Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities von Kleiner, Manuel, Bushnell, Brian, Sanderson, Kenneth E., Hooper, Lora V., Duerkop, Breck A.

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A Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis von Emond-Rheault, Jean-Guillaume, Jeukens, Julie, Freschi, Luca, Kukavica-Ibrulj, Irena, Boyle, Brian, Dupont, Marie-Josée, Colavecchio, Anna, Barrere, Virginie, Cadieux, Brigitte, Arya, Gitanjali, Bekal, Sadjia, Berry, Chrystal, Burnett, Elton, Cavestri, Camille, Chapin, Travis K, Crouse, Alanna, Daigle, France, Danyluk, Michelle D, Delaquis, Pascal, Dewar, Ken, Doualla-Bell, Florence, Fliss, Ismail, Fong, Karen, Fournier, Eric, Franz, Eelco, Garduno, Rafael, Gill, Alexander, Gruenheid, Samantha, Harris, Linda, Huang, Carol B, Huang, Hongsheng, Johnson, Roger, Joly, Yann, Kerhoas, Maud, Kong, Nguyet, Lapointe, Gisèle, Larivière, Line, Loignon, Stéphanie, Malo, Danielle, Moineau, Sylvain, Mottawea, Walid, Mukhopadhyay, Kakali, Nadon, Céline, Nash, John, Ngueng Feze, Ida, Ogunremi, Dele, Perets, Ann, Pilar, Ana V, Reimer, Aleisha R, Robertson, James, Rohde, John, Sanderson, Kenneth E, Song, Lingqiao, Stephan, Roger, Tamber, Sandeep, Thomassin, Paul, Tremblay, Denise, Usongo, Valentine, Vincent, Caroline, Wang, Siyun, Weadge, Joel T, Wiedmann, Martin, Wijnands, Lucas, Wilson, Emily D, Wittum, Thomas, Yoshida, Catherine, Youfsi, Khadija, Zhu, Lei, Weimer, Bart C, Goodridge, Lawrence, Levesque, Roger C

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Role of N-Acetylglucosamine within Core Lipopolysaccharide of Several Species of Gram-Negative Bacteria in Targeting the DC-SIGN (CD209) von Zhang, Pei, Snyder, Scott, Feng, Peter, Azadi, Parastoo, Zhang, Shusheng, Bulgheresi, Silvia, Sanderson, Kenneth E, He, Johnny, Klena, John, Chen, Tie

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High-Throughput Genotyping of Salmonella enterica Serovar Typhi Allowing Geographical Assignment of Haplotypes and Pathotypes within an Urban District of Jakarta, Indonesia von Baker, Stephen, Holt, Kathryn, van de Vosse, Esther, Roumagnac, Philippe, Whitehead, Sally, King, Emma, Ewels, Philip, Keniry, Andrew, Weill, François-Xavier, Lightfoot, Diane, van Dissel, Jaap T, Sanderson, Kenneth E, Farrar, Jeremy, Achtman, Mark, Deloukas, Panagiotis, Dougan, Gordon

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A novel linear plasmid mediates flagellar variation in Salmonella Typhi von Baker, Stephen, Hardy, Jonathan, Sanderson, Kenneth E, Quail, Michael, Goodhead, Ian, Kingsley, Robert A, Parkhill, Julian, Stocker, Bruce, Dougan, Gordon

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CTAG-containing cleavage site profiling to delineate Salmonella into natural clusters von Tang, Le, Liu, Wei-Qiao, Fang, Xin, Sun, Qiang, Zhu, Song-Ling, Wang, Chun-Xiao, Wang, Xiao-Yu, Li, Yong-Guo, Zhu, Da-Ling, Sanderson, Kenneth E, Johnston, Randal N, Liu, Gui-Rong, Liu, Shu-Lin

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Genome plasticity and ori-ter rebalancing in Salmonella typhi von Liu, Gui-Rong, Liu, Wei-Qiao, Johnston, Randal N, Sanderson, Kenneth E, Li, Shao-Xian, Liu, Shu-Lin

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Salmonella enterica Serovar Typhi Strains from Which SPI7, a 134-Kilobase Island with Genes for Vi Exopolysaccharide and Other Functions, Has Been Deleted von NAIR, Satheesh, ALOKAM, Suneetha, KOTHAPALLI, Sushma, PORWOLLIK, Steffan, PROCTOR, Emily, CHOY, Carmen, MCCLELLAND, Michael, LIU, Shu-Lin, SANDERSON, Kenneth E

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Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 von McClelland, Michael, Sanderson, Kenneth E, Spieth, John, Clifton, Sandra W, Latreille, Phil, Courtney, Laura, Porwollik, Steffen, Ali, Johar, Dante, Mike, Du, Feiyu, Hou, Shunfang, Layman, Dan, Leonard, Shawn, Nguyen, Christine, Scott, Kelsi, Holmes, Andrea, Grewal, Neenu, Mulvaney, Elizabeth, Ryan, Ellen, Sun, Hui, Florea, Liliana, Miller, Webb, Stoneking, Tamberlyn, Nhan, Michael, Waterston, Robert, Wilson, Richard K

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Diversity of Genome Structure in Salmonella enterica Serovar Typhi Populations von Kothapalli, Sushma, Nair, Satheesh, Alokam, Suneetha, Pang, Tikki, Khakhria, Rasik, Woodward, David, Johnson, Wendy, Stocker, Bruce A D, Sanderson, Kenneth E, Liu, Shu-Lin

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The Evolving Genome of Salmonella enterica Serovar Pullorum von Liu, Gui-Rong, Rahn, Andrea, Liu, Wei-Qiao, Sanderson, Kenneth E, Johnston, Randal N, Liu, Shu-Lin

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Comparison of genome degradation in Paratyphi A and Typhi, human-restricted serovars of Salmonella enterica that cause typhoid von McClelland, Michael, Sanderson, Kenneth E, Clifton, Sandra W, Latreille, Phil, Porwollik, Steffen, Sabo, Aniko, Meyer, Rekha, Bieri, Tamberlyn, Ozersky, Phil, McLellan, Michael, Harkins, C Richard, Wang, Chunyan, Nguyen, Christine, Berghoff, Amy, Elliott, Glendoria, Kohlberg, Sara, Strong, Cindy, Du, Feiyu, Carter, Jason, Kremizki, Colin, Layman, Dan, Leonard, Shawn, Sun, Hui, Fulton, Lucinda, Nash, William, Miner, Tracie, Minx, Patrick, Delehaunty, Kim, Fronick, Catrina, Magrini, Vincent, Nhan, Michael, Warren, Wesley, Florea, Liliana, Spieth, John, Wilson, Richard K

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The Genome of Salmonella enterica Serovar Gallinarum: Distinct Insertions/Deletions and Rare Rearrangements von WU, Kai-Yu, LIU, Gui-Rong, LIU, Wei-Qiao, WANG, Austin Q, SEN ZHAN, SANDERSON, Kenneth E, JOHNSTON, Randal N, LIU, Shu-Lin

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Bacterial Phylogenetic Clusters Revealed by Genome Structure von Liu, S L, Schryvers, A B, Sanderson, K E, Johnston, R N

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Inversions over the Terminus Region in Salmonella and Escherichia coli: IS200s as the Sites of Homologous Recombination Inverting the Chromosome of Salmonella enterica Serovar Typh... von Alokam, Suneetha, Liu, Shu-Lin, Said, Kamal, Sanderson, Kenneth E

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Genomic Diversification among Archival Strains of Salmonella enterica Serovar Typhimurium LT7 von Liu, Gui-Rong, Edwards, Kelly, Eisenstark, Abraham, Fu, Ying-Mei, Liu, Wei-Qiao, Sanderson, Kenneth E, Johnston, Randal N, Liu, Shu-Lin

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Multilocus sequence typing as a replacement for serotyping in Salmonella enterica von Achtman, Mark, Wain, John, Weill, François-Xavier, Nair, Satheesh, Zhou, Zhemin, Sangal, Vartul, Krauland, Mary G, Hale, James L, Harbottle, Heather, Uesbeck, Alexandra, Dougan, Gordon, Harrison, Lee H, Brisse, Sylvain

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Role of Genomic Rearrangements in Producing New Ribotypes of Salmonella typhi von Ng, I, Liu, S L, Sanderson, K E

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Genomic comparison of Salmonella typhimurium DT104 with non-DT104 strains von Zhao, Er-Ying, Bao, Hong-Xia, Tang, Le, Zou, Qing-Hua, Liu, Wei-Qiao, Zhu, Da-Ling, Chin, Jessica, Dong, Ying-Ying, Li, Yong-Guo, Cao, Feng-Lin, Poppe, Cornelis, Sanderson, Kenneth E., Johnston, Randal N., Zhou, Daoguo, Liu, Gui-Rong, Liu, Shu-Lin

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Highly Plastic Chromosomal Organization in Salmonella typhi von Liu, Shu-Lin, Sanderson, Kenneth E.

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