Different gut microbial communities correlate with efficacy of albendazole-ivermectin against soil-transmitted helminthiases von Schneeberger, Pierre H. H., Gueuning, Morgan, Welsche, Sophie, Hürlimann, Eveline, Dommann, Julian, Häberli, Cécile, Frey, Jürg E., Sayasone, Somphou, Keiser, Jennifer

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Egg excretion patterns of soil-transmitted helminth infections in humans following albendazole-ivermectin and albendazole treatment von Welsche, Sophie, Schneeberger, Pierre H H, Hattendorf, Jan, Sayasone, Somphou, Hürlimann, Eveline, Keiser, Jennifer

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Aryl hydrocarbon receptor agonist indigo protects against obesity-related insulin resistance through modulation of intestinal and metabolic tissue immunity von Lin, Yi-Hsuan, Luck, Helen, Khan, Saad, Schneeberger, Pierre H. H., Tsai, Sue, Clemente-Casares, Xavier, Lei, Helena, Leu, Yann-Lii, Chan, Yi Tao, Chen, Hsing-Yu, Yang, Sien-Hung, Coburn, Bryan, Winer, Shawn, Winer, Daniel A.

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Validation of a human-serum-based in vitro growth method for drug screening on juvenile development stages of Schistosoma mansoni von Buchter, Valentin, Schneeberger, Pierre H H, Keiser, Jennifer

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Gut microbiomes of agropastoral children from the Adadle region of Ethiopia reflect their unique dietary habits von Yersin, Simon, Garneau, Julian R., Schneeberger, Pierre H. H., Osman, Kadra Ali, Cercamondi, Colin Ivano, Muhummed, Abdifatah Muktar, Tschopp, Rea, Zinsstag, Jakob, Vonaesch, Pascale

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Investigations on the interplays between Schistosoma mansoni, praziquantel and the gut microbiome von Schneeberger, Pierre H H, Coulibaly, Jean T, Panic, Gordana, Daubenberger, Claudia, Gueuning, Morgan, Frey, Jürg E, Keiser, Jennifer

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Microbiota analysis optimization for human bronchoalveolar lavage fluid von Schneeberger, Pierre H H, Prescod, Janice, Levy, Liran, Hwang, David, Martinu, Tereza, Coburn, Bryan

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Additional blood meals increase sporozoite infection in Anopheles mosquitoes but not Plasmodium falciparum genetic diversity von Hofer, Lorenz M., Kweyamba, Prisca A., Sayi, Rajabu M., Chabo, Mohamed S., Mwanga, Rehema, Maitra, Sonali L., Somboka, Mariam M., Schnoz, Annina, Golumbeanu, Monica, Schneeberger, Pierre H. H., Ross, Amanda, Habtewold, Tibebu, Nsanzabana, Christian, Moore, Sarah J., Tambwe, Mgeni M.

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Microbial and chemical contamination of water, sediment and soil in the Nakivubo wetland area in Kampala, Uganda von Fuhrimann, Samuel, Stalder, Michelle, Winkler, Mirko S., Niwagaba, Charles B., Babu, Mohammed, Masaba, Godfrey, Kabatereine, Narcis B., Halage, Abdullah A., Schneeberger, Pierre H. H., Utzinger, Jürg, Cissé, Guéladio

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Lung Allograft Microbiome Association with Gastroesophageal Reflux, Inflammation, and Allograft Dysfunction von Schneeberger, Pierre H H, Zhang, Chen Yang Kevin, Santilli, Jessica, Chen, Bo, Xu, Wei, Lee, Youngho, Wijesinha, Zonelle, Reguera-Nuñez, Elaine, Yee, Noelle, Ahmed, Musawir, Boonstra, Kristen, Ramendra, Rayoun, Frankel, Courtney W, Palmer, Scott M, Todd, Jamie L, Martinu, Tereza, Coburn, Bryan

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Transitions in oral and gut microbiome of HPV+ oropharyngeal squamous cell carcinoma following definitive chemoradiotherapy (ROMA LA-OPSCC study) von Oliva, Marc, Schneeberger, Pierre H. H., Rey, Victor, Cho, Matthew, Taylor, Rachel, Hansen, Aaron R., Taylor, Kirsty, Hosni, Ali, Bayley, Andrew, Hope, Andrew J., Bratman, Scott V., Ringash, Jolie, Singh, Simron, Weinreb, Ilan, Perez-Ordoñez, Bayardo, Chepeha, Douglas, Waldron, John, Xu, Wei, Guttman, David, Siu, Lillian L., Coburn, Bryan, Spreafico, Anna

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Development and evaluation of a bioinformatics approach for designing molecular assays for viral detection von Schneeberger, Pierre H H, Pothier, Joël F, Bühlmann, Andreas, Duffy, Brion, Beuret, Christian, Utzinger, Jürg, Frey, Jürg E

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Exposure of gut bacterial isolates to the anthelminthic drugs, ivermectin and moxidectin, leads to antibiotic-like phenotypes of growth inhibition and adaptation von Dommann, Julian, Keiser, Jennifer, Garneau, Julian, Gandelin, Alison, Casanova, Carlo, Keller, Peter M., Sayasone, Somphou, Vonaesch, Pascale, Schneeberger, Pierre H. H.

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A novel barcoded nanopore sequencing workflow of high-quality, full-length bacterial 16S amplicons for taxonomic annotation of bacterial isolates and complex microbial communities von Dommann, Julian, Kerbl-Knapp, Jakob, Albertos Torres, Diana, Egli, Adrian, Keiser, Jennifer, Schneeberger, Pierre H H

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Two-Target Quantitative PCR To Predict Library Composition for Shallow Shotgun Sequencing von Cho, Matthew Y, Oliva, Marc, Spreafico, Anna, Chen, Bo, Wei, Xu, Choi, Yoojin, Kaul, Rupert, Siu, Lillian L, Coburn, Bryan, Schneeberger, Pierre H H

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Performance Characteristics of Next-Generation Sequencing for the Detection of Antimicrobial Resistance Determinants in Escherichia coli Genomes and Metagenomes von Rooney, Ashley M, Raphenya, Amogelang R, Melano, Roberto G, Seah, Christine, Yee, Noelle R, MacFadden, Derek R, McArthur, Andrew G, Schneeberger, Pierre H H, Coburn, Bryan

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Habitat use by Neotropical mosquitoes (Diptera: Culicidae): vegetation structure and edge effects von Orlandin, Elton, Santos, Emili B, Schneeberger, André H, Souza, Vilmar O, Favretto, Mario A

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First-in-class Microbial Ecosystem Therapeutic 4 (MET4) in combination with immune checkpoint inhibitors in patients with advanced solid tumors (MET4-IO trial) von Spreafico, A., Heirali, A.A., Araujo, D.V., Tan, T.J., Oliva, M., Schneeberger, P.H.H., Chen, B., Wong, M.K., Stayner, L.-A., Hansen, A.R., Saibil, S.D., Wang, B.X., Cochrane, K., Sherriff, K., Allen-Vercoe, E., Xu, W., Siu, L.L., Coburn, B.

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Virus Detection by High-Throughput Sequencing of Small RNAs: Large-Scale Performance Testing of Sequence Analysis Strategies von Massart, Sebastien, Chiumenti, Michela, De Jonghe, Kris, Glover, Rachel, Haegeman, Annelies, Koloniuk, Igor, Komínek, Petr, Kreuze, Jan, Kutnjak, Denis, Lotos, Leonidas, Maclot, François, Maliogka, Varvara, Maree, Hans J, Olivier, Thibaut, Olmos, Antonio, Pooggin, Mikhail M, Reynard, Jean-Sébastien, Ruiz-García, Ana B, Safarova, Dana, Schneeberger, Pierre H H, Sela, Noa, Turco, Silvia, Vainio, Eeva J, Varallyay, Eva, Verdin, Eric, Westenberg, Marcel, Brostaux, Yves, Candresse, Thierry

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Mosquitoes (Diptera: Culicidae) from crepuscular period in an Atlantic Forest area in Southern Brazil von Orlandin, E, Santos, E B, Piovesan, M, Favretto, M A, Schneeberger, A H, Souza, V O, Muller, G A, Wagner, G

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