The Cooperative Binding Energetics of CytR and cAMP Receptor Protein Support a Quantitative Model of Differential Activation and Repression of CytR-Regulated Class III Escherichia... von Holt, Allison K, Senear, Donald F

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Multiple Conformations of the Cytidine Repressor DNA-Binding Domain Coalesce to One upon Recognition of a Specific DNA Surface von Moody, Colleen L, Tretyachenko-Ladokhina, Vira, Laue, Thomas M, Senear, Donald F, Cocco, Melanie J

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An Unusual Pattern of CytR and CRP Binding Energetics at Escherichia coli cddP Suggests a Unique Blend of Class I and Class II Mediated Activation von Holt, Allison K, Senear, Donald F

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Flexibility and Adaptability in Binding of E. coli Cytidine Repressor to Different Operators Suggests a Role in Differential Gene Regulation von Tretyachenko-Ladokhina, Vira, Cocco, Melanie J., Senear, Donald F.

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Structures of oncogenic, suppressor and rescued p53 core-domain variants: mechanisms of mutant p53 rescue von Wallentine, Brad D., Wang, Ying, Tretyachenko-Ladokhina, Vira, Tan, Martha, Senear, Donald F., Luecke, Hartmut

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Role of Protein−Protein Bridging Interactions on Cooperative Assembly of DNA-Bound CRP−CytR−CRP Complex and Regulation of the Escherichia Coli CytR Regulon von Chahla, Mayy, Wooll, John, Laue, Thomas M, Nguyen, Nghia, Senear, Donald F

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Indirect Recognition in Sequence-specific DNA Binding by Escherichia coli Integration Host Factor: THE ROLE OF DNA DEFORMATION ENERGY von Aeling, Kimberly A, Opel, Michael L, Steffen, Nicholas R, Tretyachenko-Ladokhina, Vira, Hatfield, G. Wesley, Lathrop, Richard H, Senear, Donald F

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Dynamic Consequences of Specificity within the Cytidine Repressor DNA-Binding Domain von Soto, Jenaro, Moody, Colleen, Senear, Donald F., Cocco, Melanie J.

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Alexa and Oregon Green dyes as fluorescence anisotropy probes for measuring protein–protein and protein–nucleic acid interactions von Rusinova, Elena, Tretyachenko-Ladokhina, Vira, Vele, Oana E., Senear, Donald F., Alexander Ross, J.B.

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Molecular mechanisms of functional rescue mediated by P53 tumor suppressor mutations von Tan, Yu-Hong, Chen, Y. Morris, Ye, Xiang, Lu, Qiang, Tretyachenko-Ladokhina, Vira, Yang, Wei, Senear, Donald F., Luo, Ray

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5-Hydroxytryptophan as a new intrinsic probe for investigating protein-DNA interactions by analytical ultracentrifugation. Study of the effect of DNA on self-assembly of the bacter... von Laue, Thomas M, Senear, Donald F, Eaton, Steven, Ross, J. B. Alexander

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DNA Deformation Energy as an Indirect Recognition Mechanism in Protein-DNA Interactions von Aeling, K.A., Steffen, N.R., Johnson, M., Hatfield, G.W., Lathrop, R.H., Senear, D.F.

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Energetics of cooperative protein-DNA interactions: comparison between quantitative deoxyribonuclease footprint titration and filter binding von Senear, Donald F, Brenowitz, Michael, Shea, Madeline A, Ackers, Gary K

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Pressure dissociation of integration host factor-DNA complexes reveals flexibility-dependent structural variation at the protein-DNA interface von Senear, Donald F, Tretyachenko-Ladokhina, Vira, Opel, Michael L, Aeling, Kimberly A, Wesley Hatfield, G, Franklin, Laurie M, Darlington, Reuben C, Alexander Ross, J.B

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Indirect Recognition in Sequence-specific DNA Binding by Escherichia coli Integration Host Factor von Aeling, Kimberly A., Opel, Michael L., Steffen, Nicholas R., Tretyachenko-Ladokhina, Vira, Hatfield, G. Wesley, Lathrop, Richard H., Senear, Donald F.

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Thermodynamics of E. coli cytidine repressor interactions with DNA: distinct modes of binding to different operators suggests a role in differential gene regulation von Tretyachenko-Ladokhina, Vira, Ross, J.B.Alexander, Senear, Donald F

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Activation of Gene Expression by a Ligand-induced Conformational Change of a Protein-DNA Complex von Rhee, Kyu Y., Senear, Donald F., Hatfield, G. Wesley

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Quantitative Analysis of Tryptophan Analogue Incorporation in Recombinant Proteins von Senear, Donald F., Mendelson, Robert A., Stone, Deborah B., Luck, Linda A., Rusinova, Elena, Ross, J.B.Alexander

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Comparison of operator-specific and nonspecific DNA binding of the .lambda. cI repressor: [KCl] and pH effects von Senear, Donald F, Batey, Robert

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[9] Quantitative DNase footprint titration: A method for studying protein-DNA interactions von Brenowitz, Michael, Senear, Donald F., Shea, Madeline A., Ackers, Gary K.

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