De novo identification of differentially methylated regions in the human genome von Peters, Timothy J, Buckley, Michael J, Statham, Aaron L, Pidsley, Ruth, Samaras, Katherine, V Lord, Reginald, Clark, Susan J, Molloy, Peter L

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Regional Activation of the Cancer Genome by Long-Range Epigenetic Remodeling von Bert, Saul A., Robinson, Mark D., Strbenac, Dario, Statham, Aaron L., Song, Jenny Z., Hulf, Toby, Sutherland, Robert L., Coolen, Marcel W., Stirzaker, Clare, Clark, Susan J.

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Reconfiguration of nucleosome-depleted regions at distal regulatory elements accompanies DNA methylation of enhancers and insulators in cancer von Taberlay, Phillippa C, Statham, Aaron L, Kelly, Theresa K, Clark, Susan J, Jones, Peter A

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Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains von Khoury, Amanda, Achinger-Kawecka, Joanna, Bert, Saul A., Smith, Grady C., French, Hugh J., Luu, Phuc-Loi, Peters, Timothy J., Du, Qian, Parry, Aled J., Valdes-Mora, Fatima, Taberlay, Phillippa C., Stirzaker, Clare, Statham, Aaron L., Clark, Susan J.

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Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA von Statham, Aaron L, Robinson, Mark D, Song, Jenny Z, Coolen, Marcel W, Stirzaker, Clare, Clark, Susan J

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Genomic profiling of CpG methylation and allelic specificity using quantitative high-throughput mass spectrometry: critical evaluation and improvements von Coolen, Marcel W, Statham, Aaron L, Gardiner-Garden, Margaret, Clark, Susan J

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Genome sequencing as a first-line genetic test in familial dilated cardiomyopathy von Minoche, Andre E., Horvat, Claire, Johnson, Renee, Gayevskiy, Velimir, Morton, Sarah U., Drew, Alexander P., Woo, Kerhan, Statham, Aaron L., Lundie, Ben, Bagnall, Richard D., Ingles, Jodie, Semsarian, Christopher, Seidman, J. G., Seidman, Christine E., Dinger, Marcel E., Cowley, Mark J., Fatkin, Diane

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Acetylated histone variant H2A.Z is involved in the activation of neo-enhancers in prostate cancer von Valdés-Mora, Fátima, Gould, Cathryn M., Colino-Sanguino, Yolanda, Qu, Wenjia, Song, Jenny Z., Taylor, Kylie M., Buske, Fabian A., Statham, Aaron L., Nair, Shalima S., Armstrong, Nicola J., Kench, James G., Lee, Kenneth M. L., Horvath, Lisa G., Qiu, Minru, Ilinykh, Alexei, Yeo-Teh, Nicole S., Gallego-Ortega, David, Stirzaker, Clare, Clark, Susan J.

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Impact of the genome on the epigenome is manifested in DNA methylation patterns of imprinted regions in monozygotic and dizygotic twins von Coolen, Marcel W, Statham, Aaron L, Qu, Wenjia, Campbell, Megan J, Henders, Anjali K, Montgomery, Grant W, Martin, Nick G, Clark, Susan J

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Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias von Nair, Shalima S., Coolen, Marcel W., Stirzaker, Clare, Song, Jenny Z., Statham, Aaron L., Strbenac, Dario, Robinson, Mark D., Clark, Susan J.

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Discovery pipeline for epigenetically deregulated miRNAs in cancer: integration of primary miRNA transcription von Hulf, Toby, Sibbritt, Tennille, Wiklund, Erik D, Bert, Saul, Strbenac, Dario, Statham, Aaron L, Robinson, Mark D, Clark, Susan J

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miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA von Hansen, Thomas B, Wiklund, Erik D, Bramsen, Jesper B, Villadsen, Sune B, Statham, Aaron L, Clark, Susan J, Kjems, Jørgen

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Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variation von Robinson, Mark D, Stirzaker, Clare, Statham, Aaron L, Coolen, Marcel W, Song, Jenny Z, Nair, Shalima S, Strbenac, Dario, Speed, Terence P, Clark, Susan J

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Prognostic and diagnostic significance of DNA methylation patterns in high grade serous ovarian cancer von Montavon, Céline, Gloss, Brian S, Warton, Kristina, Barton, Caroline A, Statham, Aaron L, Scurry, James P, Tabor, Bruce, Nguyen, Tuan V, Qu, Wenja, Samimi, Goli, Hacker, Neville F, Sutherland, Robert L, Clark, Susan J, O'Brien, Philippa M

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Mining cancer methylomes: prospects and challenges von Stirzaker, Clare, Taberlay, Phillippa C, Statham, Aaron L, Clark, Susan J

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miRNA‐dependent gene silencing involving Ago2‐mediated cleavage of a circular antisense RNA von Hansen, Thomas B, Wiklund, Erik D, Bramsen, Jesper B, Villadsen, Sune B, Statham, Aaron L, Clark, Susan J, Kjems, Jørgen

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Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer von Valdés-Mora, Fátima, Song, Jenny Z, Statham, Aaron L, Strbenac, Dario, Robinson, Mark D, Nair, Shalima S, Patterson, Kate I, Tremethick, David J, Stirzaker, Clare, Clark, Susan J

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The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly von Pinese, Mark, Lacaze, Paul, Rath, Emma M., Stone, Andrew, Brion, Marie-Jo, Ameur, Adam, Nagpal, Sini, Puttick, Clare, Husson, Shane, Degrave, Dmitry, Cristina, Tina Navin, Kahl, Vivian F. S., Statham, Aaron L., Woods, Robyn L., McNeil, John J., Riaz, Moeen, Barr, Margo, Nelson, Mark R., Reid, Christopher M., Murray, Anne M., Shah, Raj C., Wolfe, Rory, Atkins, Joshua R., Fitzsimmons, Chantel, Cairns, Heath M., Green, Melissa J., Carr, Vaughan J., Cowley, Mark J., Pickett, Hilda A., James, Paul A., Powell, Joseph E., Kaplan, Warren, Gibson, Greg, Gyllensten, Ulf, Cairns, Murray J., McNamara, Martin, Dinger, Marcel E., Thomas, David M.

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Somatic reversion of pathogenic DOCK8 variants alters lymphocyte differentiation and function to effectively cure DOCK8 deficiency von Pillay, Bethany A., Fusaro, Mathieu, Gray, Paul E., Statham, Aaron L., Burnett, Leslie, Bezrodnik, Liliana, Kane, Alisa, Tong, Winnie, Abdo, Chrystelle, Winter, Sarah, Chevalier, Samuel, Levy, Romain, Masson, Cecile, Schmitt, Yohann, Bole, Christine, Malphettes, Marion, Macintyre, Elizabeth, Villartay, Jean-Pierre De, Ziegler, John B., Smart, Joanne M., Peake, Jane, Aghamohammadi, Asghar, Hammarstrom, Lennart, Abolhassani, Hassan, Picard, Capucine, Fischer, Alain, Latour, Sylvain, Neven, Benedicte, Tangye, Stuart G., Ma, Cindy S.

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Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity von Clark, Susan J, Coolen, Marcel W, Stirzaker, Clare, Song, Jenny Z, Statham, Aaron L, Kassir, Zena, Moreno, Carlos S, Young, Andrew N, Varma, Vijay, Speed, Terence P, Cowley, Mark, Lacaze, Paul, Kaplan, Warren, Robinson, Mark D

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