Graph Convolutional Neural Networks for Predicting Drug-Target Interactions von Torng, Wen, Altman, Russ B

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3D deep convolutional neural networks for amino acid environment similarity analysis von Torng, Wen, Altman, Russ B

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Machine learning in chemoinformatics and drug discovery von Lo, Yu-Chen, Rensi, Stefano E., Torng, Wen, Altman, Russ B.

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Informatics confronts drug–drug interactions von Percha, Bethany, Altman, Russ B

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Predicting non-small cell lung cancer prognosis by fully automated microscopic pathology image features von Yu, Kun-Hsing, Zhang, Ce, Berry, Gerald J., Altman, Russ B., Ré, Christopher, Rubin, Daniel L., Snyder, Michael

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COLLAPSE: A representation learning framework for identification and characterization of protein structural sites von Derry, Alexander, Altman, Russ B.

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Protein sequence design with a learned potential von Anand, Namrata, Eguchi, Raphael, Mathews, Irimpan I., Perez, Carla P., Derry, Alexander, Altman, Russ B., Huang, Po-Ssu

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Multilingual translation for zero-shot biomedical classification using BioTranslator von Xu, Hanwen, Woicik, Addie, Poon, Hoifung, Altman, Russ B., Wang, Sheng

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PharmGKB: A worldwide resource for pharmacogenomic information von Barbarino, Julia M., Whirl‐Carrillo, Michelle, Altman, Russ B., Klein, Teri E.

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Predicting HLA class II antigen presentation through integrated deep learning von Chen, Binbin, Khodadoust, Michael S., Olsson, Niclas, Wagar, Lisa E., Fast, Ethan, Liu, Chih Long, Muftuoglu, Yagmur, Sworder, Brian J., Diehn, Maximilian, Levy, Ronald, Davis, Mark M., Elias, Joshua E., Altman, Russ B., Alizadeh, Ash A.

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PharmGKB: The Pharmacogenomics Knowledge Base von Thorn, Caroline F., Klein, Teri E., Altman, Russ B.

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Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways von Kohlhoff, Kai J., Shukla, Diwakar, Lawrenz, Morgan, Bowman, Gregory R., Konerding, David E., Belov, Dan, Altman, Russ B., Pande, Vijay S.

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Data-driven human transcriptomic modules determined by independent component analysis von Zhou, Weizhuang, Altman, Russ B

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WS-SNPs&GO: a web server for predicting the deleterious effect of human protein variants using functional annotation von Capriotti, Emidio, Calabrese, Remo, Fariselli, Piero, Martelli, Pier Luigi, Altman, Russ B, Casadio, Rita

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Construction of disease-specific cytokine profiles by associating disease genes with immune responses von Liu, Tianyun, Wang, Shiyin, Wornow, Michael, Altman, Russ B

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Large-scale labeling and assessment of sex bias in publicly available expression data von Flynn, Emily, Chang, Annie, Altman, Russ B.

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Learning the Structure of Biomedical Relationships from Unstructured Text von Percha, Bethany, Altman, Russ B

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Quantifying the Severity of Adverse Drug Reactions Using Social Media: Network Analysis von Lavertu, Adam, Hamamsy, Tymor, Altman, Russ B.

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A deep learning framework to predict binding preference of RNA constituents on protein surface von Lam, Jordy Homing, Li, Yu, Zhu, Lizhe, Umarov, Ramzan, Jiang, Hanlun, Héliou, Amélie, Sheong, Fu Kit, Liu, Tianyun, Long, Yongkang, Li, Yunfei, Fang, Liang, Altman, Russ B., Chen, Wei, Huang, Xuhui, Gao, Xin

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Bioinformatics challenges for personalized medicine von Fernald, Guy Haskin, Capriotti, Emidio, Daneshjou, Roxana, Karczewski, Konrad J., Altman, Russ B.

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