iFeature: a Python package and web server for features extraction and selection from protein and peptide sequences von Chen, Zhen, Zhao, Pei, Li, Fuyi, Leier, André, Marquez-Lago, Tatiana T, Wang, Yanan, Webb, Geoffrey I, Smith, A Ian, Daly, Roger J, Chou, Kuo-Chen, Song, Jiangning

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A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction von Mei, Shutao, Li, Fuyi, Leier, André, Marquez-Lago, Tatiana T, Giam, Kailin, Croft, Nathan P, Akutsu, Tatsuya, Smith, A Ian, Li, Jian, Rossjohn, Jamie, Purcell, Anthony W, Song, Jiangning

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Live fast, die young: Accelerated growth, mortality, and turnover in street trees von Smith, Ian A, Dearborn, Victoria K, Hutyra, Lucy R

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iLearn: an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data von Chen, Zhen, Zhao, Pei, Li, Fuyi, Marquez-Lago, Tatiana T, Leier, André, Revote, Jerico, Zhu, Yan, Powell, David R, Akutsu, Tatsuya, Webb, Geoffrey I, Chou, Kuo-Chen, Smith, A Ian, Daly, Roger J, Li, Jian, Song, Jiangning

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DeepCleave: a deep learning predictor for caspase and matrix metalloprotease substrates and cleavage sites von Li, Fuyi, Chen, Jinxiang, Leier, André, Marquez-Lago, Tatiana, Liu, Quanzhong, Wang, Yanze, Revote, Jerico, Smith, A Ian, Akutsu, Tatsuya, Webb, Geoffrey I, Kurgan, Lukasz, Song, Jiangning

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Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites in the human proteome von Li, Fuyi, Li, Chen, Marquez-Lago, Tatiana T, Leier, André, Akutsu, Tatsuya, Purcell, Anthony W, Ian Smith, A, Lithgow, Trevor, Daly, Roger J, Song, Jiangning, Chou, Kuo-Chen

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Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods von Li, Fuyi, Wang, Yanan, Li, Chen, Marquez-Lago, Tatiana T, Leier, André, Rawlings, Neil D, Haffari, Gholamreza, Revote, Jerico, Akutsu, Tatsuya, Chou, Kuo-Chen, Purcell, Anthony W, Pike, Robert N, Webb, Geoffrey I, Ian Smith, A, Lithgow, Trevor, Daly, Roger J, Whisstock, James C, Song, Jiangning

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PeNGaRoo, a combined gradient boosting and ensemble learning framework for predicting non-classical secreted proteins von Zhang, Yanju, Yu, Sha, Xie, Ruopeng, Li, Jiahui, Leier, André, Marquez-Lago, Tatiana T, Akutsu, Tatsuya, Smith, A Ian, Ge, Zongyuan, Wang, Jiawei, Lithgow, Trevor, Song, Jiangning

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The Intrinsic Value of Endangered Species von Smith, Ian A.

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Urbanization and fragmentation mediate temperate forest carbon cycle response to climate von Reinmann, Andrew B, Smith, Ian A, Thompson, Jonathan R, Hutyra, Lucy R

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Piecing together the fragments: elucidating edge effects on forest carbon dynamics von Smith, Ian A, Hutyra, Lucy R, Reinmann, Andrew B, Marrs, Julia K, Thompson, Jonathan R

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Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information von Li, Fuyi, Leier, Andre, Liu, Quanzhong, Wang, Yanan, Xiang, Dongxu, Akutsu, Tatsuya, Webb, Geoffrey I., Smith, A. Ian, Marquez-Lago, Tatiana, Li, Jian, Song, Jiangning

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The X-ray Crystal Structure of Full-Length Human Plasminogen von Law, Ruby H.P., Caradoc-Davies, Tom, Cowieson, Nathan, Horvath, Anita J., Quek, Adam J., Encarnacao, Joanna Amarante, Steer, David, Cowan, Angus, Zhang, Qingwei, Lu, Bernadine G.C., Pike, Robert N., Smith, A. Ian, Coughlin, Paul B., Whisstock, James C.

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A Deep Learning-Based Method for Identification of Bacteriophage-Host Interaction von Li, Menglu, Wang, Yanan, Li, Fuyi, Zhao, Yun, Liu, Mengya, Zhang, Sijia, Bin, Yannan, Smith, A. Ian, Webb, Geoffrey I., Li, Jian, Song, Jiangning, Xia, Junfeng

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Common Fold Mediates Vertebrate Defense and Bacterial Attack von Rosado, Carlos J, Buckle, Ashley M, Law, Ruby H.P, Butcher, Rebecca E, Kan, Wan-Ting, Bird, Catherina H, Ung, Kheng, Browne, Kylie A, Baran, Katherine, Bashtannyk-Puhalovich, Tanya A, Faux, Noel G, Wong, Wilson, Porter, Corrine J, Pike, Robert N, Ellisdon, Andrew M, Pearce, Mary C, Bottomley, Stephen P, Emsley, Jonas, Smith, A. Ian, Rossjohn, Jamie, Hartland, Elizabeth L, Voskoboinik, Ilia, Trapani, Joseph A, Bird, Phillip I, Dunstone, Michelle A, Whisstock, James C

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Upregulation of hepatic angiotensin-converting enzyme 2 (ACE2) and angiotensin-(1–7) levels in experimental biliary fibrosis von Herath, Chandana B, Warner, Fiona J, Lubel, John S, Dean, Rachael G, Jia, Zhiyuan, Lew, Rebecca A, Smith, A. Ian, Burrell, Louise M, Angus, Peter W

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The Clinical and Economic Costs of Delirium After Surgical Resection for Esophageal Malignancy von Markar, Sheraz R, Smith, Ian A, Karthikesalingam, Alan, Low, Donald E

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Letter by Rajapakse et al Regarding Article, “Combined Angiotensin Receptor Antagonism and Neprilysin Inhibition” von Rajapakse, Niwanthi W, Kuruppu, Sanjaya, Ian Smith, A

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The subtilisin-like protease AprV2 is required for virulence and uses a novel disulphide-tethered exosite to bind substrates von Kennan, Ruth M, Wong, Wilson, Dhungyel, Om P, Han, Xiaoyan, Wong, David, Parker, Dane, Rosado, Carlos J, Law, Ruby H P, McGowan, Sheena, Reeve, Shane B, Levina, Vita, Powers, Glenn A, Pike, Robert N, Bottomley, Stephen P, Smith, A Ian, Marsh, Ian, Whittington, Richard J, Whisstock, James C, Porter, Corrine J, Rood, Julian I

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GABA production by glutamic acid decarboxylase is regulated by a dynamic catalytic loop von Pike, Robert N, Rosado, Carlos J, Fenalti, Gustavo, Mahmood, Khalid, El-Kabbani, Ossama, Wilce, Matthew, Tuck, Kellie, Rossjohn, Jamie, Mackay, Ian R, Whisstock, James C, Schmidberger, Jason, Rowley, Merrill J, Banga, J Paul, Faux, Noel G, Smith, A Ian, Hampe, Christiane S, Langendorf, Christopher, Law, Ruby H P, Buckle, Ashley M

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