SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network von Hu, Jian, Li, Xiangjie, Coleman, Kyle, Schroeder, Amelia, Ma, Nan, Irwin, David J., Lee, Edward B., Shinohara, Russell T., Li, Mingyao

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Interpreting support vector machine models for multivariate group wise analysis in neuroimaging von Gaonkar, Bilwaj, T. Shinohara, Russell, Davatzikos, Christos

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Harmonization of cortical thickness measurements across scanners and sites von Fortin, Jean-Philippe, Cullen, Nicholas, Sheline, Yvette I., Taylor, Warren D., Aselcioglu, Irem, Cook, Philip A., Adams, Phil, Cooper, Crystal, Fava, Maurizio, McGrath, Patrick J., McInnis, Melvin, Phillips, Mary L., Trivedi, Madhukar H., Weissman, Myrna M., Shinohara, Russell T.

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Statistical harmonization corrects site effects in functional connectivity measurements from multi‐site fMRI data von Yu, Meichen, Linn, Kristin A., Cook, Philip A., Phillips, Mary L., McInnis, Melvin, Fava, Maurizio, Trivedi, Madhukar H., Weissman, Myrna M., Shinohara, Russell T., Sheline, Yvette I.

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Harmonization of multi-site diffusion tensor imaging data von Fortin, Jean-Philippe, Parker, Drew, Tunç, Birkan, Watanabe, Takanori, Elliott, Mark A., Ruparel, Kosha, Roalf, David R., Satterthwaite, Theodore D., Gur, Ruben C., Gur, Raquel E., Schultz, Robert T., Verma, Ragini, Shinohara, Russell T.

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Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity von Ciric, Rastko, Wolf, Daniel H., Power, Jonathan D., Roalf, David R., Baum, Graham L., Ruparel, Kosha, Shinohara, Russell T., Elliott, Mark A., Eickhoff, Simon B., Davatzikos, Christos, Gur, Ruben C., Gur, Raquel E., Bassett, Danielle S., Satterthwaite, Theodore D.

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Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data von Beer, Joanne C., Tustison, Nicholas J., Cook, Philip A., Davatzikos, Christos, Sheline, Yvette I., Shinohara, Russell T., Linn, Kristin A.

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Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization von Hu, Fengling, Chen, Andrew A., Horng, Hannah, Bashyam, Vishnu, Davatzikos, Christos, Alexander-Bloch, Aaron, Li, Mingyao, Shou, Haochang, Satterthwaite, Theodore D., Yu, Meichen, Shinohara, Russell T.

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Large-scale Radiomic Profiling of Recurrent Glioblastoma Identifies an Imaging Predictor for Stratifying Anti-Angiogenic Treatment Response von Kickingereder, Philipp, Götz, Michael, Muschelli, John, Wick, Antje, Neuberger, Ulf, Shinohara, Russell T, Sill, Martin, Nowosielski, Martha, Schlemmer, Heinz-Peter, Radbruch, Alexander, Wick, Wolfgang, Bendszus, Martin, Maier-Hein, Klaus H, Bonekamp, David

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Linked dimensions of psychopathology and connectivity in functional brain networks von Xia, Cedric Huchuan, Ma, Zongming, Ciric, Rastko, Gu, Shi, Betzel, Richard F., Kaczkurkin, Antonia N., Calkins, Monica E., Cook, Philip A., García de la Garza, Angel, Vandekar, Simon N., Cui, Zaixu, Moore, Tyler M., Roalf, David R., Ruparel, Kosha, Wolf, Daniel H., Davatzikos, Christos, Gur, Ruben C., Gur, Raquel E., Shinohara, Russell T., Bassett, Danielle S., Satterthwaite, Theodore D.

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Two distinct neuroanatomical subtypes of schizophrenia revealed using machine learning von Chand, Ganesh B, Dwyer, Dominic B, Erus, Guray, Sotiras, Aristeidis, Varol, Erdem, Srinivasan, Dhivya, Doshi, Jimit, Pomponio, Raymond, Pigoni, Alessandro, Dazzan, Paola, Kahn, Rene S, Schnack, Hugo G, Zanetti, Marcus V, Meisenzahl, Eva, Busatto, Geraldo F, Crespo-Facorro, Benedicto, Pantelis, Christos, Wood, Stephen J, Zhuo, Chuanjun, Shinohara, Russell T, Shou, Haochang, Fan, Yong, Gur, Ruben C, Gur, Raquel E, Satterthwaite, Theodore D, Koutsouleris, Nikolaos, Wolf, Daniel H, Davatzikos, Christos

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Multidimensional brain-age prediction reveals altered brain developmental trajectory in psychiatric disorders von Niu, Xin, Taylor, Alexei, Shinohara, Russell T, Kounios, John, Zhang, Fengqing

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Modular Segregation of Structural Brain Networks Supports the Development of Executive Function in Youth von Baum, Graham L., Ciric, Rastko, Roalf, David R., Betzel, Richard F., Moore, Tyler M., Shinohara, Russell T., Kahn, Ari E., Vandekar, Simon N., Rupert, Petra E., Quarmley, Megan, Cook, Philip A., Elliott, Mark A., Ruparel, Kosha, Gur, Raquel E., Gur, Ruben C., Bassett, Danielle S., Satterthwaite, Theodore D.

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Generalized ComBat harmonization methods for radiomic features with multi-modal distributions and multiple batch effects von Horng, Hannah, Singh, Apurva, Yousefi, Bardia, Cohen, Eric A., Haghighi, Babak, Katz, Sharyn, Noël, Peter B., Shinohara, Russell T., Kontos, Despina

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Childhood trauma history is linked to abnormal brain connectivity in major depression von Yu, Meichen, Linn, Kristin A., Shinohara, Russell T., Oathes, Desmond J., Cook, Philip A., Duprat, Romain, Moore, Tyler M., Oquendo, Maria A., Phillips, Mary L., McInnis, Melvin, Fava, Maurizio, Trivedi, Madhukar H., McGrath, Patrick, Parsey, Ramin, Weissman, Myrna M., Sheline, Yvette I.

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Spatial distribution of interictal spikes fluctuates over time and localizes seizure onset von Conrad, Erin C, Tomlinson, Samuel B, Wong, Jeremy N, Oechsel, Kelly F, Shinohara, Russell T, Litt, Brian, Davis, Kathryn A, Marsh, Eric D

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Normative brain size variation and brain shape diversity in humans von Reardon, P K, Seidlitz, Jakob, Vandekar, Simon, Liu, Siyuan, Patel, Raihaan, Park, Min Tae M, Alexander-Bloch, Aaron, Clasen, Liv S, Blumenthal, Jonathan D, Lalonde, Francois M, Giedd, Jay N, Gur, Ruben C, Gur, Raquel E, Lerch, Jason P, Chakravarty, M Mallar, Satterthwaite, Theodore D, Shinohara, Russell T, Raznahan, Armin

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Treatment pathway of bone sarcoma in children, adolescents, and young adults von Reed, Damon R., Hayashi, Masanori, Wagner, Lars, Binitie, Odion, Steppan, Diana A., Brohl, Andrew S., Shinohara, Eric T., Bridge, Julia A., Loeb, David M., Borinstein, Scott C., Isakoff, Michael S.

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Removing inter-subject technical variability in magnetic resonance imaging studies von Fortin, Jean-Philippe, Sweeney, Elizabeth M., Muschelli, John, Crainiceanu, Ciprian M., Shinohara, Russell T.

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Privacy-preserving harmonization via distributed ComBat von Chen, Andrew A., Luo, Chongliang, Chen, Yong, Shinohara, Russell T., Shou, Haochang

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