Inferring phylogenies from RAD sequence data von Rubin, Benjamin E R, Ree, Richard H, Moreau, Corrie S

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Investigating the impact of storage conditions on microbial community composition in soil samples von Rubin, Benjamin E R, Gibbons, Sean M, Kennedy, Suzanne, Hampton-Marcell, Jarrad, Owens, Sarah, Gilbert, Jack A

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Divergence across diet, time and populations rules out parallel evolution in the gut microbiomes of Trinidadian guppies von Sullam, Karen E, Rubin, Benjamin ER, Dalton, Christopher M, Kilham, Susan S, Flecker, Alexander S, Russell, Jacob A

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Surveying the Microbiome of Ants: Comparing 454 Pyrosequencing with Traditional Methods To Uncover Bacterial Diversity von KAUTZ, Stefanie, RUBIN, Benjamin E. R, RUSSELL, Jacob A, MOREAU, Corrie S

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The genetic basis of a social polymorphism in halictid bees von Kocher, Sarah D., Mallarino, Ricardo, Rubin, Benjamin E. R., Yu, Douglas W., Hoekstra, Hopi E., Pierce, Naomi E.

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Comparative genomics reveals convergent rates of evolution in ant–plant mutualisms von Rubin, Benjamin E. R., Moreau, Corrie S.

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The transcriptomic signature of low aggression in honey bees resembles a response to infection von Rittschof, Clare C, Rubin, Benjamin E R, Palmer, Joseph H

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circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth von Diamond, Spencer, Jun, Darae, Rubin, Benjamin E, Golden, Susan S

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The circadian clock and darkness control natural competence in cyanobacteria von Taton, Arnaud, Erikson, Christian, Yang, Yiling, Rubin, Benjamin E., Rifkin, Scott A., Golden, James W., Golden, Susan S.

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A Hard Day’s Night: Cyanobacteria in Diel Cycles von Welkie, David G., Rubin, Benjamin E., Diamond, Spencer, Hood, Rachel D., Savage, David F., Golden, Susan S.

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The essential gene set of a photosynthetic organism von Rubin, Benjamin E., Wetmore, Kelly M., Price, Morgan N., Diamond, Spencer, Shultzaberger, Ryan K., Lowe, Laura C., Curtin, Genevieve, Arkin, Adam P., Deutschbauer, Adam, Golden, Susan S.

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Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis von Broddrick, Jared T., Rubin, Benjamin E., Welkie, David G., Du, Niu, Mih, Nathan, Diamond, Spencer, Lee, Jenny J., Golden, Susan S., Palsson, Bernhard O.

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Dietary specialization in mutualistic acacia‐ants affects relative abundance but not identity of host‐associated bacteria von Rubin, Benjamin E. R., Kautz, Stefanie, Wray, Brian D., Moreau, Corrie S.

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Mutant phenotypes for thousands of bacterial genes of unknown function von Price, Morgan N., Wetmore, Kelly M., Waters, R. Jordan, Callaghan, Mark, Ray, Jayashree, Liu, Hualan, Kuehl, Jennifer V., Melnyk, Ryan A., Lamson, Jacob S., Suh, Yumi, Carlson, Hans K., Esquivel, Zuelma, Sadeeshkumar, Harini, Chakraborty, Romy, Zane, Grant M., Rubin, Benjamin E., Wall, Judy D., Visel, Axel, Bristow, James, Blow, Matthew J., Arkin, Adam P., Deutschbauer, Adam M.

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Diversity and Persistence of the Gut Microbiome of the Giant Neotropical Bullet Ant von Moreau, Corrie S., Rubin, Benjamin E. R.

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High-throughput interaction screens illuminate the role of c-di-AMP in cyanobacterial nighttime survival von Rubin, Benjamin E, Huynh, TuAnh Ngoc, Welkie, David G, Diamond, Spencer, Simkovsky, Ryan, Pierce, Emily C, Taton, Arnaud, Lowe, Laura C, Lee, Jenny J, Rifkin, Scott A, Woodward, Joshua J, Golden, Susan S

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Rate variation in the evolution of non-coding DNA associated with social evolution in bees von Rubin, Benjamin E R, Jones, Beryl M, Hunt, Brendan G, Kocher, Sarah D

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Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA von Welkie, David G., Rubin, Benjamin E., Chang, Yong-Gang, Diamond, Spencer, Rifkin, Scott A., LiWang, Andy, Golden, Susan S.

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Individual differences in honey bee behavior enabled by plasticity in brain gene regulatory networks von Jones, Beryl M., Rao, Vikyath D., Gernat, Tim, Jagla, Tobias, Cash-Ahmed, Amy C., Rubin, Benjamin E. R., Comi, Troy J., Bhogale, Shounak, Husain, Syed S., Blatti, Charles, Middendorf, Martin, Sinha, Saurabh, Chandrasekaran, Sriram, Robinson, Gene E.

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Secondary invasion? Emerald ash borer (Agrilus planipennis) induced ash (Fraxinus spp.) mortality interacts with ecological integrity to facilitate European buckthorn (Rhamnus cath... von Baron, Jennifer N, Rubin, Benjamin D

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