KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes von Steiner, Andreas, Stucki, David, Coscolla, Mireia, Borrell, Sonia, Gagneux, Sebastien

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Impaired mTORC1-Dependent Expression of Homer-3 Influences SCA1 Pathophysiology von Ruegsegger, Céline, Stucki, David M., Steiner, Silvio, Angliker, Nico, Radecke, Julika, Keller, Eva, Zuber, Benoît, Rüegg, Markus A., Saxena, Smita

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Mitochondrial impairments contribute to Spinocerebellar ataxia type 1 progression and can be ameliorated by the mitochondria-targeted antioxidant MitoQ von Stucki, David M., Ruegsegger, Céline, Steiner, Silvio, Radecke, Julika, Murphy, Michael P., Zuber, Benoît, Saxena, Smita

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Evaluating the Growth Potential of Pathogenic Bacteria in Water von Vital, Marius, Stucki, David, Egli, Thomas, Hammes, Frederik

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CNP mediated selective toxicity on melanoma cells is accompanied by mitochondrial dysfunction von Aplak, Elif, von Montfort, Claudia, Haasler, Lisa, Stucki, David, Steckel, Bodo, Reichert, Andreas S., Stahl, Wilhelm, Brenneisen, Peter

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In vitro selective cytotoxicity of the dietary chalcone cardamonin (CD) on melanoma compared to healthy cells is mediated by apoptosis von Berning, Lena, Scharf, Lisa, Aplak, Elif, Stucki, David, von Montfort, Claudia, Reichert, Andreas S, Stahl, Wilhelm, Brenneisen, Peter

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Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages von Stucki, David, Malla, Bijaya, Hostettler, Simon, Huna, Thembela, Feldmann, Julia, Yeboah-Manu, Dorothy, Borrell, Sonia, Fenner, Lukas, Comas, Iñaki, Coscollà, Mireia, Gagneux, Sebastien

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Evaluation of spoligotyping, SNPs and customised MIRU-VNTR combination for genotyping Mycobacterium tuberculosis clinical isolates in Madagascar von Rasoahanitralisoa, Rondroarivelo, Rakotosamimanana, Niaina, Stucki, David, Sola, Christophe, Gagneux, Sebastien, Rasolofo Razanamparany, Voahangy

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Acquired Resistance to Bedaquiline and Delamanid in Therapy for Tuberculosis von Bloemberg, Guido V., Keller, Peter M., Stucki, David, Trauner, Andrej, Borrell, Sonia, Latshang, Tsogyal, Coscolla, Mireia, Rothe, Thomas, Hömke, Rico, Ritter, Claudia, Feldmann, Julia, Schulthess, Bettina, Gagneux, Sebastien, Böttger, Erik C.

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A chromosome-level reference genome and pangenome for barn swallow population genomics von Secomandi, Simona, Gallo, Guido R., Sozzoni, Marcella, Iannucci, Alessio, Galati, Elena, Abueg, Linelle, Balacco, Jennifer, Caprioli, Manuela, Chow, William, Ciofi, Claudio, Collins, Joanna, Fedrigo, Olivier, Ferretti, Luca, Fungtammasan, Arkarachai, Haase, Bettina, Howe, Kerstin, Kwak, Woori, Lombardo, Gianluca, Masterson, Patrick, Messina, Graziella, Møller, Anders P., Mountcastle, Jacquelyn, Mousseau, Timothy A., Ferrer Obiol, Joan, Olivieri, Anna, Rhie, Arang, Rubolini, Diego, Saclier, Marielle, Stanyon, Roscoe, Stucki, David, Thibaud-Nissen, Françoise, Torrance, James, Torroni, Antonio, Weber, Kristina, Ambrosini, Roberto, Bonisoli-Alquati, Andrea, Jarvis, Erich D., Gianfranceschi, Luca, Formenti, Giulio

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Mycobacterium africanum is associated with patient ethnicity in Ghana von Asante-Poku, Adwoa, Yeboah-Manu, Dorothy, Otchere, Isaac Darko, Aboagye, Samuel Y, Stucki, David, Hattendorf, Jan, Borrell, Sonia, Feldmann, Julia, Danso, Emelia, Gagneux, Sebastien

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Genotypic diversity and drug susceptibility patterns among M. tuberculosis complex isolates from South-Western Ghana von Yeboah-Manu, Dorothy, Asante-Poku, Adwoa, Bodmer, Thomas, Stucki, David, Koram, Kwadwo, Bonsu, Frank, Pluschke, Gerd, Gagneux, Sebastien

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Tuberculosis outbreak investigation using phylodynamic analysis von Kühnert, Denise, Coscolla, Mireia, Brites, Daniela, Stucki, David, Metcalfe, John, Fenner, Lukas, Gagneux, Sebastien, Stadler, Tanja

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HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis von Fenner, Lukas, Egger, Matthias, Bodmer, Thomas, Furrer, Hansjakob, Ballif, Marie, Battegay, Manuel, Helbling, Peter, Fehr, Jan, Gsponer, Thomas, Rieder, Hans L, Zwahlen, Marcel, Hoffmann, Matthias, Bernasconi, Enos, Cavassini, Matthias, Calmy, Alexandra, Dolina, Marisa, Frei, Reno, Janssens, Jean-Paul, Borrell, Sonia, Stucki, David, Schrenzel, Jacques, Böttger, Erik C, Gagneux, Sebastien

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"Pseudo-Beijing": evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis von Fenner, Lukas, Malla, Bijaya, Ninet, Béatrice, Dubuis, Olivier, Stucki, David, Borrell, Sonia, Huna, Thembela, Bodmer, Thomas, Egger, Matthias, Gagneux, Sebastien

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First insights into the phylogenetic diversity of Mycobacterium tuberculosis in Nepal von Malla, Bijaya, Stucki, David, Borrell, Sonia, Feldmann, Julia, Maharjan, Bhagwan, Shrestha, Bhawana, Fenner, Lukas, Gagneux, Sebastien

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Endogenous Carbon Monoxide Signaling Modulates Mitochondrial Function and Intracellular Glucose Utilization: Impact of the Heme Oxygenase Substrate Hemin von Stucki, David, Steinhausen, Julia, Westhoff, Philipp, Krahl, Heide, Brilhaus, Dominik, Massenberg, Annika, Weber, Andreas P. M., Reichert, Andreas S., Brenneisen, Peter, Stahl, Wilhelm

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Multiple Introductions of Mycobacterium tuberculosis Lineage 2–Beijing Into Africa Over Centuries von Rutaihwa, Liliana K., Menardo, Fabrizio, Stucki, David, Gygli, Sebastian M., Ley, Serej D., Malla, Bijaya, Feldmann, Julia, Borrell, Sonia, Beisel, Christian, Middelkoop, Kerren, Carter, E. Jane, Diero, Lameck, Ballif, Marie, Jugheli, Levan, Reither, Klaus, Fenner, Lukas, Brites, Daniela, Gagneux, Sebastien

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Single nucleotide polymorphisms in Mycobacterium tuberculosis and the need for a curated database von Stucki, David, Gagneux, Sebastien

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Effects of frequently applied carbon monoxide releasing molecules (CORMs) in typical CO-sensitive model systems – A comparative in vitro study von Stucki, David, Krahl, Heide, Walter, Moritz, Steinhausen, Julia, Hommel, Katrin, Brenneisen, Peter, Stahl, Wilhelm

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