TT-seq maps the human transient transcriptome von Schwalb, Björn, Michel, Margaux, Zacher, Benedikt, Frühauf, Katja, Demel, Carina, Tresch, Achim, Gagneur, Julien, Cramer, Patrick

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The pause-initiation limit restricts transcription activation in human cells von Gressel, Saskia, Schwalb, Björn, Cramer, Patrick

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Promoter Distortion and Opening in the RNA Polymerase II Cleft von Dienemann, Christian, Schwalb, Björn, Schilbach, Sandra, Cramer, Patrick

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Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation von Sun, Mai, Schwalb, Björn, Schulz, Daniel, Pirkl, Nicole, Etzold, Stefanie, Larivière, Laurent, Maier, Kerstin C, Seizl, Martin, Tresch, Achim, Cramer, Patrick

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The Implication of Early Chromatin Changes in X Chromosome Inactivation von Żylicz, Jan Jakub, Bousard, Aurélie, Žumer, Kristina, Dossin, Francois, Mohammad, Eusra, da Rocha, Simão Teixeira, Schwalb, Björn, Syx, Laurène, Dingli, Florent, Loew, Damarys, Cramer, Patrick, Heard, Edith

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Efficient RNA polymerase II pause release requires U2 snRNP function von Caizzi, Livia, Monteiro-Martins, Sara, Schwalb, Björn, Lysakovskaia, Kseniia, Schmitzova, Jana, Sawicka, Anna, Chen, Ying, Lidschreiber, Michael, Cramer, Patrick

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Native molecule sequencing by nano-ID reveals synthesis and stability of RNA isoforms von Maier, Kerstin C, Gressel, Saskia, Cramer, Patrick, Schwalb, Björn

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CDK12 globally stimulates RNA polymerase II transcription elongation and carboxyl-terminal domain phosphorylation von Tellier, Michael, Zaborowska, Justyna, Caizzi, Livia, Mohammad, Eusra, Velychko, Taras, Schwalb, Björn, Ferrer-Vicens, Ivan, Blears, Daniel, Nojima, Takayuki, Cramer, Patrick, Murphy, Shona

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Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast von Miller, Christian, Schwalb, Björn, Maier, Kerstin, Schulz, Daniel, Dümcke, Sebastian, Zacher, Benedikt, Mayer, Andreas, Sydow, Jasmin, Marcinowski, Lisa, Dölken, Lars, Martin, Dietmar E, Tresch, Achim, Cramer, Patrick

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Evaluation of Cereblon-Directing Warheads for the Development of Orally Bioavailable PROTACs von Actis, Marisa, Cresser-Brown, Joel, Caine, Elizabeth A., Steger, Martin, Aggarwal, Anup, Mayasundari, Anand, Murphy, Nancy, Valinciute, Gintvile, Li, Yong, Fu, Xiang, Yang, Lei, Marsh, Graham, Hughes, Gareth, Karadogan, Burhan, Wheeler, Dean, Norley, Mark, Spain, Freya, Urh, Marjeta, Roussel, Martine F., Schwalb, Björn, Daub, Henrik, Riching, Kristin M., Maple, Hannah, Nishiguchi, Gisele, Rankovic, Zoran

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TT‐seq captures enhancer landscapes immediately after T‐cell stimulation von Michel, Margaux, Demel, Carina, Zacher, Benedikt, Schwalb, Björn, Krebs, Stefan, Blum, Helmut, Gagneur, Julien, Cramer, Patrick

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CDK9-dependent RNA polymerase II pausing controls transcription initiation von Gressel, Saskia, Schwalb, Björn, Decker, Tim Michael, Qin, Weihua, Leonhardt, Heinrich, Eick, Dirk, Cramer, Patrick

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Fine mapping of genome activation in bovine embryos by RNA sequencing von Graf, Alexander, Krebs, Stefan, Zakhartchenko, Valeri, Schwalb, Björn, Blum, Helmut, Wolf, Eckhard

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Periodic mRNA synthesis and degradation co‐operate during cell cycle gene expression von Eser, Philipp, Demel, Carina, Maier, Kerstin C, Schwalb, Björn, Pirkl, Nicole, Martin, Dietmar E, Cramer, Patrick, Tresch, Achim

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Accurate Promoter and Enhancer Identification in 127 ENCODE and Roadmap Epigenomics Cell Types and Tissues by GenoSTAN von Zacher, Benedikt, Michel, Margaux, Schwalb, Björn, Cramer, Patrick, Tresch, Achim, Gagneur, Julien

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Global Analysis of Eukaryotic mRNA Degradation Reveals Xrn1-Dependent Buffering of Transcript Levels von Sun, Mai, Schwalb, Björn, Pirkl, Nicole, Maier, Kerstin C., Schenk, Arne, Failmezger, Henrik, Tresch, Achim, Cramer, Patrick

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Architecture of the RNA polymerase II-Paf1C-TFIIS transcription elongation complex von Xu, Youwei, Bernecky, Carrie, Lee, Chung-Tien, Maier, Kerstin C., Schwalb, Björn, Tegunov, Dimitry, Plitzko, Jürgen M., Urlaub, Henning, Cramer, Patrick

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Promoter-proximal RNA polymerase II termination regulates transcription during human cell type transition von Lysakovskaia, Kseniia, Devadas, Arjun, Schwalb, Björn, Lidschreiber, Michael, Cramer, Patrick

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RNA transcription and degradation of Alu retrotransposons depends on sequence features and evolutionary history von Baar, Till, Dümcke, Sebastian, Gressel, Saskia, Schwalb, Björn, Dilthey, Alexander, Cramer, Patrick, Tresch, Achim

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Integrator is a genome-wide attenuator of non-productive transcription von Lykke-Andersen, Søren, Žumer, Kristina, Molska, Ewa Šmidová, Rouvière, Jérôme O., Wu, Guifen, Demel, Carina, Schwalb, Björn, Schmid, Manfred, Cramer, Patrick, Jensen, Torben Heick

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