Novel Conserved Genotypes Correspond to Antibiotic Resistance Phenotypes of E. coli Clinical Isolates von Swick, Michelle C, Evangelista, Michael A, Bodine, Truston J, Easton-Marks, Jeremy R, Barth, Patrick, Shah, Minita J, Bormann Chung, Christina A, Stanley, Sarah, McLaughlin, Stephen F, Lee, Clarence C, Sheth, Vrunda, Doan, Quynh, Hamill, Richard J, Steffen, David, Becnel, Lauren B, Sucgang, Richard, Zechiedrich, Lynn

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Correction: Novel Conserved Genotypes Correspond to Antibiotic Resistance Phenotypes of E. coli Clinical Isolates von Swick, Michelle C., Evangelista, Michael A., Bodine, Truston J., Easton-Marks, Jeremy R., Barth, Patrick, Shah, Minita J., Bormann Chung, Christina A., Stanley, Sarah, McLaughlin, Stephen F., Lee, Clarence C., Sheth, Vrunda, Doan, Quynh, Hamill, Richard J., Steffen, David, Becnel, Lauren B., Sucgang, Richard, Zechiedrich, Lynn

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Novel Conserved Genotypes Correspond to Antibiotic Resistance Phenotypes of E. coli Clinical Isolates. e65961 von Swick, Michelle C, Evangelista, Michael A, Bodine, Truston J, Easton-Marks, Jeremy R, Barth, Patrick, Shah, Minita J, Chung, Christina ABormann, Stanley, Sarah, McLaughlin, Stephen F, Lee, Clarence C

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Correction: Novel Conserved Genotypes Correspond to Antibiotic Resistance Phenotypes of Clinical Isolates von Michelle C. Swick, Michael A. Evangelista, Truston J. Bodine, Jeremy R. Easton-Marks, Patrick Barth, Minita J. Shah, Christina A. Bormann Chung, Sarah Stanley, Stephen F. McLaughlin, Clarence C. Lee, Vrunda Sheth, Quynh Doan, Richard J. Hamill, David Steffen, Lauren B. Becnel, Richard Sucgang, Lynn Zechiedrich

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Data from: Novel conserved genotypes correspond to antibiotic resistance phenotypes of E. coli clinical isolates von Evangelista, Michael A., Swick, Michelle C., Bodine, Truston J., Easton-Marks, Jeremy R., Barth, Patrick, Shah, Minita J., Bormann Chung, Christina A., Stanley, Sarah, McLaughlin, Stephen F., Lee, Clarence C., Sheth, Vrunda, Doan, Quynh, Hamill, Richard J., Steffen, David, Becnel, Lauren B., Sucgang, Richard, Zechiedrich, Lynn

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Raw diBayes SNP calls for clinical isolate pools against three different reference E. coli genomes von Evangelista, Michael A., Swick, Michelle C., Bodine, Truston J., Easton-Marks, Jeremy R., Barth, Patrick, Shah, Minita J., Bormann Chung, Christina A., Stanley, Sarah, McLaughlin, Stephen F., Lee, Clarence C., Sheth, Vrunda, Doan, Quynh, Hamill, Richard J., Steffen, David, Becnel, Lauren B., Sucgang, Richard, Zechiedrich, Lynn

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Somatic whole genome dynamics of precancer in Barrett’s esophagus reveals features associated with disease progression von Paulson, Thomas G., Galipeau, Patricia C., Oman, Kenji M., Sanchez, Carissa A., Kuhner, Mary K., Smith, Lucian P., Hadi, Kevin, Shah, Minita, Arora, Kanika, Shelton, Jennifer, Johnson, Molly, Corvelo, Andre, Maley, Carlo C., Yao, Xiaotong, Sanghvi, Rashesh, Venturini, Elisa, Emde, Anne-Katrin, Hubert, Benjamin, Imielinski, Marcin, Robine, Nicolas, Reid, Brian J., Li, Xiaohong

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Genome-wide cell-free DNA mutational integration enables ultra-sensitive cancer monitoring von Zviran, Asaf, Schulman, Rafael C., Shah, Minita, Hill, Steven T. K., Deochand, Sunil, Khamnei, Cole C., Maloney, Dillon, Patel, Kristofer, Liao, Will, Widman, Adam J., Wong, Phillip, Callahan, Margaret K., Ha, Gavin, Reed, Sarah, Rotem, Denisse, Frederick, Dennie, Sharova, Tatyana, Miao, Benchun, Kim, Tommy, Gydush, Greg, Rhoades, Justin, Huang, Kevin Y., Omans, Nathaniel D., Bolan, Patrick O., Lipsky, Andrew H., Ang, Chelston, Malbari, Murtaza, Spinelli, Catherine F., Kazancioglu, Selena, Runnels, Alexi M., Fennessey, Samantha, Stolte, Christian, Gaiti, Federico, Inghirami, Giorgio G., Adalsteinsson, Viktor, Houck-Loomis, Brian, Ishii, Jennifer, Wolchok, Jedd D., Boland, Genevieve, Robine, Nicolas, Altorki, Nasser K., Landau, Dan A.

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Organoid Profiling Identifies Common Responders to Chemotherapy in Pancreatic Cancer von Tiriac, Hervé, Belleau, Pascal, Engle, Dannielle D, Plenker, Dennis, Deschênes, Astrid, Somerville, Tim D D, Froeling, Fieke E M, Burkhart, Richard A, Denroche, Robert E, Jang, Gun-Ho, Miyabayashi, Koji, Young, C Megan, Patel, Hardik, Ma, Michelle, LaComb, Joseph F, Palmaira, Randze Lerie D, Javed, Ammar A, Huynh, Jasmine C, Johnson, Molly, Arora, Kanika, Robine, Nicolas, Shah, Minita, Sanghvi, Rashesh, Goetz, Austin B, Lowder, Cinthya Y, Martello, Laura, Driehuis, Else, LeComte, Nicolas, Askan, Gokce, Iacobuzio-Donahue, Christine A, Clevers, Hans, Wood, Laura D, Hruban, Ralph H, Thompson, Elizabeth, Aguirre, Andrew J, Wolpin, Brian M, Sasson, Aaron, Kim, Joseph, Wu, Maoxin, Bucobo, Juan Carlos, Allen, Peter, Sejpal, Divyesh V, Nealon, William, Sullivan, James D, Winter, Jordan M, Gimotty, Phyllis A, Grem, Jean L, DiMaio, Dominick J, Buscaglia, Jonathan M, Grandgenett, Paul M, Brody, Jonathan R, Hollingsworth, Michael A, O'Kane, Grainne M, Notta, Faiyaz, Kim, Edward, Crawford, James M, Devoe, Craig, Ocean, Allyson, Wolfgang, Christopher L, Yu, Kenneth H, Li, Ellen, Vakoc, Christopher R, Hubert, Benjamin, Fischer, Sandra E, Wilson, Julie M, Moffitt, Richard, Knox, Jennifer, Krasnitz, Alexander, Gallinger, Steven, Tuveson, David A

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Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs von Hadi, Kevin, Yao, Xiaotong, Behr, Julie M, Deshpande, Aditya, Xanthopoulakis, Charalampos, Tian, Huasong, Kudman, Sarah, Rosiene, Joel, Darmofal, Madison, DeRose, Joseph, Mortensen, Rick, Adney, Emily M, Shaiber, Alon, Gajic, Zoran, Sigouros, Michael, Eng, Kenneth, Wala, Jeremiah A, Wrzeszczyński, Kazimierz O, Arora, Kanika, Shah, Minita, Emde, Anne-Katrin, Felice, Vanessa, Frank, Mayu O, Darnell, Robert B, Ghandi, Mahmoud, Huang, Franklin, Dewhurst, Sally, Maciejowski, John, de Lange, Titia, Setton, Jeremy, Riaz, Nadeem, Reis-Filho, Jorge S, Powell, Simon, Knowles, David A, Reznik, Ed, Mishra, Bud, Beroukhim, Rameen, Zody, Michael C, Robine, Nicolas, Oman, Kenji M, Sanchez, Carissa A, Kuhner, Mary K, Smith, Lucian P, Galipeau, Patricia C, Paulson, Thomas G, Reid, Brian J, Li, Xiaohong, Wilkes, David, Sboner, Andrea, Mosquera, Juan Miguel, Elemento, Olivier, Imielinski, Marcin

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New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing von Keller, Andreas, Graefen, Angela, Ball, Markus, Matzas, Mark, Boisguerin, Valesca, Maixner, Frank, Leidinger, Petra, Backes, Christina, Khairat, Rabab, Forster, Michael, Stade, Björn, Franke, Andre, Mayer, Jens, Spangler, Jessica, McLaughlin, Stephen, Shah, Minita, Lee, Clarence, Harkins, Timothy T., Sartori, Alexander, Moreno-Estrada, Andres, Henn, Brenna, Sikora, Martin, Semino, Ornella, Chiaroni, Jacques, Rootsi, Siiri, Myres, Natalie M., Cabrera, Vicente M., Underhill, Peter A., Bustamante, Carlos D., Vigl, Eduard Egarter, Samadelli, Marco, Cipollini, Giovanna, Haas, Jan, Katus, Hugo, O'Connor, Brian D., Carlson, Marc R.J., Meder, Benjamin, Blin, Nikolaus, Meese, Eckart, Pusch, Carsten M., Zink, Albert

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Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment von Widman, Adam J., Shah, Minita, Frydendahl, Amanda, Halmos, Daniel, Khamnei, Cole C., Øgaard, Nadia, Rajagopalan, Srinivas, Arora, Anushri, Deshpande, Aditya, Hooper, William F., Quentin, Jean, Bass, Jake, Zhang, Mingxuan, Langanay, Theophile, Andersen, Laura, Steinsnyder, Zoe, Liao, Will, Rasmussen, Mads Heilskov, Henriksen, Tenna Vesterman, Jensen, Sarah Østrup, Nors, Jesper, Therkildsen, Christina, Sotelo, Jesus, Brand, Ryan, Schiffman, Joshua S., Shah, Ronak H., Cheng, Alexandre Pellan, Maher, Colleen, Spain, Lavinia, Krause, Kate, Frederick, Dennie T., den Brok, Wendie, Lohrisch, Caroline, Shenkier, Tamara, Simmons, Christine, Villa, Diego, Mungall, Andrew J., Moore, Richard, Zaikova, Elena, Cerda, Viviana, Kong, Esther, Lai, Daniel, Malbari, Murtaza S., Marton, Melissa, Manaa, Dina, Winterkorn, Lara, Gelmon, Karen, Callahan, Margaret K., Boland, Genevieve, Potenski, Catherine, Wolchok, Jedd D., Saxena, Ashish, Turajlic, Samra, Imielinski, Marcin, Berger, Michael F., Aparicio, Sam, Altorki, Nasser K., Postow, Michael A., Robine, Nicolas, Andersen, Claus Lindbjerg, Landau, Dan A.

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A comprehensive assay for CFTR mutational analysis using next-generation sequencing von Abou Tayoun, Ahmad N, Tunkey, Christopher D, Pugh, Trevor J, Ross, Tristen, Shah, Minita, Lee, Clarence C, Harkins, Timothy T, Wells, Wendy A, Tafe, Laura J, Amos, Christopher I, Tsongalis, Gregory J

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Whole-genome characterization of lung adenocarcinomas lacking the RTK/RAS/RAF pathway von Carrot-Zhang, Jian, Yao, Xiaotong, Devarakonda, Siddhartha, Deshpande, Aditya, Damrauer, Jeffrey S, Silva, Tiago Chedraoui, Wong, Christopher K, Choi, Hyo Young, Felau, Ina, Robertson, A Gordon, Castro, Mauro A A, Bao, Lisui, Rheinbay, Esther, Liu, Eric Minwei, Trieu, Tuan, Haan, David, Yau, Christina, Hinoue, Toshinori, Liu, Yuexin, Shapira, Ofer, Kumar, Kiran, Mungall, Karen L, Zhang, Hailei, Lee, Jake June-Koo, Berger, Ashton, Gao, Galen F, Zhitomirsky, Binyamin, Liang, Wen-Wei, Zhou, Meng, Moorthi, Sitapriya, Berger, Alice H, Collisson, Eric A, Zody, Michael C, Ding, Li, Cherniack, Andrew D, Getz, Gad, Elemento, Olivier, Benz, Christopher C, Stuart, Josh, Zenklusen, J C, Beroukhim, Rameen, Chang, Jason C, Campbell, Joshua D, Hayes, D Neil, Yang, Lixing, Laird, Peter W, Weinstein, John N, Kwiatkowski, David J, Tsao, Ming S, Travis, William D, Khurana, Ekta, Berman, Benjamin P, Hoadley, Katherine A, Robine, Nicolas, Meyerson, Matthew, Govindan, Ramaswamy, Imielinski, Marcin

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A recurrent novel MGA-NUTM1 fusion identifies a new subtype of high-grade spindle cell sarcoma von Diolaiti, Daniel, Dela Cruz, Filemon S, Gundem, Gunes, Bouvier, Nancy, Boulad, Mathieu, Zhang, Yanming, Chou, Alexander J, Dunkel, Ira J, Sanghvi, Rashesh, Shah, Minita, Geiger, Heather, Rahman, Sadia, Felice, Vanessa, Wrzeszczynski, Kazimierz O, Darnell, Robert B, Antonescu, Cristina R, French, Christopher A, Papaemmanuil, Elli, Kung, Andrew L, Shukla, Neerav

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Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway von Carrot-Zhang, Jian, Yao, Xiaotong, Devarakonda, Siddhartha, Deshpande, Aditya, Damrauer, Jeffrey S., Silva, Tiago Chedraoui, Wong, Christopher K., Choi, Hyo Young, Felau, Ina, Robertson, A. Gordon, Castro, Mauro A.A., Bao, Lisui, Rheinbay, Esther, Liu, Eric Minwei, Trieu, Tuan, Haan, David, Yau, Christina, Hinoue, Toshinori, Liu, Yuexin, Shapira, Ofer, Kumar, Kiran, Mungall, Karen L., Zhang, Hailei, Lee, Jake June-Koo, Berger, Ashton, Gao, Galen F., Zhitomirsky, Binyamin, Liang, Wen-Wei, Zhou, Meng, Moorthi, Sitapriya, Berger, Alice H., Collisson, Eric A., Zody, Michael C., Ding, Li, Cherniack, Andrew D., Getz, Gad, Elemento, Olivier, Benz, Christopher C., Stuart, Josh, Zenklusen, J.C., Beroukhim, Rameen, Chang, Jason C., Campbell, Joshua D., Hayes, D. Neil, Yang, Lixing, Laird, Peter W., Weinstein, John N., Kwiatkowski, David J., Tsao, Ming S., Travis, William D., Khurana, Ekta, Berman, Benjamin P., Hoadley, Katherine A., Robine, Nicolas, Arora, Kanika, Shah, Minita, Shelton, Jennifer, Bowlby, Reanne, Friedl, Verena, Goldman, Mary, Craft, Brian, Heiman, David I., Hajirasouliha, Iman, Ricketts, Camir, Anur, Pavana, Chiotti, Kami E., Caesar-Johnson, Samantha J., Demchok, John A., Ferguson, Martin L., Kemal, Anab, Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Spellman, Paul T., Raphael, Benjamin, Akbani, Rehan, Zhu, Jingchun, Jones, Steven J.M., Shen, Hui, Meyerson, Matthew, Govindan, Ramaswamy, Imielinski, Marcin

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Sequencing and curation strategies for identifying candidate glioblastoma treatments von Frank, Mayu O, Koyama, Takahiko, Rhrissorrakrai, Kahn, Robine, Nicolas, Utro, Filippo, Emde, Anne-Katrin, Chen, Bo-Juen, Arora, Kanika, Shah, Minita, Geiger, Heather, Felice, Vanessa, Dikoglu, Esra, Rahman, Sadia, Fang, Alice, Vacic, Vladimir, Bergmann, Ewa A, Vogel, Julia L Moore, Reeves, Catherine, Khaira, Depinder, Calabro, Anthony, Kim, Duyang, Lamendola-Essel, Michelle F, Esteves, Cecilia, Agius, Phaedra, Stolte, Christian, Boockvar, John, Demopoulos, Alexis, Placantonakis, Dimitris G, Golfinos, John G, Brennan, Cameron, Bruce, Jeffrey, Lassman, Andrew B, Canoll, Peter, Grommes, Christian, Daras, Mariza, Diamond, Eli, Omuro, Antonio, Pentsova, Elena, Orange, Dana E, Harvey, Stephen J, Posner, Jerome B, Michelini, Vanessa V, Jobanputra, Vaidehi, Zody, Michael C, Kelly, John, Parida, Laxmi, Wrzeszczynski, Kazimierz O, Royyuru, Ajay K, Darnell, Robert B

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The Possibility of De Novo Assembly of the Genome and Population Genomics of the Mangrove Rivulus, Kryptolebias marmoratus von Kelley, Joanna L., Yee, Muh-Ching, Lee, Clarence, Levandowsky, Elizabeth, Shah, Minita, Harkins, Timothy, Earley, Ryan L., Bustamante, Carlos D.

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Correction to: Sequencing and curation strategies for identifying candidate glioblastoma treatments von Frank, Mayu O, Koyama, Takahiko, Rhrissorrakrai, Kahn, Robine, Nicolas, Utro, Filippo, Emde, Anne-Katrin, Chen, Bo-Juen, Arora, Kanika, Shah, Minita, Geiger, Heather, Felice, Vanessa, Dikoglu, Esra, Rahman, Sadia, Fang, Xiaolan, Vacic, Vladimir, Bergmann, Ewa A, Moore Vogel, Julia L, Reeves, Catherine, Khaira, Depinder, Calabro, Anthony, Kim, Duyang, Lamendola-Essel, Michelle F, Esteves, Cecilia, Agius, Phaedra, Stolte, Christian, Boockvar, John, Demopoulos, Alexis, Placantonakis, Dimitris G, Golfinos, John G, Brennan, Cameron, Bruce, Jeffrey, Lassman, Andrew B, Canoll, Peter, Grommes, Christian, Daras, Mariza, Diamond, Eli, Omuro, Antonio, Pentsova, Elena, Orange, Dana E, Harvey, Stephen J, Posner, Jerome B, Michelini, Vanessa V, Jobanputra, Vaidehi, Zody, Michael C, Kelly, John, Parida, Laxmi, Wrzeszczynski, Kazimierz O, Royyuru, Ajay K, Darnell, Robert B

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A Comprehensive Assay for CFTR Mutational Analysis Using Next‐Generation Sequencing von Abou Tayoun, Ahmad N., Tunkey, Christopher D., Tafe, Laura J., Levandowsky, Elizabeth, Spangler, Jessica, Dindinger, Matthew, Ross, Tristen, Shah, Minita, McLaughlin, Stephen, Lee, Clarence C., Harkins, Timothy T., Raia, Gabrielle, Amos, Christopher I., Wells, Wendy A., Tsongalis, Gregory J.

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