SCRINSHOT enables spatial mapping of cell states in tissue sections with single-cell resolution von Sountoulidis, Alexandros, Liontos, Andreas, Nguyen, Hong Phuong, Firsova, Alexandra B, Fysikopoulos, Athanasios, Qian, Xiaoyan, Seeger, Werner, Sundström, Erik, Nilsson, Mats, Samakovlis, Christos

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High-parametric protein maps reveal the spatial organization in early-developing human lung von Sariyar, Sanem, Sountoulidis, Alexandros, Hansen, Jan Niklas, Marco Salas, Sergio, Mardamshina, Mariya, Martinez Casals, Anna, Ballllosera Navarro, Frederic, Andrusivova, Zaneta, Li, Xiaofei, Czarnewski, Paulo, Lundeberg, Joakim, Linnarsson, Sten, Nilsson, Mats, Sundström, Erik, Samakovlis, Christos, Lundberg, Emma, Ayoglu, Burcu

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Activation of the canonical bone morphogenetic protein (BMP) pathway during lung morphogenesis and adult lung tissue repair von Sountoulidis, Alexandros, Stavropoulos, Athanasios, Giaglis, Stavros, Apostolou, Eirini, Monteiro, Rui, Chuva de Sousa Lopes, Susana M, Chen, Huaiyong, Stripp, Barry R, Mummery, Christine, Andreakos, Evangelos, Sideras, Paschalis

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A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung von Sountoulidis, Alexandros, Marco Salas, Sergio, Braun, Emelie, Avenel, Christophe, Bergenstråhle, Joseph, Theelke, Jonas, Vicari, Marco, Czarnewski, Paulo, Liontos, Andreas, Abalo, Xesus, Andrusivová, Žaneta, Mirzazadeh, Reza, Asp, Michaela, Li, Xiaofei, Hu, Lijuan, Sariyar, Sanem, Martinez Casals, Anna, Ayoglu, Burcu, Firsova, Alexandra, Michaëlsson, Jakob, Lundberg, Emma, Wählby, Carolina, Sundström, Erik, Linnarsson, Sten, Lundeberg, Joakim, Nilsson, Mats, Samakovlis, Christos

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An essential function for autocrine hedgehog signaling in epithelial proliferation and differentiation in the trachea von Yin, Wenguang, Liontos, Andreas, Koepke, Janine, Ghoul, Maroua, Mazzocchi, Luciana, Liu, Xinyuan, Lu, Chunyan, Wu, Haoyu, Fysikopoulos, Athanasios, Sountoulidis, Alexandros, Seeger, Werner, Ruppert, Clemens, Günther, Andreas, Stainier, Didier Y R, Samakovlis, Christos

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Coordinated activation of TGF-β and BMP pathways promotes autophagy and limits liver injury after acetaminophen intoxication von Stavropoulos, Athanasios, Divolis, Georgios, Manioudaki, Maria, Gavriil, Ariana, Kloukina, Ismini, Perrea, Despina N., Sountoulidis, Alexandros, Ford, Ethan, Doulou, Athanasia, Apostolidou, Anastasia, Katsantoni, Elena, Ritvos, Olli, Germanidis, Georgios, Xilouri, Maria, Sideras, Paschalis

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Probe set selection for targeted spatial transcriptomics von Kuemmerle, Louis B., Luecken, Malte D., Firsova, Alexandra B., Barros de Andrade e Sousa, Lisa, Straßer, Lena, Mekki, Ilhem Isra, Campi, Francesco, Heumos, Lukas, Shulman, Maiia, Beliaeva, Valentina, Hediyeh-Zadeh, Soroor, Schaar, Anna C., Mahbubani, Krishnaa T., Sountoulidis, Alexandros, Balassa, Tamás, Kovacs, Ferenc, Horvath, Peter, Piraud, Marie, Ertürk, Ali, Samakovlis, Christos, Theis, Fabian J.

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The discovAIR project: a roadmap towards the Human Lung Cell Atlas von Luecken, Malte D, Zaragosi, Laure-Emmanuelle, Madissoon, Elo, Sikkema, Lisa, Firsova, Alexandra B, De Domenico, Elena, Kümmerle, Louis, Saglam, Adem, Berg, Marijn, Gay, Aurore C A, Schniering, Janine, Mayr, Christoph H, Abalo, Xesús M, Larsson, Ludvig, Sountoulidis, Alexandros, Teichmann, Sarah, van Eunen, Karen, Koppelman, Gerard H, Saeb-Parsy, Kourosh, Leroy, Sylvie, Powell, Pippa, Sarkans, Ugis, Timens, Wim, Lundeberg, Joakim, van den Berge, Maarten, Nilsson, Mats, Horváth, Peter, Denning, Jessica, Papatheodorou, Irene, Schultze, Joachim, Schiller, Herbert B, Barbry, Pascal, Petoukhov, Ilya, Misharin, Alexander V, Adcock, Ian, von Papen, Michael, Theis, Fabian J, Samakovlis, Christos, Meyer, Kerstin B, Nawijn, Martijn C

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Activin, neutrophils, and inflammation: just coincidence? von Sideras, Paschalis, Apostolou, Eirini, Stavropoulos, Athanasios, Sountoulidis, Alexandros, Gavriil, Arianna, Apostolidou, Anastasia, Andreakos, Evangelos

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Activin-A Overexpression in the Murine Lung Causes Pathology That Simulates Acute Respiratory Distress Syndrome von APOSTOLOU, Eirini, STAVROPOULOS, Athanasios, RITVOS, Olli, TZELEPIS, George E, ANDREAKOS, Evangelos, SIDERAS, Paschalis, SOUNTOULIDIS, Alexandros, XIRAKIA, Charoula, GIAGLIS, Stavros, PROTOPAPADAKIS, Evdokia, RITIS, Konstantinos, MENTZELOPOULOS, Spyros, PASTERNACK, Arja, FOSTER, Martyn

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Activation of the Canonical Bone Morphogenetic Protein von Sountoulidis, Alexandros, Stavropoulos, Athanasios, Giaglis, Stavros, Apostolou, Eirini, Monteiro, Rui, Chuva de Sousa Lopes, Susana M, Chen, Huaiyong, Stripp, Barry R, Mummery, Christine, Andreakos, Evangelos, Sideras, Paschalis

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Individual-donor scRNA-Seq datasets, as Seurat 4.0.5 objects von Sountoulidis, Alexandros, Samakovlis, Christos

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Probe set selection for targeted spatial transcriptomics von Kuemmerle, Louis B, Luecken, Malte D, Firsova, Alexandra B, Barros de Andrade E Sousa, Lisa, Straßer, Lena, Mekki, Ilhem Isra, Campi, Francesco, Heumos, Lukas, Shulman, Maiia, Beliaeva, Valentina, Hediyeh-Zadeh, Soroor, Schaar, Anna C, Mahbubani, Krishnaa T, Sountoulidis, Alexandros, Balassa, Tamás, Kovacs, Ferenc, Horvath, Peter, Piraud, Marie, Ertürk, Ali, Samakovlis, Christos, Theis, Fabian J

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Probe set selection for targeted spatial transcriptomics von Kuemmerle, Louis B, Luecken, Malte D, Firsova, Alexandra B, Andrade e Sousa, Lisa Barros de, Straßer, Lena, Mekki, Ilhem Isra, Campi, Francesco, Heumos, Lukas, Shulman, Maiia, Beliaeva, Valentina, Hediyeh-Zadeh, Soroor, Schaar, Anna C, Mahbubani, Krishnaa T, Sountoulidis, Alexandros, Balassa, Tamás, Kovacs, Ferenc, Horvath, Peter, Piraud, Marie, Ertürk, Ali, Samakovlis, Christos, Theis, Fabian J

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A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung von Sountoulidis, Alexandros, Marco Salas, Sergio, Braun, Emelie, Avenel, Christophe, Bergenstråhle, Joseph, Theelke, Jonas, Vicari, Marco, Czarnewski, Paulo, Liontos, Andreas, Abalo, Xesus, Andrusivová, Zaneta, Mirzazadeh, Reza, Asp, Michaela, Li, Xiaofei, Hu, Lijuan, Sariyar, Sanem, Martinez Casals, Anna, Ayoglu, Burcu, Firsova, Alexandra, Michaëlsson, Jakob, Lundberg, Emma, Wählby, Carolina, Sundström, Erik, Linnarsson, Sten, Lundeberg, Joakim, Nilsson, Mats, Samakovlis, Christos

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High-parametric protein maps reveal the spatial organization in early-developing human lung von Sariyar, Sanem, Sountoulidis, Alex, Hansen, Jan N., Marco Salas, Sergio, Mardamshina, Mariya, Martinez Casals, Ana, Ballllosera Navarro, Frederic, Andrusivova, Zaneta, Li, Xiaofei, Czarnewski, Paulo, Lundeberg, Joakim, Linnarsson, Sten, Nilsson, Mats, Sundström, Erik, Samakovlis, Christos, Käller Lundberg, Emma, Ayoglu, Burcu

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SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections (Revision data) von Sountoulidis, Alexandros, Liontos, Andreas, Nguyen, Hong Phuong, Firsova, Alexandra B., Fysikopoulos, Athanasios, Qian, Xiaoyan, Seeger, Werner, Sundström, Erik, Nilsson, Mats, Samakovlis, Christos

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SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections von Sountoulidis, Alexandros, Liontos, Andreas, Nguyen, Hong Phuong, Firsova, Alexandra B., Fysikopoulos, Athanasios, Qian, Xiaoyan, Seeger, Werner, Sundström, Erik, Nilsson, Mats, Samakovlis, Christos

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Activin neutralisers and uses thereof for treatment of diseases associated with aberrant "host defence response" activation von RITVOS, OLLI, APOSTOLOU, EIRINI, XIRAKIA, CHAROULA, SIDERAS, PASCHALIS, ANDREAKOS, EVANGELOS, STAVROPOULOS, ATHANASIOS, PROTOPAPADAKIS, EVDOKIA, SOUNTOULIDIS, ALEXANDROS, GIAGLIS, STAVROS

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ACTIVIN NEUTRALISERS AND USES THEREOF FOR TREATMENT OF DISEASES ASSOCIATED WITH ABERRANT "HOST DEFENCE RESPONSE" ACTIVATION von PROTOPAPADAKI, EVDOKIA NIKOLAOU, XIRAKIA, CHAROULA KONSTANTINOU, RITVOS, OLLI KARI, APOSTOLOU, EIRINI IRAKLI, SOUNTOULIDIS, ALEXANDROS PANAGIOTI, SIDERAS, PASCHALIS GEORGIOU, ANDREAKOS, EVANGELOS THEODOROU, GIAGLIS, STAVROS CHRISTOU, STAVROPOULOS, ATHANASIOS ARISTOFANI

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