The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses von Picton, David M, Luyten, Yvette A, Morgan, Richard D, Nelson, Andrew, Smith, Darren L, Dryden, David T F, Hinton, Jay C D, Blower, Tim R

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Built environment microbiomes transition from outdoor to human-associated communities after construction and commissioning von Young, Gregory R., Sherry, Angela, Smith, Darren L.

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Profiling the Enterobacterales Community Isolated from Retail Foods in England von Harding-Crooks, Richard, Jones, Amanda L., Smith, Darren L., Fanning, Séamus, Fox, Edward M.

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The effect of the timing of exposure to Campylobacter jejuni on the gut microbiome and inflammatory responses of broiler chickens von Connerton, Phillippa L, Richards, Philip J, Lafontaine, Geraldine M, O'Kane, Peter M, Ghaffar, Nacheervan, Cummings, Nicola J, Smith, Darren L, Fish, Neville M, Connerton, Ian F

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Structure and rational engineering of the PglX methyltransferase and specificity factor for BREX phage defence von Went, Sam C., Picton, David M., Morgan, Richard D., Nelson, Andrew, Brady, Aisling, Mariano, Giuseppina, Dryden, David T. F., Smith, Darren L., Wenner, Nicolas, Hinton, Jay C. D., Blower, Tim R.

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The core phageome and its interrelationship with preterm human milk lipids von Yew, Wen C., Young, Gregory R., Nelson, Andrew, Cheung, William, Stewart, Christopher J., Bridge, Simon H., Granger, Claire, Berrington, Janet E., Embleton, Nicholas D., Smith, Darren L.

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The Recovery and Concentration of Spodumene Using Dense Media Separation von Gibson, Charlotte E., Aghamirian, Massoud, Grammatikopoulos, Tassos, Smith, Darren L., Bottomer, Lindsay

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The role of viral genomics in understanding COVID-19 outbreaks in long-term care facilities von Aggarwal, Dinesh, Myers, Richard, Hamilton, William L, Bharucha, Tehmina, Tumelty, Niamh M, Brown, Colin S, Meader, Emma J, Connor, Tom, Smith, Darren L, Bradley, Declan T, Robson, Samuel, Bashton, Matthew, Shallcross, Laura, Zambon, Maria, Goodfellow, Ian, Chand, Meera, O'Grady, Justin, Török, M Estée, Peacock, Sharon J, Page, Andrew J

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Raltegravir Is a Substrate for SLC22A6: a Putative Mechanism for the Interaction between Raltegravir and Tenofovir von Moss, Darren M, Kwan, Wai San, Liptrott, Neill J, Smith, Darren L, Siccardi, Marco, Khoo, Saye H, Back, David J, Owen, Andrew

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Comparative genomics of Shiga toxin encoding bacteriophages von Smith, Darren L, Rooks, David J, Fogg, Paul C M, Darby, Alistair C, Thomson, Nick R, McCarthy, Alan J, Allison, Heather E

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The temperate Burkholderia phage AP3 of the Peduovirinae shows efficient antimicrobial activity against B. cenocepacia of the IIIA lineage von Roszniowski, Bartosz, Latka, Agnieszka, Maciejewska, Barbara, Vandenheuvel, Dieter, Olszak, Tomasz, Briers, Yves, Holt, Giles S., Valvano, Miguel A., Lavigne, Rob, Smith, Darren L., Drulis-Kawa, Zuzanna

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Gut Microbial Stability is Associated with Greater Endurance Performance in Athletes Undertaking Dietary Periodization von Furber, Matthew J W, Young, Gregory R, Holt, Giles S, Pyle, Simone, Davison, Glen, Roberts, Michael G, Roberts, Justin D, Howatson, Glyn, Smith, Darren L

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Reducing Viability Bias in Analysis of Gut Microbiota in Preterm Infants at Risk of NEC and Sepsis von Young, Gregory R, Smith, Darren L, Embleton, Nicholas D, Berrington, Janet E, Schwalbe, Edward C, Cummings, Stephen P, van der Gast, Christopher J, Lanyon, Clare

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Optimisation and Application of a Novel Method to Identify Bacteriophages in Maternal Milk and Infant Stool Identifies Host-Phage Communities Within Preterm Infant Gut von Young, Gregory R, Yew, Wen C, Nelson, Andrew, Bridge, Simon H, Berrington, Janet E, Embleton, Nicholas D, Smith, Darren L

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Bacteriophage communities are a reservoir of unexplored microbial diversity in neonatal health and disease von Young, Gregory R, Nelson, Andrew, Stewart, Christopher J, Smith, Darren L

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Temperate Bacteriophages from Chronic Pseudomonas aeruginosa Lung Infections Show Disease-Specific Changes in Host Range and Modulate Antimicrobial Susceptibility von Tariq, Mohammad A, Everest, Francesca L C, Cowley, Lauren A, Wright, Rosanna, Holt, Giles S, Ingram, Hazel, Duignan, Liberty A M, Nelson, Andrew, Lanyon, Clare V, Perry, Audrey, Perry, John D, Bourke, Stephen, Brockhurst, Michael A, Bridge, Simon H, De Soyza, Anthony, Smith, Darren L

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Response: Commentary: Reducing Viability Bias in Analysis of Gut Microbiota in Preterm Infants at Risk of NEC and Sepsis von Young, Gregory R, Smith, Darren L, Embleton, Nicholas D, Berrington, Janet Elizabeth, Schwalbe, Edward C, Cummings, Stephen Paul, van der Gast, Christopher J, Lanyon, Clare

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Prevalence of persistent SARS-CoV-2 in a large community surveillance study von Ghafari, Mahan, Hall, Matthew, Golubchik, Tanya, Ayoubkhani, Daniel, House, Thomas, MacIntyre-Cockett, George, Fryer, Helen R., Thomson, Laura, Nurtay, Anel, Kemp, Steven A., Ferretti, Luca, Buck, David, Green, Angie, Trebes, Amy, Piazza, Paolo, Lonie, Lorne J., Studley, Ruth, Rourke, Emma, Smith, Darren L., Bashton, Matthew, Nelson, Andrew, Crown, Matthew, McCann, Clare, Young, Gregory R., Santos, Rui Andre Nunes dos, Richards, Zack, Tariq, Mohammad Adnan, Cahuantzi, Roberto, Barrett, Jeff, Fraser, Christophe, Bonsall, David, Walker, Ann Sarah, Lythgoe, Katrina

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Short-Tailed Stx Phages Exploit the Conserved YaeT Protein To Disseminate Shiga Toxin Genes among Enterobacteria von SMITH, Darren L, JAMES, Chloë E, SERGEANT, Martin J, YAN YAXIAN, SAUNDERS, Jon R, MCCARTHY, Alan J, ALLISON, Heather E

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High-Throughput Method for Rapid Induction of Prophages from Lysogens and Its Application in the Study of Shiga Toxin-Encoding Escherichia coli Strains von McDonald, James E, Smith, Darren L, Fogg, Paul C.M, McCarthy, Alan J, Allison, Heather E

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