An Interdisciplinary Approach to Understand the Resilience of Agrosystems in the Sahel and West Africa von Descroix, Luc, Luxereau, Anne, Lambert, Laurent A, Ruë, Olivier, Diedhiou, Arona, Diongue-Niang, Aïda, Dia, Amadou Hamath, Gangneron, Fabrice, Manga, Sylvie Paméla, Diedhiou, Ange B, Andrieu, Julien, Chevalier, Patrick, Faty, Bakary

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Gut bacteria are critical for optimal muscle function: a potential link with glucose homeostasis von Nay, Kevin, Jollet, Maxence, Goustard, Benedicte, Baati, Narjes, Vernus, Barbara, Pontones, Maria, Lefeuvre-Orfila, Luz, Bendavid, Claude, Rué, Olivier, Mariadassou, Mahendra, Bonnieu, Anne, Ollendorff, Vincent, Lepage, Patricia, Derbré, Frédéric, Koechlin-Ramonatxo, Christelle

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Deciphering intra-species bacterial diversity of meat and seafood spoilage microbiota using gyrB amplicon sequencing: A comparative analysis with 16S rDNA V3-V4 amplicon sequencing von Poirier, Simon, Rué, Olivier, Peguilhan, Raphaëlle, Coeuret, Gwendoline, Zagorec, Monique, Champomier-Vergès, Marie-Christine, Loux, Valentin, Chaillou, Stéphane

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Comparative analysis of bacterial diversity in clouds and aerosols von Péguilhan, Raphaëlle, Rossi, Florent, Rué, Olivier, Joly, Muriel, Amato, Pierre

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FROGS: a powerful tool to analyse the diversity of fungi with special management of internal transcribed spacers von Bernard, Maria, Rue, Olivier, Mariadassou, Mahendra, Pascal, Geraldine

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Insight into the Role of Gut Microbiota in Duchenne Muscular Dystrophy: An Age-Related Study in Mdx Mice von Jollet, Maxence, Mariadassou, Mahendra, Rué, Olivier, Pessemesse, Laurence, Ollendorff, Vincent, Ramdani, Sofiane, Vernus, Barbara, Bonnieu, Anne, Bertrand-Gaday, Christelle, Goustard, Bénédicte, Koechlin-Ramonatxo, Christelle

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Characterization of an extensive rainbow trout miRNA transcriptome by next generation sequencing von Juanchich, Amelie, Bardou, Philippe, Rué, Olivier, Gabillard, Jean-Charles, Gaspin, Christine, Bobe, Julien, Guiguen, Yann

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Microbial communities of a variety of 75 homemade fermented vegetables von Thierry, Anne, Madec, Marie-Noelle, Chuat, Victoria, Bage, Anne-Sophie, Picard, Olivier, Grondin, Cécile, Rué, Olivier, Mariadassou, Mahendra, Marché, Laurent, Valence, Florence

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Oak genome reveals facets of long lifespan von Plomion, Christophe, Aury, Jean-Marc, Amselem, Joëlle, Leroy, Thibault, Murat, Florent, Duplessis, Sébastien, Faye, Sébastien, Francillonne, Nicolas, Labadie, Karine, Le Provost, Grégoire, Lesur, Isabelle, Bartholomé, Jérôme, Faivre-Rampant, Patricia, Kohler, Annegret, Leplé, Jean-Charles, Chantret, Nathalie, Chen, Jun, Diévart, Anne, Alaeitabar, Tina, Barbe, Valérie, Belser, Caroline, Bergès, Hélène, Bodénès, Catherine, Bogeat-Triboulot, Marie-Béatrice, Bouffaud, Marie-Lara, Brachi, Benjamin, Chancerel, Emilie, Cohen, David, Couloux, Arnaud, Da Silva, Corinne, Dossat, Carole, Ehrenmann, François, Gaspin, Christine, Grima-Pettenati, Jacqueline, Guichoux, Erwan, Hecker, Arnaud, Herrmann, Sylvie, Hugueney, Philippe, Hummel, Irène, Klopp, Christophe, Lalanne, Céline, Lascoux, Martin, Lasserre, Eric, Lemainque, Arnaud, Desprez-Loustau, Marie-Laure, Luyten, Isabelle, Madoui, Mohammed-Amin, Mangenot, Sophie, Marchal, Clémence, Maumus, Florian, Mercier, Jonathan, Michotey, Célia, Panaud, Olivier, Picault, Nathalie, Rouhier, Nicolas, Rué, Olivier, Rustenholz, Camille, Salin, Franck, Soler, Marçal, Tarkka, Mika, Velt, Amandine, Zanne, Amy E., Martin, Francis, Wincker, Patrick, Quesneville, Hadi, Kremer, Antoine, Salse, Jérôme

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Taxon Appearance From Extraction and Amplification Steps Demonstrates the Value of Multiple Controls in Tick Microbiota Analysis von Lejal, Emilie, Estrada-Pena, Agustin, Marsot, Maud, Cosson, Jean-Francois, Rue, Olivier, Mariadassou, Mahendra, Midoux, Cedric, Vayssier-Taussat, Muriel, Pollet, Thomas

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Effect of sodium chloride reduction or partial substitution with potassium chloride on the microbiological, biochemical and sensory characteristics of semi-hard and soft cheeses von Dugat-Bony, Eric, Bonnarme, Pascal, Fraud, Sébastien, Catellote, Jessie, Sarthou, Anne-Sophie, Loux, Valentin, Rué, Olivier, Bel, Nadège, Chuzeville, Sarah, Helinck, Sandra

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Does Physical Inactivity Induce Significant Changes in Human Gut Microbiota? New Answers Using the Dry Immersion Hypoactivity Model von Jollet, Maxence, Nay, Kevin, Chopard, Angele, Bareille, Marie-Pierre, Beck, Arnaud, Ollendorff, Vincent, Vernus, Barbara, Bonnieu, Anne, Mariadassou, Mahendra, Rue, Olivier, Derbre, Frederic, Goustard, Benedicte, Koechlin-Ramonatxo, Christelle

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In-depth characterization of a selection of gut commensal bacteria reveals their functional capacities to metabolize dietary carbohydrates with prebiotic potential von Bedu-Ferrari, Cassandre, Biscarrat, Paul, Pepke, Frederic, Vati, Sarah, Chaudemanche, Cyril, Castelli, Florence, Chollet, Céline, Rué, Olivier, Hennequet-Antier, Christelle, Langella, Philippe, Cherbuy, Claire

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Comparative metatranscriptomic analysis of anaerobic digesters treating anionic surfactant contaminated wastewater von Delforno, Tiago P., Macedo, Thais Z., Midoux, Cédric, Lacerda, Gileno V., Rué, Olivier, Mariadassou, Mahendra, Loux, Valentin, Varesche, Maria B.A., Bouchez, Théodore, Bize, Ariane, Oliveira, Valéria M.

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Virulent Phages Isolated from a Smear-Ripened Cheese Are Also Detected in Reservoirs of the Cheese Factory von Paillet, Thomas, Lossouarn, Julien, Figueroa, Clarisse, Midoux, Cédric, Rué, Olivier, Petit, Marie-Agnès, Dugat-Bony, Eric

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First step of odorant detection in the olfactory epithelium and olfactory preferences differ according to the microbiota profile in mice von Naudon, Laurent, François, Adrien, Mariadassou, Mahendra, Monnoye, Magali, Philippe, Catherine, Bruneau, Aurélia, Dussauze, Marie, Rué, Olivier, Rabot, Sylvie, Meunier, Nicolas

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Holistic integration of omics data reveals the drivers that shape the ecology of microbial meat spoilage scenarios von Poirier, Simon, Coeuret, Gwendoline, Champomier-Vergès, Marie-Christine, Desmonts, Marie-Hélène, Werner, Dalal, Feurer, Carole, Frémaux, Bastien, Guillou, Sandrine, Luong, Ngoc-Du Martin, Rué, Olivier, Loux, Valentin, Zagorec, Monique, Chaillou, Stéphane

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Microbial community dispersal from wheat grains to sourdoughs: A contribution of participatory research von Gastrow, Lucas, Michel, Elisa, Legrand, Judith, Amelot, Rémy, Segond, Diego, Guezenec, Stéphane, Rué, Olivier, Chable, Véronique, Goldringer, Isabelle, Dousset, Xavier, Serpolay‐Bessoni, Estelle, Taupier‐Letage, Bruno, Vindras‐Fouillet, Camille, Onno, Bernard, Valence, Florence, Sicard, Delphine

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Investigation of the Phageome and Prophages in French Cider, a Fermented Beverage von Ledormand, Pierre, Desmasures, Nathalie, Midoux, Cédric, Rué, Olivier, Dalmasso, Marion

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Comparison of Fecal Sample Collection Methods for Microbial Analysis Embedded within Colorectal Cancer Screening Programs von Zouiouich, Semi, Mariadassou, Mahendra, Rué, Olivier, Vogtmann, Emily, Huybrechts, Inge, Severi, Gianluca, Boutron-Ruault, Marie-Christine, Senore, Carlo, Naccarati, Alessio, Mengozzi, Giulio, Kozlakidis, Zisis, Jenab, Mazda, Sinha, Rashmi, Gunter, Marc J, Leclerc, Marion

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