming von Picard, Martin, Zhang, Jiangwen, Hancock, Saege, Derbeneva, Olga, Golhar, Ryan, Golik, Pawel, O'Hearn, Sean, Levy, Shawn, Potluri, Prasanth, Lvova, Maria, Davila, Antonio, Lin, Chun Shi, Perin, Juan Carlos, Rappaport, Eric F, Hakonarson, Hakon, Trounce, Ian A, Procaccio, Vincent, Wallace, Douglas C

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Connecting the Dots: Therapy-Induced Senescence and a Tumor-Suppressive Immune Microenvironment von Vilgelm, Anna E, Johnson, C Andrew, Prasad, Nripesh, Yang, Jinming, Chen, Sheau-Chiann, Ayers, Gregory D, Pawlikowski, Jeff S, Raman, Dayanidhi, Sosman, Jeffrey A, Kelley, Mark, Ecsedy, Jeffrey A, Shyr, Yu, Levy, Shawn E, Richmond, Ann

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