B-NER: A Novel Bangla Named Entity Recognition Dataset with Largest Entities and Its Baseline Evaluation von Haque, Md Zahidul, Zaman, Sakib, Saurav, Jillur Rahman, Haque, Summit, Islam, Md Saiful, Amin, Mohammad Ruhul

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The state of applying artificial intelligence to tissue imaging for cancer research and early detection [version 1; peer review: awaiting peer review] von Robben, Michael, Hajighasemi, Amir, Nasr, Mohammad Sadegh, Veerla, Jai Prakesh, Alsup, Anne Marie, Rout, Biraaj, Shang, Helen H., Fowlds, Kelli, Malidarreh, Parisa Boodaghi, Koomey, Paul, Saurav, Jillur Rahman, Luber, Jacob M.

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Analyzing Lack of Concordance Between the Proteome and Transcriptome in Paired scRNA-Seq and Multiplexed Spatial Proteomics von Veerla, Jai Prakash, Saurav, Jillur Rahman, Robben, Michael, Luber, Jacob M

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SpatialVisVR: An Immersive, Multiplexed Medical Image Viewer With Contextual Similar-Patient Search von Veerla, Jai Prakash, Guttikonda, Partha Sai, Hajighasemi, Amir, Saurav, Jillur Rahman, Darji, Aarti, Reynolds, Cody T, Mohamed, Mohamed, Nasr, Mohammad S, Shang, Helen H, Luber, Jacob M

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Predicting Future States with Spatial Point Processes in Single Molecule Resolution Spatial Transcriptomics von Malidarreh, Parisa Boodaghi, Rout, Biraaj, Nasr, Mohammad Sadegh, Borad, Priyanshi, Saurav, Jillur Rahman, Veerla, Jai Prakash, Fenelon, Kelli, Koromila, Theodora, Luber, Jacob M

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Peptide Sequencing Via Protein Language Models von Pham, Thuong Le Hoai, Saurav, Jillur Rahman, Omere, Aisosa A, Heyl, Calvin J, Nasr, Mohammad Sadegh, Reynolds, Cody Tyler, Veerla, Jai Prakash Yadav, Shang, Helen H, Jaworski, Justyn, Ravenscraft, Alison, Buonomo, Joseph Anthony, Luber, Jacob M

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Clinically Relevant Latent Space Embedding of Cancer Histopathology Slides through Variational Autoencoder Based Image Compression von Nasr, Mohammad Sadegh, Hajighasemi, Amir, Koomey, Paul, Malidarreh, Parisa Boodaghi, Robben, Michael, Saurav, Jillur Rahman, Shang, Helen H, Huber, Manfred, Luber, Jacob M

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A SSIM Guided cGAN Architecture For Clinically Driven Generative Image Synthesis of Multiplexed Spatial Proteomics Channels von Saurav, Jillur Rahman, Nasr, Mohammad Sadegh, Koomey, Paul, Robben, Michael, Huber, Manfred, Weidanz, Jon, Ryan, Bríd, Ruppin, Eytan, Jiang, Peng, Luber, Jacob M

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Real-Time Diagnostic Integrity Meets Efficiency: A Novel Platform-Agnostic Architecture for Physiological Signal Compression von Vora, Neel R, Hajighasemi, Amir, Reynolds, Cody T, Radmehr, Amirmohammad, Mohamed, Mohamed, Saurav, Jillur Rahman, Aziz, Abdul, Veerla, Jai Prakash, Nasr, Mohammad S, Lotspeich, Hayden, Guttikonda, Partha Sai, Pham, Thuong, Darji, Aarti, Malidarreh, Parisa Boodaghi, Shang, Helen H, Harvey, Jay, Ding, Kan, Nguyen, Phuc, Luber, Jacob M

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Analyzing Lack of Concordance Between the Proteome and Transcriptome in Paired scRNA-Seq and Multiplexed Spatial Proteomics von Veerla, Jai Prakash, Jillur Rahman Saurav, Robben, Michael, Luber, Jacob M

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SpatialVisVR: An Immersive, Multiplexed Medical Image Viewer With Contextual Similar-Patient Search von Veerla, Jai Prakash, Partha Sai Guttikonda, Hajighasemi, Amir, Jillur Rahman Saurav, Darji, Aarti, Reynolds, Cody T, Mohamed, Mohamed, Nasr, Mohammad S, Shang, Helen H, Luber, Jacob M

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Peptide Sequencing Via Protein Language Models von Thuong Le Hoai Pham, Jillur Rahman Saurav, Omere, Aisosa A, Heyl, Calvin J, Mohammad Sadegh Nasr, Cody Tyler Reynolds, Jai Prakash Yadav Veerla, Shang, Helen H, Jaworski, Justyn, Ravenscraft, Alison, Buonomo, Joseph Anthony, Luber, Jacob M

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Multimodal Pathology Image Search Between H&E Slides and Multiplexed Immunofluorescent Images von Hajighasemi, Amir, MD Jillur Rahman Saurav, Nasr, Mohammad S, Veerla, Jai Prakash, Darji, Aarti, Malidarreh, Parisa Boodaghi, Robben, Michael, Shang, Helen H, Luber, Jacob M

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A SSIM Guided cGAN Architecture For Clinically Driven Generative Image Synthesis of Multiplexed Spatial Proteomics Channels von Jillur Rahman Saurav, Mohammad Sadegh Nasr, Koomey, Paul, Robben, Michael, Huber, Manfred, Weidanz, Jon, Ryan, Bríd, Ruppin, Eytan, Jiang, Peng, Luber, Jacob M

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Clinically Relevant Latent Space Embedding of Cancer Histopathology Slides through Variational Autoencoder Based Image Compression von Mohammad Sadegh Nasr, Hajighasemi, Amir, Koomey, Paul, Malidarreh, Parisa Boodaghi, Robben, Michael, Jillur Rahman Saurav, Shang, Helen H, Huber, Manfred, Luber, Jacob M

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Histopathology Slide Indexing and Search: Are We There Yet? von Shang, Helen H, Mohammad Sadegh Nasr, Veerla, Jai Prakash, Malidarreh, Parisa Boodaghi, MD Jillur Rahman Saurav, Hajighasemi, Amir, Huber, Manfred, Chace Moleta, Makker, Jitin, Luber, Jacob M

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The State of Applying Artificial Intelligence to Tissue Imaging for Cancer Research and Early Detection von Robben, Michael, Hajighasemi, Amir, Mohammad Sadegh Nasr, Veerla, Jai Prakesh, Alsup, Anne M, Rout, Biraaj, Shang, Helen H, Fowlds, Kelli, Malidarreh, Parisa Boodaghi, Koomey, Paul, MD Jillur Rahman Saurav, Luber, Jacob M

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Real-Time Diagnostic Integrity Meets Efficiency: A Novel Platform-Agnostic Architecture for Physiological Signal Compression von Vora, Neel R, Hajighasemi, Amir, Reynolds, Cody T, Radmehr, Amirmohammad, Mohamed, Mohamed, Jillur Rahman Saurav, Aziz, Abdul, Veerla, Jai Prakash, Nasr, Mohammad S, Lotspeich, Hayden, Partha Sai Guttikonda, Pham, Thuong, Darji, Aarti, Malidarreh, Parisa Boodaghi, Shang, Helen H, Harvey, Jay, Ding, Kan, Nguyen, Phuc, Luber, Jacob M

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Multimodal Pathology Image Search Between H&E Slides and Multiplexed Immunofluorescent Images von Hajighasemi, Amir, Saurav, MD Jillur Rahman, Nasr, Mohammad S, Veerla, Jai Prakash, Darji, Aarti, Malidarreh, Parisa Boodaghi, Robben, Michael, Shang, Helen H, Luber, Jacob M

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The State of Applying Artificial Intelligence to Tissue Imaging for Cancer Research and Early Detection von Robben, Michael, Hajighasemi, Amir, Nasr, Mohammad Sadegh, Veerla, Jai Prakesh, Alsup, Anne M, Rout, Biraaj, Shang, Helen H, Fowlds, Kelli, Malidarreh, Parisa Boodaghi, Koomey, Paul, Saurav, MD Jillur Rahman, Luber, Jacob M

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