High-resolution, strand-specific R-loop mapping via S9.6-based DNA–RNA immunoprecipitation and high-throughput sequencing von Sanz, Lionel A., Chédin, Frédéric

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Transcription-associated R-loop formation across the human FMR1 CGG-repeat region von Loomis, Erick W, Sanz, Lionel A, Chédin, Frédéric, Hagerman, Paul J

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Best practices for the visualization, mapping, and manipulation of R‐loops von Chédin, Frédéric, Hartono, Stella R, Sanz, Lionel A, Vanoosthuyse, Vincent

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Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals von Sanz, Lionel A., Hartono, Stella R., Lim, Yoong Wearn, Steyaert, Sandra, Rajpurkar, Aparna, Ginno, Paul A., Xu, Xiaoqin, Chédin, Frédéric

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Recognition of RNA by the S9.6 antibody creates pervasive artifacts when imaging RNA:DNA hybrids von Smolka, John A, Sanz, Lionel A, Hartono, Stella R, Chédin, Frédéric

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Topoisomerase 1 prevents replication stress at R-loop-enriched transcription termination sites von Promonet, Alexy, Padioleau, Ismaël, Liu, Yaqun, Sanz, Lionel, Biernacka, Anna, Schmitz, Anne-Lyne, Skrzypczak, Magdalena, Sarrazin, Amélie, Mettling, Clément, Rowicka, Maga, Ginalski, Krzysztof, Chedin, Frédéric, Chen, Chun-Long, Lin, Yea-Lih, Pasero, Philippe

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DNA Topoisomerase I differentially modulates R-loops across the human genome von Manzo, Stefano G, Hartono, Stella R, Sanz, Lionel A, Marinello, Jessica, De Biasi, Sara, Cossarizza, Andrea, Capranico, Giovanni, Chedin, Frederic

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Co-transcriptional R-loops are the main cause of estrogen-induced DNA damage von Stork, Caroline Townsend, Bocek, Michael, Crossley, Madzia P, Sollier, Julie, Sanz, Lionel A, Chédin, Frédéric, Swigut, Tomek, Cimprich, Karlene A

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Ultra-deep Coverage Single-molecule R-loop Footprinting Reveals Principles of R-loop Formation von Malig, Maika, Hartono, Stella R., Giafaglione, Jenna M., Sanz, Lionel A., Chedin, Frederic

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Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome von Lim, Yoong Wearn, Sanz, Lionel A, Xu, Xiaoqin, Hartono, Stella R, Chédin, Frédéric

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RNA-DNA strand exchange by the Drosophila Polycomb complex PRC2 von Alecki, Célia, Chiwara, Victoria, Sanz, Lionel A., Grau, Daniel, Arias Pérez, Osvaldo, Boulier, Elodie L., Armache, Karim-Jean, Chédin, Frédéric, Francis, Nicole J.

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The Air Noncoding RNA Epigenetically Silences Transcription by Targeting G9a to Chromatin von Nagano, Takashi, Mitchell, Jennifer A., Sanz, Lionel A., Pauler, Florian M., Ferguson-Smith, Anne C., Feil, Robert, Fraser, Peter

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EHMT2 directs DNA methylation for efficient gene silencing in mouse embryos von Auclair, Ghislain, Borgel, Julie, Sanz, Lionel A, Vallet, Judith, Guibert, Sylvain, Dumas, Michael, Cavelier, Patricia, Girardot, Michael, Forné, Thierry, Feil, Robert, Weber, Michael

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Mapping R-Loops and RNA:DNA Hybrids with S9.6-Based Immunoprecipitation Methods von Sanz, Lionel A., Castillo-Guzman, Daisy, Chédin, Frédéric

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SETX (senataxin), the helicase mutated in AOA2 and ALS4, functions in autophagy regulation von Richard, Patricia, Feng, Shuang, Tsai, Yueh-Lin, Li, Wencheng, Rinchetti, Paola, Muhith, Ubayed, Irizarry-Cole, Juan, Stolz, Katharine, Sanz, Lionel A., Hartono, Stella, Hoque, Mainul, Tadesse, Saba, Seitz, Hervé, Lotti, Francesco, Hirano, Michio, Chédin, Frédéric, Tian, Bin, Manley, James L.

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Genomic patterns of transcription–replication interactions in mouse primary B cells von St Germain, Commodore P, Zhao, Hongchang, Sinha, Vrishti, Sanz, Lionel A, Chédin, Frédéric, Barlow, Jacqueline H

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CARM1 Inhibition Enables Immunotherapy of Resistant Tumors by Dual Action on Tumor Cells and T Cells von Kumar, Sushil, Zeng, Zexian, Bagati, Archis, Tay, Rong En, Sanz, Lionel A, Hartono, Stella R, Ito, Yoshinaga, Abderazzaq, Fieda, Hatchi, Elodie, Jiang, Peng, Cartwright, Adam N R, Olawoyin, Olamide, Mathewson, Nathan D, Pyrdol, Jason W, Li, Mamie Z, Doench, John G, Booker, Matthew A, Tolstorukov, Michael Y, Elledge, Stephen J, Chédin, Frédéric, Liu, X Shirley, Wucherpfennig, Kai W

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Histone methylation is mechanistically linked to DNA methylation at imprinting control regions in mammals von Henckel, Amandine, Nakabayashi, Kazuhiko, Sanz, Lionel A., Feil, Robert, Hata, Kenichiro, Arnaud, Philippe

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Senataxin and RNase H2 act redundantly to suppress genome instability during class switch recombination von Zhao, Hongchang, Hartono, Stella R, de Vera, Kirtney Mae Flores, Yu, Zheyuan, Satchi, Krishni, Zhao, Tracy, Sciammas, Roger, Sanz, Lionel, Chédin, Frédéric, Barlow, Jacqueline

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A mono-allelic bivalent chromatin domain controls tissue-specific imprinting at Grb10 von Sanz, Lionel A, Chamberlain, Stormy, Sabourin, Jean-Charles, Henckel, Amandine, Magnuson, Terry, Hugnot, Jean-Philippe, Feil, Robert, Arnaud, Philippe

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