LipoCLEAN: A Machine Learning Filter to Improve Untargeted Lipid Identification Confidence von Tavis, Steven L., Keller, Matthew J., Stai, Andrew J., Rush, Tomás A., Hettich, Robert L.

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The Ectomycorrhizal Fungus Laccaria bicolor Produces Lipochitooligosaccharides and Uses the Common Symbiosis Pathway to Colonize Populus Roots von Cope, Kevin R., Bascaules, Adeline, Irving, Thomas B., Venkateshwaran, Muthusubramanian, Maeda, Junko, Garcia, Kevin, Rush, Tomás A., Ma, Cathleen, Labbé, Jessy, Jawdy, Sara, Steigerwald, Edward, Setzke, Jonathan, Fung, Emmeline, Schnell, Kimberly G., Wang, Yunqian, Schlief, Nathaniel, Bücking, Heike, Strauss, Steven H., Maillet, Fabienne, Jargeat, Patricia, Bécard, Guillaume, Puech-Pagès, Virginie, Ané, Jean-Michel

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Microevolution in the pansecondary metabolome of Aspergillus flavus and its potential macroevolutionary implications for filamentous fungi von Drott, Milton T., Rush, Tomás A., Satterlee, Tatum R., Giannone, Richard J., Abraham, Paul E., Greco, Claudio, Venkatesh, Nandhitha, Skerker, Jeffrey M., Glass, N. Louise, Labbé, Jesse L., Milgroom, Michael G., Keller, Nancy P.

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A glimpse into the fungal metabolomic abyss: Novel network analysis reveals relationships between exogenous compounds and their outputs von Gopalakrishnan Meena, Muralikrishnan, Lane, Matthew J, Tannous, Joanna, Carrell, Alyssa A, Abraham, Paul E, Giannone, Richard J, Ané, Jean-Michel, Keller, Nancy P, Labbé, Jesse L, Geiger, Armin G, Kainer, David, Jacobson, Daniel A, Rush, Tomás A

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Lipo-Chitooligosaccharides Induce Specialized Fungal Metabolite Profiles That Modulate Bacterial Growth von Rush, Tomás A, Tannous, Joanna, Lane, Matthew J, Gopalakrishnan Meena, Muralikrishnan, Carrell, Alyssa A, Golan, Jacob J, Drott, Milton T, Cottaz, Sylvain, Fort, Sébastien, Ané, Jean-Michel, Keller, Nancy P, Pelletier, Dale A, Jacobson, Daniel A, Kainer, David, Abraham, Paul E, Giannone, Richard J, Labbé, Jesse L

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Expanding the Biological Role of Lipo-Chitooligosaccharides and Chitooligosaccharides in Laccaria bicolor Growth and Development von Villalobos Solis, Manuel I., Engle, Nancy L., Spangler, Margaret K., Cottaz, Sylvain, Fort, Sébastien, Maeda, Junko, Ané, Jean-Michel, Tschaplinski, Timothy J., Labbé, Jesse L., Hettich, Robert L., Abraham, Paul E., Rush, Tomás A.

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amPEPpy 1.0: a portable and accurate antimicrobial peptide prediction tool von Lawrence, Travis J, Carper, Dana L, Spangler, Margaret K, Carrell, Alyssa A, Rush, Tomás A, Minter, Stephen J, Weston, David J, Labbé, Jessy L

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LaeA-Regulated Fungal Traits Mediate Bacterial Community Assembly von Tannous, Joanna, Cosetta, Casey M, Drott, Milton T, Rush, Tomás A, Abraham, Paul E, Giannone, Richard J, Keller, Nancy P, Wolfe, Benjamin E

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Bioprospecting Trichoderma: A Systematic Roadmap to Screen Genomes and Natural Products for Biocontrol Applications von Rush, Tomás A., Shrestha, Him K., Gopalakrishnan Meena, Muralikrishnan, Spangler, Margaret K., Ellis, J. Christopher, Labbé, Jesse L., Abraham, Paul E.

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Differences in spore size and atmospheric survival shape Stark contrasts in the dispersal dynamics of two closely related fungal pathogens von Golan, Jacob J., Lagomarsino Oneto, Daniele, Ding, Shunping, Kessenich, Richard, Sandler, Melvin, Rush, Tomás A., Levitis, Daniel, Gevens, Amanda, Seminara, Agnese, Pringle, Anne

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Fungal elemental profiling unleashed through rapid laser-induced breakdown spectroscopy (LIBS) von Rush, Tomás A, Wymore, Ann M, Rodríguez, Jr, Miguel, Jawdy, Sara, Vilgalys, Rytas J, Martin, Madhavi Z, Andrews, Hunter B

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Interactions with microbial consortia have variable effects in organic carbon and production of exometabolites among genotypes of Populus trichocarpa von Carrell, Alyssa A., Clark, Miranda, Jawdy, Sara, Muchero, Wellington, Alexandre, Gladys, Labbé, Jesse L., Rush, Tomás A.

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A small secreted protein serves as a plant-derived effector mediating symbiosis between Populus and Laccaria bicolor von Liu, Yang, Zhang, Feng, Devireddy, Amith R, Ployet, Raphael A, Rush, Tomás A, Lu, Haiwei, Hassan, Md Mahmudul, Yuan, Guoliang, Rajput, Ruchika, Islam, Md Torikul, Agrawal, Rekha, Abraham, Paul E, Chen, Jin-Gui, Muchero, Wellington, Martin, Francis, Veneault-Fourrey, Claire, Yang, Xiaohan

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amPEPpy 1.0: a portable and accurate antimicrobial peptide prediction tool von Lawrence, Travis J., Carper, Dana L., Spangler, Margaret K., Carrell, Alyssa A., Rush, Tomás A., Minter, Stephen J., Weston, David J., Labbé, Jessy L., Pier Luigi, ed., Martelli

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Microevolution in the pansecondary metabolome of Aspergillus flavus and its potential macroevolutionary implications for filamentous fungi von Drott, Milton T., Rush, Tomás A., Satterlee, Tatum R., Giannone, Richard J., Abraham, Paul E., Greco, Claudio, Venkatesh, Nandhitha, Skerker, Jeffrey M., Glass, N. Louise, Labbé, Jesse L., Milgroom, Michael G., Keller, Nancy P.

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The Ectomycorrhizal Fungus Laccaria bicolor Produces Lipochitooligosaccharides and Uses the Common Symbiosis Pathway to Colonize Populus Roots von Cope, Kevin R., Bascaules, Adeline, Irving, Thomas B., Venkateshwaran, Muthusubramanian, Maeda, Junko, Garcia, Kevin, Rush, Tomás A., Ma, Cathleen, Labbé, Jessy, Jawdy, Sara, Steigerwald, Edward, Setzke, Jonathan, Fung, Emmeline, Schnell, Kimberly G., Wang, Yunqian, Schleif, Nathaniel, Bücking, Heike, Strauss, Steven H., Maillet, Fabienne, Jargeat, Patricia, Bécard, Guillaume, Puech-Pagès, Virginie, Ané, Jean-Michel

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The Ectomycorrhizal Fungus Laccaria bicolor Produces Lipochitooligosaccharides and Uses the Common Symbiosis Pathway to Colonize Populus Roots von Cope, Kevin R, Bascaules, Adeline, Irving, Thomas B, Venkateshwaran, Muthusubramanian, Maeda, Junko, Garcia, Kevin, Rush, Tomás A, Ma, Cathleen, Labbé, Jessy, Jawdy, Sara, Steigerwald, Edward, Setzke, Jonathan, Fung, Emmeline, Schnell, Kimberly G, Wang, Yunqian, Schleif, Nathaniel, Bücking, Heike, Strauss, Steven H, Maillet, Fabienne, Jargeat, Patricia, Bécard, Guillaume, Puech-Pagès, Virginie, Ané, Jean-Michel

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Complete genome of Pseudomonas putida strain WBB028 isolated from leaf litter von Pelletier, D A, Alexander, W, Burdick, L H, Rush, T A, Tannous, J, Webb, A B, Morrell-Falvey, J L

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USING BIPARTITE NETWORKS TO DETERMINE INTERACTIONS BETWEEN ANALYTES AND CHEMICAL TREATMENTS von Lane, Matthew J, Rush, Tomas A, Meena, Muralikrishnan Gopalakrishnan, Tannous, Joanna, Geiger, Armin Guntram, Jacobson, Daniel Allan

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A glimpse into the fungal metabolomic abyss: Novel network analysis reveals relationships between exogenous compounds and their outputs von Meena, Muralikrishnan Gopalakrishnan, Lane, Matthew J, Tannous, Joanna, Carrell, Alyssa A, Abraham, Paul E, Giannone, Richard J, Ane, Jean-Michel, Keller, Nancy P, Labbe, Jesse L, Geiger, Armin G, Kainer, David, Jacobson, Daniel A, Rush, Tomas A

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