Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry von Dixon, Tom, MacPherson, Derek, Mostofian, Barmak, Dauzhenka, Taras, Lotz, Samuel, McGee, Dwight, Shechter, Sharon, Shrestha, Utsab R., Wiewiora, Rafal, McDargh, Zachary A., Pei, Fen, Pal, Rajat, Ribeiro, João V., Wilkerson, Tanner, Sachdeva, Vipin, Gao, Ning, Jain, Shourya, Sparks, Samuel, Li, Yunxing, Vinitsky, Alexander, Zhang, Xin, Razavi, Asghar M., Kolossváry, István, Imbriglio, Jason, Evdokimov, Artem, Bergeron, Louise, Zhou, Wenchang, Adhikari, Jagat, Ruprecht, Benjamin, Dickson, Alex, Xu, Huafeng, Sherman, Woody, Izaguirre, Jesus A.

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K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity von Kim, Chang Sik, Winn, Martyn D, Sachdeva, Vipin, Jordan, Kirk E

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OpenRBC: A Fast Simulator of Red Blood Cells at Protein Resolution von Tang, Yu-Hang, Lu, Lu, Li, He, Evangelinos, Constantinos, Grinberg, Leopold, Sachdeva, Vipin, Karniadakis, George Em

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OpenRBC: A Fast Simulator of Red Blood Cells at Protein Resolution von Tang, Yu-Hang, Lu, Lu, Li, He, Evangelinos, Constantinos, Grinberg, Leopold, Sachdeva, Vipin, Karniadakis, George Em

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Enabling High-Performance Computing as a Service von AbdelBaky, M., Parashar, M., Hyunjoo Kim, Jordan, K. E., Sachdeva, V., Sexton, J., Jamjoom, H., Zon-Yin Shae, Pencheva, G., Tavakoli, R., Wheeler, M. F.

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Exploring the viability of the Cell Broadband Engine for bioinformatics applications von Sachdeva, Vipin, Kistler, Michael, Speight, Evan, Tzeng, Tzy-Hwa Kathy

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Coupling a Basin Modeling and a Seismic Code using MOAB von Yan, Mi, Jordan, Kirk, Kaushik, Dinesh, Perrone, Michael, Sachdeva, Vipin, Tautges, Timothy J., Magerlein, John

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Evaluating Cell/B.E software cache for ClustalW von Sachdeva, V, Kistler, M, Bader, D A

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Particle Mesh Ewald for Molecular Dynamics in OpenCL on an FPGA Cluster von Stewart, Lawrence C, Pascoe, Carlo, Sherman, Brian W, Herbordt, Martin, Sachdeva, Vipin

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Evaluating the Jaccard-Tanimoto Index on Multi-core Architectures von Sachdeva, Vipin, Freimuth, Douglas M., Mueller, Chris

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Fully Integrated On-FPGA Molecular Dynamics Simulations von Yang, Chen, Geng, Tong, Wang, Tianqi, Patel, Rushi, Xiong, Qingqing, Sanaullah, Ahmed, Sheng, Jiayi, Lin, Charles, Sachdeva, Vipin, Sherman, Woody, Herbordt, Martin C

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All-to-all comparisons on architectures having limited storage space von FREIMUTH DOUGLAS M, SACHDEVA VIPIN

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Particle Mesh Ewald for Molecular Dynamics in OpenCL on an FPGA Cluster von Stewart, Lawrence C, Pascoe, Carlo, Sherman, Brian W, Herbordt, Martin, Sachdeva, Vipin

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All-to-All Comparisons on Architectures Having Limited Storage Space von FREIMUTH DOUGLAS M, SACHDEVA VIPIN

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All-to-all comparisons on architectures having limited storage space von FREIMUTH DOUGLAS M, SACHDEVA VIPIN

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Additional file 1 von Kim, Chang, Winn, Martyn, Vipin Sachdeva, Jordan, Kirk

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OpenRBC: A Fast Simulator of Red Blood Cells at Protein Resolution von Yu-Hang, Tang, Lu, Lu, He, Li, Evangelinos, Constantinos, Grinberg, Leopold, Sachdeva, Vipin, Karniadakis, George Em

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All-to-All Comparisons on Architectures Having Limited Storage Space von FREIMUTH DOUGLAS M, SACHDEVA VIPIN

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Fully Integrated On-FPGA Molecular Dynamics Simulations von Chen, Yang, Geng, Tong, Wang, Tianqi, Patel, Rushi, Xiong, Qingqing, Sanaullah, Ahmed, Sheng, Jiayi, Lin, Charles, Sachdeva, Vipin, Sherman, Woody, Herbordt, Martin C

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Prediction of ternary complex structures using molecular dynamics and proteomics von Dixon, Thomas, MacPherson, Derek, Mostofian, Barmak, Dauzhenka, Taras, Lotz, Samuel, McGee, Dwight, ShecNew Upload Transform To Open Science Instructions: (I) Upload Minimum One File Or Fill-In Required Fields (Marked With A Red Star ). (Ii) Press "Save" To Save Your Upload For Editing Later. (Iii) When Ready, Press "Publish" To Finalize And Make Your Upload Public. Hter, Sharon, Specify Communities Which You Wish Your Upload To Appear In. The Owner Of The Community Will Be Notified, And Can Either Accept Or Reject Your Request.Please Make Sure Your Record Complies With The Content Policy Of The Communities You Add, Reported Abuse Will Be Followed By Account Inactivation.Shrestha, Utsab, Wiewiora, Rafal, McDargh, Zachary, Pei, Fen, Pal, Rajat, Ribeiro, Joao, Wilkerson, Tanner, Sachdeva, Vipin, Goa, Ning, Jain, Shourya, Sparks, Samuel, Li, Yunxing, Vinitsky, Alexander, Zhang, Xin, Razavi, Asghar, Kolossvary, Istvan, Imbriglio, Jason, Evdokimov, Artem, Bergeron, Louise, Zhou, Wenchang, Adhikari, Jagat, Ruprecht, Benjamin, Dickson, Alex, Xu, Huafeng, Sherman, Woody, Izaguirre, Jesus

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