Single-Cell Analysis of Growth in Budding Yeast and Bacteria Reveals a Common Size Regulation Strategy von Soifer, Ilya, Robert, Lydia, Amir, Ariel

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Principles of cellular resource allocation revealed by condition-dependent proteome profiling von Metzl-Raz, Eyal, Kafri, Moshe, Yaakov, Gilad, Soifer, Ilya, Gurvich, Yonat, Barkai, Naama

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Systematic identification of cell size regulators in budding yeast von Soifer, Ilya, Barkai, Naama

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Novel insights from a multiomics dissection of the Hayflick limit von Chan, Michelle, Yuan, Han, Soifer, Ilya, Maile, Tobias M, Wang, Rebecca Y, Ireland, Andrea, O'Brien, Jonathon J, Goudeau, Jérôme, Chan, Leanne J G, Vijay, Twaritha, Freund, Adam, Kenyon, Cynthia, Bennett, Bryson D, McAllister, Fiona E, Kelley, David R, Roy, Margaret, Cohen, Robert L, Levinson, Arthur D, Botstein, David, Hendrickson, David G

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A new experimental platform facilitates assessment of the transcriptional and chromatin landscapes of aging yeast von Hendrickson, David G, Soifer, Ilya, Wranik, Bernd J, Kim, Griffin, Robles, Michael, Gibney, Patrick A, McIsaac, R Scott

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High-resolution genetic mapping of maize pan-genome sequence anchors von Lu, Fei, Romay, Maria C., Glaubitz, Jeffrey C., Bradbury, Peter J., Elshire, Robert J., Wang, Tianyu, Li, Yu, Li, Yongxiang, Semagn, Kassa, Zhang, Xuecai, Hernandez, Alvaro G., Mikel, Mark A., Soifer, Ilya, Barad, Omer, Buckler, Edward S.

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A Visual Framework for Classifying Determinants of Cell Size von Jonas, Felix, Soifer, Ilya, Barkai, Naama

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MRC1-dependent scaling of the budding yeast DNA replication timing program von Koren, Amnon, Soifer, Ilya, Barkai, Naama

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Increasing population growth by asymmetric segregation of a limiting resource during cell division von Avraham, Nurit, Soifer, Ilya, Carmi, Miri, Barkai, Naama

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Heterosis as a consequence of regulatory incompatibility von Herbst, Rebecca H, Bar-Zvi, Dana, Reikhav, Sharon, Soifer, Ilya, Breker, Michal, Jona, Ghil, Shimoni, Eyal, Schuldiner, Maya, Levy, Avraham A, Barkai, Naama

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Modeling Multiplexed Images with Spatial-LDA Reveals Novel Tissue Microenvironments von Chen, Zhenghao, Soifer, Ilya, Hilton, Hugo, Keren, Leeat, Jojic, Vladimir

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Ndel1-derived peptides modulate bidirectional transport of injected beads in the squid giant axon von Segal, Michal, Soifer, Ilya, Petzold, Heike, Howard, Jonathon, Elbaum, Michael, Reiner, Orly

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Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize von Hirsch, Candice N., Hirsch, Cory D., Brohammer, Alex B., Bowman, Megan J., Soifer, Ilya, Barad, Omer, Shem-Tov, Doron, Baruch, Kobi, Lu, Fei, Hernandez, Alvaro G., Fields, Christopher J., Wright, Chris L., Koehler, Klaus, Springer, Nathan M., Buckler, Edward, Buell, C. Robin, de Leon, Natalia, Kaeppler, Shawn M., Childs, Kevin L., Mikel, Mark A.

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Unraveling the message: insights into comparative genomics of the naked mole-rat von Lewis, Kaitlyn N., Soifer, Ilya, Melamud, Eugene, Roy, Margaret, McIsaac, R. Scott, Hibbs, Matthew, Buffenstein, Rochelle

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MANF regulates metabolic and immune homeostasis in ageing and protects against liver damage von Sousa-Victor, Pedro, Neves, Joana, Cedron-Craft, Wendy, Ventura, P. Britten, Liao, Chen-Yu, Riley, Rebeccah R., Soifer, Ilya, van Bruggen, Nicholas, Kolumam, Ganesh A., Villeda, Saul A., Lamba, Deepak A., Jasper, Heinrich

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Loss of major nutrient sensing and signaling pathways suppresses starvation lethality in electron transport chain mutants von Lewis, Alisha G, Caldwell, Robert, Rogers, Jason V, Ingaramo, Maria, Wang, Rebecca Y, Soifer, Ilya, Hendrickson, David G, McIsaac, R Scott, Botstein, David, Gibney, Patrick A

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Simultaneous Profiling of DNA Accessibility and Gene Expression Dynamics with ATAC-Seq and RNA-Seq von Hendrickson, David G., Soifer, Ilya, Wranik, Bernd J., Botstein, David, Scott McIsaac, R.

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Abstract 3134: Calling somatic variants from UG100 data using deep learning von Levy, Maya, Shem-Tov, Doron, Benjamin, Hila, Benjamin, Sima, Soifer, Ilya, Gilad, Shlomit, Lebanony, Danit, Iremadze, Nika, Meiri, Eti, Lipson, Doron, Barad, Omer

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Abstract 213: Phylogenetic reconstruction across 303 metastatic tumor samples using Ultima whole-genome sequencing dramatically increases subclonal resolution von Hess, Julian, Martin, Elizabeth, Soifer, Ilya, Benjamin, Hila, Miller, Mendy, Cibulskis, Carrie, Danysh, Brian P., Coole, Matthew, Gabriel, Stacey, Juric, Dejan, Lipson, Doron, Getz, Gad

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Principles of Systems Biology, No. 21 von Cao, Junyue, Packer, Jonathan, Waterston, Robert, Trapnell, Cole, Shendure, Jay, Rajaram, Satwik, Wu, Lani F., Altschuler, Steven J., Liang, Jackson, O'Brien, Lucy Erin, Eizenberg-Magar, Inbal, Rimer, Jacob, Friedman, Nir, Metzl-Raz, Eyal, Kafri, Moshe, Yaakov, Gilad, Soifer, Ilya, Gurvich, Yonat, Barkai, Naama, Mardinoglu, Adil, Ponten, Fredrik, Uhlén, Mathias, Rahi, Sahand Jamal, Cross, Frederick R., Baumgart, Meike, Noack, Stephan

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