Proximal Newton-Type Methods for Minimizing Composite Functions von Lee, Jason D, Sun, Yuekai, Saunders, Michael A

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SNOPT: An SQP Algorithm for Large-Scale Constrained Optimization von Gill, Philip E., Murray, Walter, Saunders, Michael A.

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A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organisms von Ponnapalli, Sri Priya, Saunders, Michael A, Van Loan, Charles F, Alter, Orly

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DynamicME: dynamic simulation and refinement of integrated models of metabolism and protein expression von Yang, Laurence, Ebrahim, Ali, Lloyd, Colton J, Saunders, Michael A, Palsson, Bernhard O

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SNOPT: An SQP Algorithm for Large-Scale Constrained Optimization von Gill, Philip E., Murray, Walter, Saunders, Michael A.

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Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data von Yang, Laurence, Tan, Justin, O’Brien, Edward J., Monk, Jonathan M., Kim, Donghyuk, Li, Howard J., Charusanti, Pep, Ebrahim, Ali, Lloyd, Colton J., Yurkovich, James T., Du, Bin, Dräger, Andreas, Thomas, Alex, Sun, Yuekai, Saunders, Michael A., Palsson, Bernhard O.

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LSRN: A PARALLEL ITERATIVE SOLVER FOR STRONGLY OVER- OR UNDERDETERMINED SYSTEMS von Meng, Xiangrui, Saunders, Michael A, Mahoney, Michael W

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SpaseLoc: An Adaptive Subproblem Algorithm for Scalable Wireless Sensor Network Localization von Carter, Michael W., Jin, Holly H., Saunders, Michael A., Ye, Yinyu

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solveME: fast and reliable solution of nonlinear ME models von Yang, Laurence, Ma, Ding, Ebrahim, Ali, Lloyd, Colton J, Saunders, Michael A, Palsson, Bernhard O

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Principles of proteome allocation are revealed using proteomic data and genome-scale models von Yang, Laurence, Yurkovich, James T., Lloyd, Colton J., Ebrahim, Ali, Saunders, Michael A., Palsson, Bernhard O.

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Atomic Decomposition by Basis Pursuit von Chen, Scott Shaobing, Donoho, David L., Saunders, Michael A.

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Dynamic Regulation of Cyclooxygenase-2 Promoter Activity by Isoforms of CCAAT/Enhancer-binding Proteins von Zhu, Ying, Saunders, Michael A., Yeh, Howard, Deng, Wu-guo, Wu, Kenneth K.

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MINRES-QLP: A KRYLOV SUBSPACE METHOD FOR INDEFINITE OR SINGULAR SYMMETRIC SYSTEMS von CHOI, Sou-Cheng T, PAIGE, Christopher C, SAUNDERS, Michael A

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Reliable and efficient solution of genome-scale models of Metabolism and macromolecular Expression von Ma, Ding, Yang, Laurence, Fleming, Ronan M. T., Thiele, Ines, Palsson, Bernhard O., Saunders, Michael A.

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Conditions for duality between fluxes and concentrations in biochemical networks von Fleming, Ronan M.T., Vlassis, Nikos, Thiele, Ines, Saunders, Michael A.

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Atomic Decomposition by Basis Pursuit von Chen, Scott Shaobing, Donoho, David L., Saunders, Michael A.

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Algorithm 937: MINRES-QLP for Symmetric and Hermitian Linear Equations and Least-Squares Problems von CHOI, Sou-Cheng T, SAUNDERS, Michael A

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Robust flux balance analysis of multiscale biochemical reaction networks von Sun, Yuekai, Fleming, Ronan M T, Thiele, Ines, Saunders, Michael A

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Release of granulocyte‐macrophage colony stimulating factor by human cultured airway smooth muscle cells: suppression by dexamethasone von Saunders, Michael A., Mitchell, Jane A., Seldon, Paul M., Yacoub, Magdi H., Barnes, Peter J., Giembycz, Mark A., Belvisi, Maria G.

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COX-2 expression and cell cycle progression in human fibroblasts von Gilroy, Derek W, Saunders, Michael A, Wu, Kenneth K

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