Transmission of a common intestinal neoplasm in zebrafish by cohabitation von Burns, A R, Watral, V, Sichel, S, Spagnoli, S, Banse, A V, Mittge, E, Sharpton, T J, Guillemin, K, Kent, M L

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Reducing gut microbiome-driven adipose tissue inflammation alleviates metabolic syndrome von Newman, N. K., Zhang, Y., Padiadpu, J., Miranda, C. L., Magana, A. A., Wong, C. P., Hioki, K. A., Pederson, J. W., Li, Z., Gurung, M., Bruce, A. M., Brown, K., Bobe, G., Sharpton, T. J., Shulzhenko, N., Maier, C. S., Stevens, J. F., Gombart, A. F., Morgun, A.

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Post-mortem Sporulation of Ceratomyxa shasta (Myxozoa) After Death in Adult Chinook Salmon von Kent, M. L, Soderlund, K, Thomann, Estela, Schreck, C. B, Sharpton, T. J

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Taxonomic and functional assessment using metatranscriptomics reveals the effect of Angus cattle on rumen microbial signatures von Neves, A. L. A., Chen, Y., Cao, K-A Le, Mandal, S., Sharpton, T. J., McAllister, T., Guan, L. L.

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Pseudocapillaria tomentosa in laboratory zebrafish Danio rerio: patterns of infection and dose response von Kent, Michael L, Gaulke, Christopher A, Watral, Virginia, Sharpton, Thomas J

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Additional file 2 of Reducing gut microbiome-driven adipose tissue inflammation alleviates metabolic syndrome von Newman, N. K., Zhang, Y., Padiadpu, J., Miranda, C. L., Magana, A. A., Wong, C. P., Hioki, K. A., Pederson, J. W., Li, Z., Gurung, M., Bruce, A. M., Brown, K., Bobe, G., Sharpton, T. J., Shulzhenko, N., Maier, C. S., Stevens, J. F., Gombart, A. F., Morgun, A.

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Additional file 3 of Reducing gut microbiome-driven adipose tissue inflammation alleviates metabolic syndrome von Newman, N. K., Zhang, Y., Padiadpu, J., Miranda, C. L., Magana, A. A., Wong, C. P., Hioki, K. A., Pederson, J. W., Li, Z., Gurung, M., Bruce, A. M., Brown, K., Bobe, G., Sharpton, T. J., Shulzhenko, N., Maier, C. S., Stevens, J. F., Gombart, A. F., Morgun, A.

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Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy von Zhu, Qiyun, Huang, Shi, Gonzalez, Antonio, McGrath, Imran, McDonald, Daniel, Haiminen, Niina, Armstrong, George, Vázquez-Baeza, Yoshiki, Yu, Julian, Kuczynski, Justin, Sepich-Poore, Gregory D, Swafford, Austin D, Das, Promi, Shaffer, Justin P, Lejzerowicz, Franck, Belda-Ferre, Pedro, Havulinna, Aki S, Méric, Guillaume, Niiranen, Teemu, Lahti, Leo, Salomaa, Veikko, Kim, Ho-Cheol, Jain, Mohit, Inouye, Michael, Gilbert, Jack A, Knight, Rob

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Distinct N and C Cross-Feeding Networks in a Synthetic Mouse Gut Consortium von Pérez Escriva, Pau, Fuhrer, Tobias, Sauer, Uwe

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Metagenomic Sequencing Reveals that the Assembly of Functional Genes and Taxa Varied Highly and Lacked Redundancy in the Earthworm Gut Compared with Soil under Vanadium Stress von Xia, Rong, Shi, Yu, Wang, Xinwei, Wu, Yunling, Sun, Mingming, Hu, Feng

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Longitudinal Profiling of the Macaque Vaginal Microbiome Reveals Similarities to Diverse Human Vaginal Communities von Rhoades, Nicholas S., Hendrickson, Sara M., Gerken, Danielle R., Martinez, Kassandra, Slayden, Ov D., Slifka, Mark K., Messaoudia, Ilhem

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Differential Analysis of Longitudinal Methicillin-Resistant Staphylococcus aureus Colonization in Relation to Microbial Shifts in the Nasal Microbiome of Neonatal Piglets von Patel, Shriram, Vlasblom, Abel A., Verstappen, Koen M., Zomer, Aldert L., Fluit, Ad C., Rogers, Malbert R. C., Wagenaar, Jaap A., Claesson, Marcus J., Duim, Birgitta

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Gut Microbiota and Host Thermoregulation in Response to Ambient Temperature Fluctuations von Khakisahneh, Saeid, Zhang, Xue-Ying, Nouri, Zahra, Wang, De-Hua

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Menopause Is Associated with an Altered Gut Microbiome and Estrobolome, with Implications for Adverse Cardiometabolic Risk in the Hispanic Community Health Study/Study of Latinos von Peters, Brandilyn A, Lin, Juan, Qi, Qibin, Usyk, Mykhaylo, Isasi, Carmen R, Mossavar-Rahmani, Yasmin, Derby, Carol A, Santoro, Nanette, Perreira, Krista M, Daviglus, Martha L, Kominiarek, Michelle A, Cai, Jianwen, Knight, Rob, Burk, Robert D, Kaplan, Robert C

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The Gut Microbiota Communities of Wild Arboreal and Ground-Feeding Tropical Primates Are Affected Differently by Habitat Disturbance von Barelli, Claudia, Albanese, Davide, Stumpf, Rebecca M., Asangba, Abigail, Donati, Claudio, Rovero, Francesco, Hauffe, Heidi C.

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Comprehensive Functional Annotation of Metagenomes and Microbial Genomes Using a Deep Learning-Based Method von Maranga, Mary, Szczerbiak, Pawel, Bezshapkin, Valentyn, Gligorijevic, Vladimir, Chandler, Chris, Bonneau, Richard, Xavier, Ramnik J, Vatanen, Tommi, Kosciolek, Tomasz

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Frequent Occurrence and Metabolic Versatility of Marinifilaceae Bacteria as Key Players in Organic Matter Mineralization in Global Deep Seas von Li, Jianyang, Dong, Chunming, Lai, Qiliang, Wang, Guangyi, Shao, Zongze

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Changes in the Composition of the Gut Microbiota and the Blood Transcriptome in Preterm Infants at Less than 29 Weeks Gestation Diagnosed with Bronchopulmonary Dysplasia von Ryan, Feargal J., Drew, Damian P., Douglas, Chloe, Leong, Lex E. X., Moldovan, Max, Lynn, Miriam, Fink, Naomi, Sribnaia, Anastasia, Penttila, Irmeli, McPhee, Andrew J., Collins, Carmel T., Makrides, Maria, Gibson, Robert A., Rogers, Geraint B., Lynn, David J.

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Dysbiosis of oral microbiome persists after dental treatment-induced remission of periodontal disease and dental caries von Yama, Kazuma, Nishimoto, Yuichiro, Kumagai, Kota, Jo, Ryutaro, Harada, Minori, Maruyama, Yuki, Aita, Yuto, Fujii, Narumi, Inokuchi, Takuya, Kawamata, Ryosuke, Sako, Misato, Ichiba, Yuko, Tsutsumi, Kota, Kimura, Mitsuo, Murakami, Shinnosuke, Kakizawa, Yasushi, Kumagai, Takashi, Yamada, Takuji, Fukuda, Shinji

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Arcobacteraceae are ubiquitous mixotrophic bacteria playing important roles in carbon, nitrogen, and sulfur cycling in global oceans von Li, Jianyang, Xiang, Shizheng, Li, Yufei, Cheng, Ruolin, Lai, Qiliang, Wang, Liping, Li, Guizhen, Dong, Chunming, Shao, Zongze

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