A trichostatin A expression signature identified by TempO-Seq targeted whole transcriptome profiling von Yeakley, Joanne M, Shepard, Peter J, Goyena, Diana E, VanSteenhouse, Harper C, McComb, Joel D, Seligmann, Bruce E

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Extraction-free whole transcriptome gene expression analysis of FFPE sections and histology-directed subareas of tissue von Trejo, Christy L, Babić, Miloš, Imler, Elliot, Gonzalez, Migdalia, Bibikov, Sergei I, Shepard, Peter J, VanSteenhouse, Harper C, Yeakley, Joanne M, Seligmann, Bruce E

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High-throughput gene expression analysis with TempO-LINC sensitively resolves complex brain, lung and kidney heterogeneity at single-cell resolution von Eastburn, Dennis J., White, Kevin S., Jayne, Nathan D., Camiolo, Salvatore, Montis, Gioele, Ha, Seungeun, Watson, Kendall G., Yeakley, Joanne M., McComb, Joel, Seligmann, Bruce

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classifieR a flexible interactive cloud-application for functional annotation of cancer transcriptomes von Quinn, Gerard P, Sessler, Tamas, Ahmaderaghi, Baharak, Lambe, Shauna, VanSteenhouse, Harper, Lawler, Mark, Wappett, Mark, Seligmann, Bruce, Longley, Daniel B, McDade, Simon S

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Characterization of carfilzomib-resistant non-small cell lung cancer cell lines von Hanke, Neale T., Imler, Elliot, Marron, Marilyn T., Seligmann, Bruce E., Garland, Linda L., Baker, Amanda F.

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Integrin β4 Regulates SPARC Protein to Promote Invasion von Gerson, Kristin D., Shearstone, Jeffrey R., Maddula, V.S.R. Krishna, Seligmann, Bruce E., Mercurio, Arthur M.

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Transcriptional analysis of intracytoplasmically stained, FACS-purified cells by high-throughput, quantitative nuclease protection von Pechhold, Susanne, Stouffer, Melissa, Walker, Gregory, Martel, Ralph, Seligmann, Bruce, Hang, Yan, Stein, Roland, Harlan, David M, Pechhold, Klaus

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Quantitative nuclease protection assay in paraffin-embedded tissue replicates prognostic microarray gene expression in diffuse large-B-cell lymphoma von Roberts, Robin A, Sabalos, Constantine M, LeBlanc, Michael L, Martel, Ralph R, Frutiger, Yvette M, Unger, Joseph M, Botros, Ihab W, Rounseville, Matthew P, Seligmann, Bruce E, Miller, Thomas P, Grogan, Thomas M, Rimsza, Lisa M

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Abstract 125: Digital Spatial Molecular Profiling evidence from H&E stained FFPE that the tumor microenvironment confers gene expression phenotype specificity von Imler, Elliot, Nagle, Raymond, Seligmann, Bruce

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A Novel, Probe-Based and Instrument-Free Method for Improved Ultrahigh-Throughput Single-Cell Gene Expression Analysis of Peripheral Blood Mononuclear Cells von Eastburn, Dennis, White, Kevin, Camiolo, Salvatore, Montis, Gioele, Martin, Nicole, Seligmann, Bruce

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Effects of β4 integrin expression on microRNA patterns in breast cancer von Gerson, Kristin D, Maddula, V S R Krishna, Seligmann, Bruce E, Shearstone, Jeffrey R, Khan, Ashraf, Mercurio, Arthur M

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Diagnosis of Disease Using Whole Blood from a Fingerstick Spotted on Filter Paper: Gene Expression Signature Test for Alzheimer's and Parkinson's Diseases von Seligmann, Bruce, Camiolo, Salvatore, Scully, Kathleen, Hernandez, Monica, Babic, Milos, Yeakley, Joanne, Eastburn, Dennis, McComb, Joel, Sahagian, Gregory

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Abstract LB-097: Whole transcriptome dose response profiling enables characterization of efficacy, metabolism, side effects and cytotoxicity in a single comprehensive assay von Raghunathan, Megha, Imler, Elliot, Trejo, Christy, Shepard, Peter, Seligmann, Bruce

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A gene expression signature for Alzheimer’s from finger prick blood spotted on a filter paper card von Seligmann, Bruce, Babic, Milos, Scully, Kathleen, Yeakley, Joanne M, Sahagian, Gregory

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Abstract 5241: Whole transcriptome TempO-Seq profiling of focal areas of H&E stained FFPE: Differentiation of normal colon and cancer phenotypes between donors von Trejo, Christy, Imler, Elliot, Babic, Milos, Shepard, Peter, Nagle, Raymond, Yeakley, Joanne, Seligmann, Bruce

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Targeted whole transcriptome gene expression profiling for mechanistic toxicology von VanSteenhouse, Harper, Shepard, Peter, Yeakley, Joanne, Seligmann, Bruce

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Abstract C059: Clinical and molecular profile of renal cell carcinoma in Hispanic Americans, Native Americans, and European Americans von Batai, Ken, Harb de la Rosa, Alfredo, Gachupin, Francine, Imlaer, Elliot, Bracamonte, Erika R., Seligmann, Bruce, Lee, Benjamin R.

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Comparison of base-line and chemical-induced transcriptomic responses in HepaRG and RPTEC/TERT1 cells using TempO-Seq von Limonciel, Alice, Ates, Gamze, Carta, Giada, Wilmes, Anja, Watzele, Manfred, Shepard, Peter J., VanSteenhouse, Harper C., Seligmann, Bruce, Yeakley, Joanne M., van de Water, Bob, Vinken, Mathieu, Jennings, Paul

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Abstract 2106: Focal gene expression profiling of counterstained FFPE with correlation to morphology using TempO-Seq von Imler, Elliot, Babic, Milos, Adams, Deanna, Shepard, Peter, Yeakley, Joanne, Nagle, Raymond B., Seligmann, Bruce

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Abstract 3205: classifieRc: An interactive web interface for the molecular classification of colorectal cancer from RNA-sequencing data von Quinn, Gerard, Sessler, Tamas, Allen, Wendy, Maguire, Sarah, Dunne, Philip, McArt, Darragh, VanSteenhouse, Harper, Gallagher, Peter, Lees, Andrea, Longley, Dan, Seligmann, Bruce, Wappett, Mark, McDade, Simon

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