A global view of standards for open image data formats and repositories von Swedlow, Jason R., Kankaanpää, Pasi, Sarkans, Ugis, Goscinski, Wojtek, Galloway, Graham, Malacrida, Leonel, Sullivan, Ryan P., Härtel, Steffen, Brown, Claire M., Wood, Christopher, Keppler, Antje, Paina, Federica, Loos, Ben, Zullino, Sara, Longo, Dario Livio, Aime, Silvio, Onami, Shuichi

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Biomarkers in autism spectrum disorder: the old and the new von Ruggeri, Barbara, Sarkans, Ugis, Schumann, Gunter, Persico, Antonio M.

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Image Data Resource: a bioimage data integration and publication platform von Williams, Eleanor, Moore, Josh, Li, Simon W, Rustici, Gabriella, Tarkowska, Aleksandra, Chessel, Anatole, Leo, Simone, Antal, Bálint, Ferguson, Richard K, Sarkans, Ugis, Brazma, Alvis, Carazo Salas, Rafael E, Swedlow, Jason R

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REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biology von Sarkans, Ugis, Chiu, Wah, Collinson, Lucy, Darrow, Michele C., Ellenberg, Jan, Grunwald, David, Hériché, Jean-Karim, Iudin, Andrii, Martins, Gabriel G., Meehan, Terry, Narayan, Kedar, Patwardhan, Ardan, Russell, Matthew Robert Geoffrey, Saibil, Helen R., Strambio-De-Castillia, Caterina, Swedlow, Jason R., Tischer, Christian, Uhlmann, Virginie, Verkade, Paul, Barlow, Mary, Bayraktar, Omer, Birney, Ewan, Catavitello, Cesare, Cawthorne, Christopher, Wagner-Conrad, Stephan, Duke, Elizabeth, Paul-Gilloteaux, Perrine, Gustin, Emmanuel, Harkiolaki, Maria, Kankaanpää, Pasi, Lemberger, Thomas, McEntyre, Jo, Moore, Josh, Nicholls, Andrew W., Onami, Shuichi, Parkinson, Helen, Parsons, Maddy, Romanchikova, Marina, Sofroniew, Nicholas, Swoger, Jim, Utz, Nadine, Voortman, Lenard M., Wong, Frances, Zhang, Peijun, Kleywegt, Gerard J., Brazma, Alvis

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Discovering and linking public omics data sets using the Omics Discovery Index von Perez-Riverol, Yasset, Bai, Mingze, da Veiga Leprevost, Felipe, Squizzato, Silvano, Park, Young Mi, Haug, Kenneth, Carroll, Adam J, Spalding, Dylan, Paschall, Justin, Wang, Mingxun, del-Toro, Noemi, Ternent, Tobias, Zhang, Peng, Buso, Nicola, Bandeira, Nuno, Deutsch, Eric W, Campbell, David S, Beavis, Ronald C, Salek, Reza M, Sarkans, Ugis, Petryszak, Robert, Keays, Maria, Fahy, Eoin, Sud, Manish, Subramaniam, Shankar, Barbera, Ariana, Jiménez, Rafael C, Nesvizhskii, Alexey I, Sansone, Susanna-Assunta, Steinbeck, Christoph, Lopez, Rodrigo, Vizcaíno, Juan A, Ping, Peipei, Hermjakob, Henning

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The BioStudies database von McEntyre, Jo, Sarkans, Ugis, Brazma, Alvis

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The EU-ToxRisk method documentation, data processing and chemical testing pipeline for the regulatory use of new approach methods von Krebs, Alice, van Vugt-Lussenburg, Barbara M. A., Waldmann, Tanja, Albrecht, Wiebke, Boei, Jan, ter Braak, Bas, Brajnik, Maja, Braunbeck, Thomas, Brecklinghaus, Tim, Busquet, Francois, Dinnyes, Andras, Dokler, Joh, Dolde, Xenia, Exner, Thomas E., Fisher, Ciarán, Fluri, David, Forsby, Anna, Hengstler, Jan G., Holzer, Anna-Katharina, Janstova, Zofia, Jennings, Paul, Kisitu, Jaffar, Kobolak, Julianna, Kumar, Manoj, Limonciel, Alice, Lundqvist, Jessica, Mihalik, Balázs, Moritz, Wolfgang, Pallocca, Giorgia, Ulloa, Andrea Paola Cediel, Pastor, Manuel, Rovida, Costanza, Sarkans, Ugis, Schimming, Johannes P., Schmidt, Bela Z., Stöber, Regina, Strassfeld, Tobias, van de Water, Bob, Wilmes, Anja, van der Burg, Bart, Verfaillie, Catherine M., von Hellfeld, Rebecca, Vrieling, Harry, Vrijenhoek, Nanette G., Leist, Marcel

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ArrayExpress update—simplifying data submissions von Kolesnikov, Nikolay, Hastings, Emma, Keays, Maria, Melnichuk, Olga, Tang, Y. Amy, Williams, Eleanor, Dylag, Miroslaw, Kurbatova, Natalja, Brandizi, Marco, Burdett, Tony, Megy, Karyn, Pilicheva, Ekaterina, Rustici, Gabriella, Tikhonov, Andrew, Parkinson, Helen, Petryszak, Robert, Sarkans, Ugis, Brazma, Alvis

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Ten recommendations for organising bioimaging data for archival [version 2; peer review: 3 approved, 1 approved with reservations] von Korir, Paul K., Iudin, Andrii, Somasundharam, Sriram, Weyand, Simone, Salih, Osman, Hartley, Matthew, Sarkans, Ugis, Patwardhan, Ardan, Kleywegt, Gerard J.

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A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB von Rayner, Tim F, Rocca-Serra, Philippe, Spellman, Paul T, Causton, Helen C, Farne, Anna, Holloway, Ele, Irizarry, Rafael A, Liu, Junmin, Maier, Donald S, Miller, Michael, Petersen, Kjell, Quackenbush, John, Sherlock, Gavin, Stoeckert, Jr, Christian J, White, Joseph, Whetzel, Patricia L, Wymore, Farrell, Parkinson, Helen, Sarkans, Ugis, Ball, Catherine A, Brazma, Alvis

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Human metabolic profiles are stably controlled by genetic and environmental variation von Nicholson, George, Rantalainen, Mattias, Maher, Anthony D, Li, Jia V, Malmodin, Daniel, Ahmadi, Kourosh R, Faber, Johan H, Hallgrímsdóttir, Ingileif B, Barrett, Amy, Toft, Henrik, Krestyaninova, Maria, Viksna, Juris, Neogi, Sudeshna Guha, Dumas, Marc‐Emmanuel, Sarkans, Ugis, Silverman, Bernard W, Donnelly, Peter, Nicholson, Jeremy K, Allen, Maxine, Zondervan, Krina T, Lindon, John C, Spector, Tim D, McCarthy, Mark I, Holmes, Elaine, Baunsgaard, Dorrit, Holmes, Chris C

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Minimum information about a microarray experiment (MIAME)—toward standards for microarray data von Brazma, Alvis, Hingamp, Pascal, Quackenbush, John, Sherlock, Gavin, Spellman, Paul, Stoeckert, Chris, Aach, John, Ansorge, Wilhelm, Ball, Catherine A., Causton, Helen C., Gaasterland, Terry, Glenisson, Patrick, Holstege, Frank C.P., Kim, Irene F., Markowitz, Victor, Matese, John C., Parkinson, Helen, Robinson, Alan, Sarkans, Ugis, Schulze-Kremer, Steffen, Stewart, Jason, Taylor, Ronald, Vilo, Jaak, Vingron, Martin

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The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data von Hermjakob, Henning, Montecchi-Palazzi, Luisa, Bader, Gary, Wojcik, Jérôme, Salwinski, Lukasz, Ceol, Arnaud, Moore, Susan, Orchard, Sandra, Sarkans, Ugis, von Mering, Christian, Roechert, Bernd, Poux, Sylvain, Jung, Eva, Mersch, Henning, Kersey, Paul, Lappe, Michael, Li, Yixue, Zeng, Rong, Rana, Debashis, Nikolski, Macha, Husi, Holger, Brun, Christine, Shanker, K, Grant, Seth G N, Sander, Chris, Bork, Peer, Zhu, Weimin, Pandey, Akhilesh, Brazma, Alvis, Jacq, Bernard, Vidal, Marc, Sherman, David, Legrain, Pierre, Cesareni, Gianni, Xenarios, Ioannis, Eisenberg, David, Steipe, Boris, Hogue, Chris, Apweiler, Rolf

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A genome-wide metabolic QTL analysis in Europeans implicates two loci shaped by recent positive selection von Nicholson, George, Rantalainen, Mattias, Li, Jia V, Maher, Anthony D, Malmodin, Daniel, Ahmadi, Kourosh R, Faber, Johan H, Barrett, Amy, Min, Josine L, Rayner, N William, Toft, Henrik, Krestyaninova, Maria, Viksna, Juris, Neogi, Sudeshna Guha, Dumas, Marc-Emmanuel, Sarkans, Ugis, Donnelly, Peter, Illig, Thomas, Adamski, Jerzy, Suhre, Karsten, Allen, Maxine, Zondervan, Krina T, Spector, Tim D, Nicholson, Jeremy K, Lindon, John C, Baunsgaard, Dorrit, Holmes, Elaine, McCarthy, Mark I, Holmes, Chris C

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Multi-omics HeCaToS dataset of repeated dose toxicity for cardiotoxic & hepatotoxic compounds von Verheijen, Marcha, Sarkans, Ugis, Wolski, Witold, Jennen, Danyel, Caiment, Florian, Kleinjans, Jos

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Data-deposition protocols for correlative soft X-ray tomography and super-resolution structured illumination microscopy applications von Iudin, Andrii, Sarkans, Ugis, Koronfel, Mohamed A., Fish, Tom, Dobbie, Ian, Harkiolaki, Maria, Patwardhan, Ardan, Kleywegt, Gerard J.

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The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics von Jones, Andrew R, Miller, Michael, Aebersold, Ruedi, Apweiler, Rolf, Ball, Catherine A, Brazma, Alvis, DeGreef, James, Hardy, Nigel, Hermjakob, Henning, Hubbard, Simon J, Hussey, Peter, Igra, Mark, Jenkins, Helen, Julian, Randall K, Laursen, Kent, Oliver, Stephen G, Paton, Norman W, Sansone, Susanna-Assunta, Sarkans, Ugis, Stoeckert, Christian J, Taylor, Chris F, Whetzel, Patricia L, White, Joseph A, Spellman, Paul, Pizarro, Angel

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ArrayExpress update – from bulk to single-cell expression data von Athar, Awais, Füllgrabe, Anja, George, Nancy, Iqbal, Haider, Huerta, Laura, Ali, Ahmed, Snow, Catherine, Fonseca, Nuno A, Petryszak, Robert, Papatheodorou, Irene, Sarkans, Ugis, Brazma, Alvis

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The BioImage Archive – Building a Home for Life-Sciences Microscopy Data von Hartley, Matthew, Kleywegt, Gerard J., Patwardhan, Ardan, Sarkans, Ugis, Swedlow, Jason R., Brazma, Alvis

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ArrayExpress update--simplifying data submissions von Kolesnikov, Nikolay, Hastings, Emma, Keays, Maria, Melnichuk, Olga, Tang, Y Amy, Williams, Eleanor, Dylag, Miroslaw, Kurbatova, Natalja, Brandizi, Marco, Burdett, Tony, Megy, Karyn, Pilicheva, Ekaterina, Rustici, Gabriella, Tikhonov, Andrew, Parkinson, Helen, Petryszak, Robert, Sarkans, Ugis, Brazma, Alvis

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