Evolution of the SARS‐CoV‐2 omicron variants BA.1 to BA.5: Implications for immune escape and transmission von Shrestha, Lok Bahadur, Foster, Charles, Rawlinson, William, Tedla, Nicodemus, Bull, Rowena A.

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Broadly-Neutralizing Antibodies Against Emerging SARS-CoV-2 Variants von Shrestha, Lok Bahadur, Tedla, Nicodemus, Bull, Rowena A.

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Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis von Bull, Rowena A., Adikari, Thiruni N., Ferguson, James M., Hammond, Jillian M., Stevanovski, Igor, Beukers, Alicia G., Naing, Zin, Yeang, Malinna, Verich, Andrey, Gamaarachchi, Hasindu, Kim, Ki Wook, Luciani, Fabio, Stelzer-Braid, Sacha, Eden, John-Sebastian, Rawlinson, William D., van Hal, Sebastiaan J., Deveson, Ira W.

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Rapid evolution of pandemic noroviruses of the GII.4 lineage von Bull, Rowena A, Eden, John-Sebastian, Rawlinson, William D, White, Peter A

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The Interferon-induced Transmembrane Proteins, IFITM1, IFITM2, and IFITM3 Inhibit Hepatitis C Virus Entry von Narayana, Sumudu K., Helbig, Karla J., McCartney, Erin M., Eyre, Nicholas S., Bull, Rowena A., Eltahla, Auda, Lloyd, Andrew R., Beard, Michael R.

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Norovirus recombination von Bull, Rowena A, Tanaka, Mark M, White, Peter A

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Clonally diverse CD38+HLA-DR+CD8+ T cells persist during fatal H7N9 disease von Wang, Zhongfang, Zhu, Lingyan, Nguyen, Thi H. O., Wan, Yanmin, Sant, Sneha, Quiñones-Parra, Sergio M., Crawford, Jeremy Chase, Eltahla, Auda A., Rizzetto, Simone, Bull, Rowena A., Qiu, Chenli, Koutsakos, Marios, Clemens, E. Bridie, Loh, Liyen, Chen, Tianyue, Liu, Lu, Cao, Pengxing, Ren, Yanqin, Kedzierski, Lukasz, Kotsimbos, Tom, McCaw, James M., La Gruta, Nicole L., Turner, Stephen J., Cheng, Allen C., Luciani, Fabio, Zhang, Xiaoyan, Doherty, Peter C., Thomas, Paul G., Xu, Jianqing, Kedzierska, Katherine

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Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection von Bull, Rowena A, Luciani, Fabio, McElroy, Kerensa, Gaudieri, Silvana, Pham, Son T, Chopra, Abha, Cameron, Barbara, Maher, Lisa, Dore, Gregory J, White, Peter A, Lloyd, Andrew R

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Inhibitors of the Hepatitis C Virus Polymerase; Mode of Action and Resistance von Eltahla, Auda A, Luciani, Fabio, White, Peter A, Lloyd, Andrew R, Bull, Rowena A

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Viral quasispecies assembly via maximal clique enumeration von Töpfer, Armin, Marschall, Tobias, Bull, Rowena A, Luciani, Fabio, Schönhuth, Alexander, Beerenwinkel, Niko

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Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing von Kim, Ki Wook, Deveson, Ira W., Pang, Chi Nam I., Yeang, Malinna, Naing, Zin, Adikari, Thiruni, Hammond, Jillian M., Stevanovski, Igor, Beukers, Alicia G., Verich, Andrey, Yin, Simon, McFarlane, David, Wilkins, Marc R., Stelzer-Braid, Sacha, Bull, Rowena A., Craig, Maria E., van Hal, Sebastiaan J., Rawlinson, William D.

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Broadly neutralizing antibodies from an individual that naturally cleared multiple hepatitis C virus infections uncover molecular determinants for E2 targeting and vaccine design von Keck, Zhen-Yong, Pierce, Brian G, Lau, Patrick, Lu, Janine, Wang, Yong, Underwood, Alexander, Bull, Rowena A, Prentoe, Jannick, Velázquez-Moctezuma, Rodrigo, Walker, Melanie R, Luciani, Fabio, Guest, Johnathan D, Fauvelle, Catherine, Baumert, Thomas F, Bukh, Jens, Lloyd, Andrew R, Foung, Steven K H

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Broadly neutralizing SARS-CoV-2 antibodies through epitope-based selection from convalescent patients von Rouet, Romain, Henry, Jake Y., Johansen, Matt D., Sobti, Meghna, Balachandran, Harikrishnan, Langley, David B., Walker, Gregory J., Lenthall, Helen, Jackson, Jennifer, Ubiparipovic, Stephanie, Mazigi, Ohan, Schofield, Peter, Burnett, Deborah L., Brown, Simon H. J., Martinello, Marianne, Hudson, Bernard, Gilroy, Nicole, Post, Jeffrey J., Kelleher, Anthony, Jäck, Hans-Martin, Goodnow, Christopher C., Turville, Stuart G., Rawlinson, William D., Bull, Rowena A., Stewart, Alastair G., Hansbro, Philip M., Christ, Daniel

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Maintenance of broad neutralizing antibodies and memory B cells 1 year post-infection is predicted by SARS-CoV-2-specific CD4+ T cell responses von Balachandran, Harikrishnan, Phetsouphanh, Chansavath, Agapiou, David, Adhikari, Anurag, Rodrigo, Chaturaka, Hammoud, Mohamed, Shrestha, Lok Bahadur, Keoshkerian, Elizabeth, Gupta, Money, Turville, Stuart, Christ, Daniel, King, Cecile, Sasson, Sarah C., Bartlett, Adam, Grubor-Bauk, Branka, Rawlinson, William, Aggarwal, Anupriya, Stella, Alberto Ospina, Klemm, Vera, Mina, Michael M., Post, Jeffrey J., Hudson, Bernard, Gilroy, Nicky, Konecny, Pam, Ahlenstiel, Golo, Dwyer, Dominic E., Sorrell, Tania C., Kelleher, Anthony, Tedla, Nicodemus, Lloyd, Andrew R., Martinello, Marianne, Bull, Rowena A.

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Contribution of Intra- and Interhost Dynamics to Norovirus Evolution von BULL, Rowena A, EDEN, John-Sebastian, LUCIANI, Fabio, MCELROY, Kerensa, RAWLINSON, William D, WHITE, Peter A

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Identification of human progenitors of exhausted CD8+ T cells associated with elevated IFN-γ response in early phase of viral infection von Cai, Curtis, Samir, Jerome, Pirozyan, Mehdi R., Adikari, Thiruni N., Gupta, Money, Leung, Preston, Hughes, Brendan, Van der Byl, Willem, Rizzetto, Simone, Elthala, Auda, Keoshkerian, Elizabeth, Palgen, Jean-Louis, Peters, Timothy, Nguyen, Thi H. O., Louie, Raymond, Kedzierska, Katherine, Gaudieri, Silvana, Bull, Rowena A., Lloyd, Andrew R., Luciani, Fabio

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Genome-Wide Mutagenesis of Dengue Virus Reveals Plasticity of the NS1 Protein and Enables Generation of Infectious Tagged Reporter Viruses von Eyre, Nicholas S, Johnson, Stephen M, Eltahla, Auda A, Aloi, Maria, Aloia, Amanda L, McDevitt, Christopher A, Bull, Rowena A, Beard, Michael R

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The Influence of Hepatitis C Virus Genetic Region on Phylogenetic Clustering Analysis von Lamoury, François M J, Jacka, Brendan, Bartlett, Sofia, Bull, Rowena A, Wong, Arthur, Amin, Janaki, Schinkel, Janke, Poon, Art F, Matthews, Gail V, Grebely, Jason, Dore, Gregory J, Applegate, Tanya L

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A method for near full-length amplification and sequencing for six hepatitis C virus genotypes von Bull, Rowena A, Eltahla, Auda A, Rodrigo, Chaturaka, Koekkoek, Sylvie M, Walker, Melanie, Pirozyan, Mehdi R, Betz-Stablein, Brigid, Toepfer, Armin, Laird, Melissa, Oh, Steve, Heiner, Cheryl, Maher, Lisa, Schinkel, Janke, Lloyd, Andrew R, Luciani, Fabio

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Conserved epitopes with high HLA-I population coverage are targets of CD8+ T cells associated with high IFN-γ responses against all dengue virus serotypes von Adikari, Thiruni N., Di Giallonardo, Francesca, Leung, Preston, Grifoni, Alba, Sette, Alex, Weiskopf, Daniela, Bull, Rowena A., Luciani, Fabio

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