Dynamic reorganization of open chromatin underlies diverse transcriptomes during spermatogenesis von Maezawa, So, Yukawa, Masashi, Alavattam, Kris G, Barski, Artem, Namekawa, Satoshi H

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Histone H3K36me2 and H3K36me3 form a chromatin platform essential for DNMT3A-dependent DNA methylation in mouse oocytes von Yano, Seiichi, Ishiuchi, Takashi, Abe, Shusaku, Namekawa, Satoshi H., Huang, Gang, Ogawa, Yoshihiro, Sasaki, Hiroyuki

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PRC1 directs PRC2-H3K27me3 deposition to shield adult spermatogonial stem cells from differentiation von Hu, Mengwen, Yeh, Yu-Han, Maezawa, So, Nakagawa, Toshinori, Yoshida, Shosei, Namekawa, Satoshi H

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Attenuated chromatin compartmentalization in meiosis and its maturation in sperm development von Alavattam, Kris G., Maezawa, So, Sakashita, Akihiko, Khoury, Haia, Barski, Artem, Kaplan, Noam, Namekawa, Satoshi H.

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MEK/ERK signaling directly and indirectly contributes to the cyclical self‐renewal of spermatogonial stem cells von Hasegawa, Kazuteru, Namekawa, Satoshi H., Saga, Yumiko

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Polycomb protein SCML2 mediates paternal epigenetic inheritance through sperm chromatin von Sakashita, Akihiko, Ooga, Masatoshi, Otsuka, Kai, Maezawa, So, Takeuchi, Chikara, Wakayama, Sayaka, Wakayama, Teruhiko, Namekawa, Satoshi H

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Meiotic sex chromosome inactivation and the XY body: a phase separation hypothesis von Alavattam, Kris G., Maezawa, So, Andreassen, Paul R., Namekawa, Satoshi H.

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UHRF1 suppresses retrotransposons and cooperates with PRMT5 and PIWI proteins in male germ cells von Dong, Juan, Wang, Xiaoli, Cao, Congcong, Wen, Yujiao, Sakashita, Akihiko, Chen, Si, Zhang, Jin, Zhang, Yue, Zhou, Liquan, Luo, Mengcheng, Liu, Mingxi, Liao, Aihua, Namekawa, Satoshi H., Yuan, Shuiqiao

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SCML2 Establishes the Male Germline Epigenome through Regulation of Histone H2A Ubiquitination von Hasegawa, Kazuteru, Sin, Ho-Su, Maezawa, So, Broering, Tyler J., Kartashov, Andrey V., Alavattam, Kris G., Ichijima, Yosuke, Zhang, Fan, Bacon, W. Clark, Greis, Kenneth D., Andreassen, Paul R., Barski, Artem, Namekawa, Satoshi H.

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Super-enhancer switching drives a burst in gene expression at the mitosis-to-meiosis transition von Maezawa, So, Sakashita, Akihiko, Yukawa, Masashi, Chen, Xiaoting, Takahashi, Kazuki, Alavattam, Kris G., Nakata, Ippo, Weirauch, Matthew T., Barski, Artem, Namekawa, Satoshi H.

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The Initiation of Meiotic Sex Chromosome Inactivation Sequesters DNA Damage Signaling from Autosomes in Mouse Spermatogenesis von Abe, Hironori, Alavattam, Kris G., Hu, Yueh-Chiang, Pang, Qishen, Andreassen, Paul R., Hegde, Rashmi S., Namekawa, Satoshi H.

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ATAC-Seq Analysis of Accessible Chromatin: From Experimental Steps to Data Analysis von Tatara, Mayu, Ikeda, Taiyo, Namekawa, Satoshi H., Maezawa, So

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Paternally inherited H3K27me3 affects chromatin accessibility in mouse embryos produced by round spermatid injection von Sakamoto, Mizuki, Ito, Daiyu, Inoue, Rei, Wakayama, Sayaka, Kikuchi, Yasuyuki, Yang, Li, Hayashi, Erika, Emura, Rina, Shiura, Hirosuke, Kohda, Takashi, Namekawa, Satoshi H., Ishiuchi, Takashi, Wakayama, Teruhiko, Ooga, Masatoshi

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Bioinformatics Pipelines for Identification of Super-Enhancers and 3D Chromatin Contacts von Sakashita, Akihiko, Takeuchi, Chikara, Maezawa, So, Namekawa, Satoshi H.

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The RNase III Enzyme DROSHA Is Essential for MicroRNA Production and Spermatogenesis von Wu, Qiuxia, Song, Rui, Ortogero, Nicole, Zheng, Huili, Evanoff, Ryan, Small, Chris L., Griswold, Michael D., Namekawa, Satoshi H., Royo, Helene, Turner, James M., Yan, Wei

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Polycomb directs timely activation of germline genes in spermatogenesis von Maezawa, So, Hasegawa, Kazuteru, Yukawa, Masashi, Sakashita, Akihiko, Alavattam, Kris G, Andreassen, Paul R, Vidal, Miguel, Koseki, Haruhiko, Barski, Artem, Namekawa, Satoshi H

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Polycomb protein SCML2 facilitates H3K27me3 to establish bivalent domains in the male germline von Maezawa, So, Hasegawa, Kazuteru, Yukawa, Masashi, Kubo, Naoki, Sakashita, Akihiko, Alavattam, Kris G., Sin, Ho-Su, Kartashov, Andrey V., Sasaki, Hiroyuki, Barski, Artem, Namekawa, Satoshi H.

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RNF8 and SCML2 cooperate to regulate ubiquitination and H3K27 acetylation for escape gene activation on the sex chromosomes von Adams, Shannel R, Maezawa, So, Alavattam, Kris G, Abe, Hironori, Sakashita, Akihiko, Shroder, Megan, Broering, Tyler J, Sroga Rios, Julie, Thomas, Michael A, Lin, Xinhua, Price, Carolyn M, Barski, Artem, Andreassen, Paul R, Namekawa, Satoshi H

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PRC1-mediated epigenetic programming is required to generate the ovarian reserve von Hu, Mengwen, Yeh, Yu-Han, Munakata, Yasuhisa, Abe, Hironori, Sakashita, Akihiko, Maezawa, So, Vidal, Miguel, Koseki, Haruhiko, Hunter, Neil, Schultz, Richard M., Namekawa, Satoshi H.

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PRC1 suppresses a female gene regulatory network to ensure testicular differentiation von Maezawa, So, Yukawa, Masashi, Hasegawa, Kazuteru, Sugiyama, Ryo, Iizuka, Mizuho, Hu, Mengwen, Sakashita, Akihiko, Vidal, Miguel, Koseki, Haruhiko, Barski, Artem, DeFalco, Tony, Namekawa, Satoshi H.

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