Gene expression profiling of single cells from archival tissue with laser-capture microdissection and Smart-3SEQ von Foley, Joseph W, Zhu, Chunfang, Jolivet, Philippe, Zhu, Shirley X, Lu, Peipei, Meaney, Michael J, West, Robert B

Volltext

Clinically Relevant Molecular Subtypes in Leiomyosarcoma von Guo, Xiangqian, Jo, Vickie Y, Mills, Anne M, Zhu, Shirley X, Lee, Cheng-Han, Espinosa, Inigo, Nucci, Marisa R, Varma, Sushama, Forgó, Erna, Hastie, Trevor, Anderson, Sharon, Ganjoo, Kristen, Beck, Andrew H, West, Robert B, Fletcher, Christopher D, van de Rijn, Matt

Volltext

Carbon source utilization and inhibitor tolerance of 45 oleaginous yeast species von Sitepu, Irnayuli, Selby, Tylan, Lin, Ting, Zhu, Shirley, Boundy-Mills, Kyria

Volltext

MicroRNA profiling of BRCA1/2 mutation-carrying and non-mutation-carrying high-grade serous carcinomas of ovary von Lee, Cheng-Han, Subramanian, Subbaya, Beck, Andrew H, Espinosa, Inigo, Senz, Janine, Zhu, Shirley X, Huntsman, David, van de Rijn, Matt, Gilks, C Blake

Volltext

Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ: Analysis of TBCRC 038 and RAHBT cohorts von Strand, Siri H., Rivero-Gutiérrez, Belén, Houlahan, Kathleen E., Seoane, Jose A., King, Lorraine M., Risom, Tyler, Simpson, Lunden A., Vennam, Sujay, Khan, Aziz, Cisneros, Luis, Hardman, Timothy, Harmon, Bryan, Couch, Fergus, Gallagher, Kristalyn, Kilgore, Mark, Wei, Shi, DeMichele, Angela, King, Tari, McAuliffe, Priscilla F., Nangia, Julie, Lee, Joanna, Tseng, Jennifer, Storniolo, Anna Maria, Thompson, Alastair M., Gupta, Gaorav P., Burns, Robyn, Veis, Deborah J., DeSchryver, Katherine, Zhu, Chunfang, Matusiak, Magdalena, Wang, Jason, Zhu, Shirley X., Tappenden, Jen, Ding, Daisy Yi, Zhang, Dadong, Luo, Jingqin, Jiang, Shu, Varma, Sushama, Anderson, Lauren, Straub, Cody, Srivastava, Sucheta, Curtis, Christina, Tibshirani, Rob, Angelo, Robert Michael, Hall, Allison, Owzar, Kouros, Polyak, Kornelia, Maley, Carlo, Marks, Jeffrey R., Colditz, Graham A., Hwang, E. Shelley, West, Robert B.

Volltext

Genome evolution during progression to breast cancer von Newburger, Daniel E, Kashef-Haghighi, Dorna, Weng, Ziming, Salari, Raheleh, Sweeney, Robert T, Brunner, Alayne L, Zhu, Shirley X, Guo, Xiangqian, Varma, Sushama, Troxell, Megan L, West, Robert B, Batzoglou, Serafim, Sidow, Arend

Volltext

Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers von Brunner, Alayne L, Beck, Andrew H, Edris, Badreddin, Sweeney, Robert T, Zhu, Shirley X, Li, Rui, Montgomery, Kelli, Varma, Sushama, Gilks, Thea, Guo, Xiangqian, Foley, Joseph W, Witten, Daniela M, Giacomini, Craig P, Flynn, Ryan A, Pollack, Jonathan R, Tibshirani, Robert, Chang, Howard Y, van de Rijn, Matt, West, Robert B

Volltext

A multiplexed in vivo approach to identify driver genes in small cell lung cancer von Lee, Myung Chang, Cai, Hongchen, Murray, Christopher W., Li, Chuan, Shue, Yan Ting, Andrejka, Laura, He, Andy L., Holzem, Alessandra M.E., Drainas, Alexandros P., Ko, Julie H., Coles, Garry L., Kong, Christina, Zhu, Shirley, Zhu, ChunFang, Wang, Jason, van de Rijn, Matt, Petrov, Dmitri A., Winslow, Monte M., Sage, Julien

Volltext

Transcriptome and genome evolution during HER2-amplified breast neoplasia von Lu, Peipei, Foley, Joseph, Zhu, Chunfang, McNamara, Katherine, Sirinukunwattana, Korsuk, Vennam, Sujay, Varma, Sushama, Fehri, Hamid, Srivastava, Arunima, Zhu, Shirley, Rittscher, Jens, Mallick, Parag, Curtis, Christina, West, Robert

Volltext

Combination Approach for Detecting Different Types of Alterations in Circulating Tumor DNA in Leiomyosarcoma von Przybyl, Joanna, Chabon, Jacob J, Spans, Lien, Ganjoo, Kristen N, Vennam, Sujay, Newman, Aaron M, Forgó, Erna, Varma, Sushama, Zhu, Shirley, Debiec-Rychter, Maria, Alizadeh, Ash A, Diehn, Maximilian, van de Rijn, Matt

Volltext

Placental S100 (S100p) and GATA3 : Markers for transitional epithelium and urothelial carcinoma discovered by complementary DNA microarray von HIGGINS, John P. T, KAYGUSUZ, Gulsah, LINGLI WANG, MONTGOMERY, Kelli, MASON, Veronica, ZHU, Shirley X, MARINELLI, Robert J, PRESTI, Joseph C, VAN DE RIJN, Matt, BROOKS, James D

Volltext

Tyrosine Kinase Inhibitors Reverse Type 1 Diabetes in Nonobese Diabetic Mice von Louvet, Cédric, Szot, Gregory L., Lang, Jiena, Lee, Michael R., Martinier, Nicolas, Bollag, Gideon, Zhu, Shirley, Weiss, Arthur, Bluestone, Jeffrey A.

Volltext

A shared transcriptional program in early breast neoplasias despite genetic and clinical distinctions von Brunner, Alayne L, Li, Jun, Guo, Xiangqian, Sweeney, Robert T, Varma, Sushama, Zhu, Shirley X, Li, Rui, Tibshirani, Robert, West, Robert B

Volltext

Cost-effective DNA methylation profiling by FML-seq von Foley, Joseph W, Zhu, Shirley X, West, Robert B

Volltext

Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ: Analysis of TBCRC 038 and RAHBT cohorts von Strand, Siri H., Rivero-Gutiérrez, Belén, Houlahan, Kathleen E., Seoane, Jose A., King, Lorraine M., Risom, Tyler, Simpson, Lunden A., Vennam, Sujay, Khan, Aziz, Cisneros, Luis, Hardman, Timothy, Harmon, Bryan, Couch, Fergus, Gallagher, Kristalyn, Kilgore, Mark, We, Shi, DeMichele, Angela, King, Tari, McAuliffe, Priscilla F., Nangia, Julie, Lee, Joanna, Tseng, Jennifer, Storniolo, Anna Maria, Thompson, Alastair M., Gupta, Gaorav P., Burns, Robyn, Veis, Deborah J., DeSchryver, Katherine, Zhu, Chunfang, Matusiak, Magdalena, Wang, Jason, Zhu, Shirley X., Tappenden, Jen, Ding, Daisy Yi, Zhang, Dadong, Luo, Jingqin, Jiang, Shu, Varma, Sushama, Anderson, Lauren, Straub, Cody, Srivastava, Sucheta, Curtis, Christina, Tibshirani, Rob, Angelo, Robert Michael, Hall, Allison, Owzar, Kouros, Polyak, Kornelia, Maley, Carlo, Marks, Jeffrey R., Colditz, Graham A., Hwang, E. Shelley, West, Robert B.

Volltext

The Macrophage Colony-Stimulating Factor 1 Response Signature in Breast Carcinoma von BECK, Andrevv H, ESPINOSA, Inigo, EDRIS, Badreddin, RUI LI, MONTGOMERY, Kelli, SHIRLEY ZHU, VARMA, Sushama, MARINELLI, Robert J, VAN DE RIJN, Matt, WEST, Robert B

Volltext

Cytokine priming enhances the antifibrotic effects of human adipose derived mesenchymal stromal cells conditioned medium von Brizio, Marianela, Mancini, Mathieu, Lora, Maximilien, Joy, Sydney, Zhu, Shirley, Brilland, Benoit, Reinhardt, Dieter P, Farge, Dominique, Langlais, David, Colmegna, Inés

Volltext

A Landscape Effect in Tenosynovial Giant-Cell Tumor from Activation of CSF1 Expression by a Translocation in a Minority of Tumor Cells von West, Robert B., Rubin, Brian P., Miller, Melinda A., Subramanian, Subbaya, Kaygusuz, Gulsah, Montgomery, Kelli, Zhu, Shirley, Marinelli, Robert J., De Luca, Alessandro, Downs-Kelly, Erinn, Goldblum, John R., Corless, Christopher L., Brown, Patrick O., Gilks, C. Blake, Nielsen, Torsten O., Huntsman, David, van de Rijn, Matt

Volltext

Human antigen-specific regulatory T cells generated by T cell receptor gene transfer von Brusko, Todd M, Koya, Richard C, Zhu, Shirley, Lee, Michael R, Putnam, Amy L, McClymont, Stephanie A, Nishimura, Michael I, Han, Shuhong, Chang, Lung-Ji, Atkinson, Mark A, Ribas, Antoni, Bluestone, Jeffrey A

Volltext

Molecular portraits of human breast tumours von Botstein, David, Perou, Charles M, Sørlie, Therese, Eisen, Michael B, van de Rijn, Matt, Jeffrey, Stefanie S, Rees, Christian A, Pollack, Jonathan R, Ross, Douglas T, Johnsen, Hilde, Akslen, Lars A, Fluge, Øystein, Pergamenschikov, Alexander, Williams, Cheryl, Zhu, Shirley X, Lønning, Per E, Børresen-Dale, Anne-Lise, Brown, Patrick O

Volltext