A key role for mitochondrial gatekeeper pyruvate dehydrogenase in oncogene-induced senescence von Kaplon, Joanna, Zheng, Liang, Meissl, Katrin, Chaneton, Barbara, Selivanov, Vitaly A., Mackay, Gillian, van der Burg, Sjoerd H., Verdegaal, Elizabeth M. E., Cascante, Marta, Shlomi, Tomer, Gottlieb, Eyal, Peeper, Daniel S.

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Unveiling a key role of oxaloacetate-glutamate interaction in regulation of respiration and ROS generation in nonsynaptic brain mitochondria using a kinetic model von Selivanov, Vitaly A., Zagubnaya, Olga A., Nartsissov, Yaroslav R., Cascante, Marta

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Reactive oxygen species production by forward and reverse electron fluxes in the mitochondrial respiratory chain von Selivanov, Vitaly A, Votyakova, Tatyana V, Pivtoraiko, Violetta N, Zeak, Jennifer, Sukhomlin, Tatiana, Trucco, Massimo, Roca, Josep, Cascante, Marta

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The Role of External and Matrix pH in Mitochondrial Reactive Oxygen Species Generation von Selivanov, Vitaly A., Zeak, Jennifer A., Roca, Josep, Cascante, Marta, Trucco, Massimo, Votyakova, Tatyana V.

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p13CMFA: Parsimonious 13C metabolic flux analysis von Foguet, Carles, Jayaraman, Anusha, Marin, Silvia, Selivanov, Vitaly A, Moreno, Pablo, Messeguer, Ramon, de Atauri, Pedro, Cascante, Marta

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Relevance of the MEK/ERK signaling pathway in the metabolism of activated macrophages: a metabolomic approach von Través, Paqui G, de Atauri, Pedro, Marín, Silvia, Pimentel-Santillana, María, Rodríguez-Prados, Juan-Carlos, Marín de Mas, Igor, Selivanov, Vitaly A, Martín-Sanz, Paloma, Boscá, Lisardo, Cascante, Marta

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MIDcor, an R-program for deciphering mass interferences in mass spectra of metabolites enriched in stable isotopes von Selivanov, Vitaly A, Benito, Adrián, Miranda, Anibal, Aguilar, Esther, Polat, Ibrahim Halil, Centelles, Josep J, Jayaraman, Anusha, Lee, Paul W N, Marin, Silvia, Cascante, Marta

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HepatoDyn: A Dynamic Model of Hepatocyte Metabolism That Integrates 13C Isotopomer Data von Foguet, Carles, Marin, Silvia, Selivanov, Vitaly A, Fanchon, Eric, Lee, Wai-Nang Paul, Guinovart, Joan J, de Atauri, Pedro, Cascante, Marta

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Bistability of mitochondrial respiration underlies paradoxical reactive oxygen species generation induced by anoxia von Selivanov, Vitaly A, Votyakova, Tatyana V, Zeak, Jennifer A, Trucco, Massimo, Roca, Josep, Cascante, Marta

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Multistationary and oscillatory modes of free radicals generation by the mitochondrial respiratory chain revealed by a bifurcation analysis von Selivanov, Vitaly A, Cascante, Marta, Friedman, Mark, Schumaker, Mark F, Trucco, Massimo, Votyakova, Tatyana V

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The landscape of tiered regulation of breast cancer cell metabolism von Katzir, Rotem, Polat, Ibrahim H., Harel, Michal, Katz, Shir, Foguet, Carles, Selivanov, Vitaly A., Sabatier, Philippe, Cascante, Marta, Geiger, Tamar, Ruppin, Eytan

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Modeling of Spatial Metabolite Distributions in the Cardiac Sarcomere von Selivanov, Vitaly A., Krause, Stephen, Roca, Josep, Cascante, Marta

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MITODYN: An Open Source Software for Quantitative Modeling of Mitochondrial and Cellular Energy Metabolic Flux Dynamics in Health and Disease von Selivanov, Vitaly A., Zagubnaya, Olga A., Foguet, Carles, Nartsissov, Yaroslav R., Cascante, Marta

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Software Supporting a Workflow of Quantitative Dynamic Flux Maps Estimation in Central Metabolism from SIRM Experimental Data von Selivanov, Vitaly A., Marin, Silvia, Tarragó-Celada, Josep, Lane, Andrew N., Higashi, Richard M., Fan, Teresa W.-M., de Atauri, Pedro, Cascante, Marta

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Restrictions in ATP diffusion within sarcomeres can provoke ATP-depleted zones impairing exercise capacity in chronic obstructive pulmonary disease von Alekseev, Alexey E., Guzun, Rita, Reyes, Santiago, Pison, Christophe, Schlattner, Uwe, Selivanov, Vitaly A., Cascante, Marta

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Compartmentation of membrane processes and nucleotide dynamics in diffusion-restricted cardiac cell microenvironment von Alekseev, Alexey E, Reyes, Santiago, Selivanov, Vitaly A, Dzeja, Petras P, Terzic, Andre

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Integration of enzyme kinetic models and isotopomer distribution analysis for studies of in situ cell operation von Selivanov, Vitaly A, Sukhomlin, Tatiana, Centelles, Josep J, Lee, Paul W N, Cascante, Marta

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(13)C metabolic flux analysis shows that resistin impairs the metabolic response to insulin in L6E9 myotubes von Guzmán, Shirley, Marin, Silvia, Miranda, Anibal, Selivanov, Vitaly A, Centelles, Josep J, Harmancey, Romain, Smih, Fatima, Turkieh, Annie, Durocher, Yves, Zorzano, Antonio, Rouet, Philippe, Cascante, Marta

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Compartmentation of glycogen metabolism revealed from 13C isotopologue distributions von de Mas, Igor Marin, Selivanov, Vitaly A, Marin, Silvia, Roca, Josep, Orešič, Matej, Agius, Loranne, Cascante, Marta

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Software for dynamic analysis of tracer-based metabolomic data: estimation of metabolic fluxes and their statistical analysis von Selivanov, Vitaly A., Marin, Silvia, Lee, Paul W. N., Cascante, Marta

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