Theta-gamma phase amplitude coupling in a hippocampal CA1 microcircuit von Ponzi, Adam, Dura-Bernal, Salvador, Migliore, Michele

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Integrating machine learning and multiscale modeling—perspectives, challenges, and opportunities in the biological, biomedical, and behavioral sciences von Alber, Mark, Buganza Tepole, Adrian, Cannon, William R., De, Suvranu, Dura-Bernal, Salvador, Garikipati, Krishna, Karniadakis, George, Lytton, William W., Perdikaris, Paris, Petzold, Linda, Kuhl, Ellen

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NetPyNE, a tool for data-driven multiscale modeling of brain circuits von Dura-Bernal, Salvador, Suter, Benjamin A, Gleeson, Padraig, Cantarelli, Matteo, Quintana, Adrian, Rodriguez, Facundo, Kedziora, David J, Chadderdon, George L, Kerr, Cliff C, Neymotin, Samuel A, McDougal, Robert A, Hines, Michael, Shepherd, Gordon Mg, Lytton, William W

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Evaluation and comparison of methods for neuronal parameter optimization using the Neuroptimus software framework von Mohácsi, Máté, Török, Márk Patrik, Sáray, Sára, Tar, Luca, Farkas, Gábor, Káli, Szabolcs

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Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits von Gleeson, Padraig, Cantarelli, Matteo, Marin, Boris, Quintana, Adrian, Earnshaw, Matt, Sadeh, Sadra, Piasini, Eugenio, Birgiolas, Justas, Cannon, Robert C., Cayco-Gajic, N. Alex, Crook, Sharon, Davison, Andrew P., Dura-Bernal, Salvador, Ecker, András, Hines, Michael L., Idili, Giovanni, Lanore, Frederic, Larson, Stephen D., Lytton, William W., Majumdar, Amitava, McDougal, Robert A., Sivagnanam, Subhashini, Solinas, Sergio, Stanislovas, Rokas, van Albada, Sacha J., van Geit, Werner, Silver, R. Angus

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Multiscale model of primary motor cortex circuits predicts in vivo cell-type-specific, behavioral state-dependent dynamics von Dura-Bernal, Salvador, Neymotin, Samuel A., Suter, Benjamin A., Dacre, Joshua, Moreira, Joao V.S., Urdapilleta, Eugenio, Schiemann, Julia, Duguid, Ian, Shepherd, Gordon M.G., Lytton, William W.

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A mechanism for deviance detection and contextual routing in the thalamus: a review and theoretical proposal von Varela, Carmen, Moreira, Joao V S, Kocaoglu, Basak, Dura-Bernal, Salvador, Ahmad, Subutai

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Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics von Dura-Bernal, Salvador, Griffith, Erica Y., Barczak, Annamaria, O’Connell, Monica N., McGinnis, Tammy, Moreira, Joao V.S., Schroeder, Charles E., Lytton, William W., Lakatos, Peter, Neymotin, Samuel A.

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The SONATA data format for efficient description of large-scale network models von Dai, Kael, Hernando, Juan, Billeh, Yazan N, Gratiy, Sergey L, Planas, Judit, Davison, Andrew P, Dura-Bernal, Salvador, Gleeson, Padraig, Devresse, Adrien, Dichter, Benjamin K, Gevaert, Michael, King, James G, Van Geit, Werner A H, Povolotsky, Arseny V, Muller, Eilif, Courcol, Jean-Denis, Arkhipov, Anton

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Training a spiking neuronal network model of visual-motor cortex to play a virtual racket-ball game using reinforcement learning von Anwar, Haroon, Caby, Simon, Dura-Bernal, Salvador, D'Onofrio, David, Hasegan, Daniel, Deible, Matt, Grunblatt, Sara, Chadderdon, George L, Kerr, Cliff C, Lakatos, Peter, Lytton, William W, Hazan, Hananel, Neymotin, Samuel A

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Modernizing the NEURON Simulator for Sustainability, Portability, and Performance von Awile, Omar, Kumbhar, Pramod, Cornu, Nicolas, Dura-Bernal, Salvador, King, James Gonzalo, Lupton, Olli, Magkanaris, Ioannis, McDougal, Robert A, Newton, Adam J H, Pereira, Fernando, Săvulescu, Alexandru, Carnevale, Nicholas T, Lytton, William W, Hines, Michael L, Schürmann, Felix

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Large-scale biophysically detailed model of somatosensory thalamocortical circuits in NetPyNE von Borges, Fernando S, Moreira, Joao V S, Takarabe, Lavinia M, Lytton, William W, Dura-Bernal, Salvador

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Optimization by Adaptive Stochastic Descent von Kerr, Cliff C, Dura-Bernal, Salvador, Smolinski, Tomasz G, Chadderdon, George L, Wilson, David P

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Top-down feedback in an HMAX-like cortical model of object perception based on hierarchical Bayesian networks and belief propagation von Dura-Bernal, Salvador, Wennekers, Thomas, Denham, Susan L

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Correction: Borges et al. The Roles of Potassium and Calcium Currents in the Bistable Firing Transition. Brain Sci. 2023, 13 , 1347 von Borges, Fernando S, Protachevicz, Paulo R, Souza, Diogo L M, Bittencourt, Conrado F, Gabrick, Enrique C, Bentivoglio, Lucas E, Szezech, Jr, José D, Batista, Antonio M, Caldas, Iberê L, Dura-Bernal, Salvador, Pena, Rodrigo F O

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Multiscale Modeling Meets Machine Learning: What Can We Learn? von Peng, Grace C. Y., Alber, Mark, Buganza Tepole, Adrian, Cannon, William R., De, Suvranu, Dura-Bernal, Savador, Garikipati, Krishna, Karniadakis, George, Lytton, William W., Perdikaris, Paris, Petzold, Linda, Kuhl, Ellen

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The Roles of Potassium and Calcium Currents in the Bistable Firing Transition von Borges, Fernando S, Protachevicz, Paulo R, Souza, Diogo L M, Bittencourt, Conrado F, Gabrick, Enrique C, Bentivoglio, Lucas E, Szezech, Jr, José D, Batista, Antonio M, Caldas, Iberê L, Dura-Bernal, Salvador, Pena, Rodrigo F O

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Multiscale Computer Model of the Spinal Dorsal Horn Reveals Changes in Network Processing Associated with Chronic Pain von Medlock, Laura, Sekiguchi, Kazutaka, Hong, Sungho, Dura-Bernal, Salvador, Lytton, William W, Prescott, Steven A

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The NeuroML ecosystem for standardized multi-scale modeling in neuroscience von Sinha, Ankur, Gleeson, Padraig, Marin, Bóris, Dura-Bernal, Salvador, Panagiotou, Sotirios, Crook, Sharon, Cantarelli, Matteo, Cannon, Robert C, Davison, Andrew P, Gurnani, Harsha, Silver, Robin Angus

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NetPyNE Implementation and Scaling of the Potjans-Diesmann Cortical Microcircuit Model von Romaro, Cecilia, Najman, Fernando Araujo, Lytton, William W., Roque, Antonio C., Dura-Bernal, Salvador

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