ESCRT-III is required for scissioning new peroxisomes from the endoplasmic reticulum von Mast, Fred D, Herricks, Thurston, Strehler, Kathleen M, Miller, Leslie R, Saleem, Ramsey A, Rachubinski, Richard A, Aitchison, John D

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Use of a small molecule cell cycle inhibitor to control cell growth and improve specific productivity and product quality of recombinant proteins in CHO cell cultures von Du, Zhimei, Treiber, David, McCarter, John D., Fomina-Yadlin, Dina, Saleem, Ramsey A., McCoy, Rebecca E., Zhang, Yuling, Tharmalingam, Tharmala, Leith, Matthew, Follstad, Brian D., Dell, Brad, Grisim, Brent, Zupke, Craig, Heath, Carole, Morris, Arvia E., Reddy, Pranhitha

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Role of the Histone Variant H2A.Z/Htz1p in TBP Recruitment, Chromatin Dynamics, and Regulated Expression of Oleate-Responsive Genes von Wan, Yakun, Saleem, Ramsey A., Ratushny, Alexander V., Roda, Oriol, Smith, Jennifer J., Lin, Chan-Hsien, Chiang, Jung-Hsien, Aitchison, John D.

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Asymmetric positive feedback loops reliably control biological responses von Ratushny, Alexander V, Saleem, Ramsey A, Sitko, Katherine, Ramsey, Stephen A, Aitchison, John D

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Genome-Wide Analysis of Signaling Networks Regulating Fatty Acid-Induced Gene Expression and Organelle Biogenesis von Saleem, Ramsey A., Knoblach, Barbara, Mast, Fred D., Smith, Jennifer J., Boyle, John, Dobson, C. Melissa, Long-O'Donnell, Rose, Rachubinski, Richard A., Aitchison, John D.

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Transcriptional responses to fatty acid are coordinated by combinatorial control von Aitchison, John D, Smith, Jennifer J, Ramsey, Stephen A, Marelli, Marcello, Marzolf, Bruz, Hwang, Daehee, Saleem, Ramsey A, Rachubinski, Richard A

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Genome-wide analysis of effectors of peroxisome biogenesis von Saleem, Ramsey A, Long-O'Donnell, Rose, Dilworth, David J, Armstrong, Abraham M, Jamakhandi, Arvind P, Wan, Yakun, Knijnenburg, Theo A, Niemistö, Antti, Boyle, John, Rachubinski, Richard A, Shmulevich, Ilya, Aitchison, John D

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Histone chaperone Chz1p regulates H2B ubiquitination and subtelomeric anti-silencing von Wan, Yakun, Chiang, Jung-Hsien, Lin, Chan-Hsien, Arens, Christina E, Saleem, Ramsey A, Smith, Jennifer J, Aitchison, John D

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Peroxins Pex30 and Pex29 Dynamically Associate with Reticulons to Regulate Peroxisome Biogenesis from the Endoplasmic Reticulum von Mast, Fred D., Jamakhandi, Arvind, Saleem, Ramsey A., Dilworth, David J., Rogers, Richard S., Rachubinski, Richard A., Aitchison, John D.

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FOXC1 Transcriptional Regulation Is Mediated by N- and C-terminal Activation Domains and Contains a Phosphorylated Transcriptional Inhibitory Domain von Berry, Fred B., Saleem, Ramsey A., Walter, Michael A.

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Nanospray FAIMS Fractionation Provides Significant Increases in Proteome Coverage of Unfractionated Complex Protein Digests von Swearingen, Kristian E., Hoopmann, Michael R., Johnson, Richard S., Saleem, Ramsey A., Aitchison, John D., Moritz, Robert L.

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A chemical and computational approach to comprehensive glycation characterization on antibodies von Saleem, Ramsey A, Affholter, Brittany R, Deng, Sihong, Campbell, Phil C, Matthies, Kelli, Eakin, Catherine M, Wallace, Alison

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Molecular mechanisms of system responses to novel stimuli are predictable from public data von Danziger, Samuel A, Ratushny, Alexander V, Smith, Jennifer J, Saleem, Ramsey A, Wan, Yakun, Arens, Christina E, Armstrong, Abraham M, Sitko, Katherine, Chen, Wei-Ming, Chiang, Jung-Hsien, Reiss, David J, Baliga, Nitin S, Aitchison, John D

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Global Analysis of Condition-specific Subcellular Protein Distribution and Abundance von Jung, Sunhee, Smith, Jennifer J., von Haller, Priska D., Dilworth, David J., Sitko, Katherine A., Miller, Leslie R., Saleem, Ramsey A., Goodlett, David R., Aitchison, John D.

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Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane von Marelli, Marcello, Smith, Jennifer J, Jung, Sunhee, Yi, Eugene, Nesvizhskii, Alexey I, Christmas, Rowan H, Saleem, Ramsey A, Tam, Yuen Yi C, Fagarasanu, Andrei, Goodlett, David R, Aebersold, Ruedi, Rachubinski, Richard A, Aitchison, John D

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Integrated Phosphoproteomics Analysis of a Signaling Network Governing Nutrient Response and Peroxisome Induction von Saleem, Ramsey A., Rogers, Richard S., Ratushny, Alexander V., Dilworth, David J., Shannon, Paul T., Shteynberg, David, Wan, Yakun, Moritz, Robert L., Nesvizhskii, Alexey I., Rachubinski, Richard A., Aitchison, John D.

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Structural and functional analyses of disease-causing missense mutations in the forkhead domain of FOXC1 von Saleem, Ramsey A., Banerjee-Basu, Sharmila, Berry, Fred B., Baxevanis, Andreas D., Walter, Michael A.

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Systems cell biology of the mitotic spindle von Saleem, Ramsey A, Aitchison, John D

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QTIPS: A Novel Method of Unsupervised Determination of Isotopic Amino Acid Distribution in SILAC Experiments von Dilworth, David J., Saleem, Ramsey A., Rogers, Richard S., Mirzaei, Hamid, Boyle, John, Aitchison, John D.

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Analyses of the Effects That Disease-Causing Missense Mutations Have on the Structure and Function of the Winged-Helix Protein FOXC1 von Saleem, Ramsey A., Banerjee-Basu, Sharmila, Berry, Fred B., Baxevanis, Andreas D., Walter, Michael A.

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