Transcriptome assembly from long-read RNA-seq alignments with StringTie2 von Kovaka, Sam, Zimin, Aleksey V, Pertea, Geo M, Razaghi, Roham, Salzberg, Steven L, Pertea, Mihaela

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Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing von Lee, Isac, Razaghi, Roham, Gilpatrick, Timothy, Molnar, Michael, Gershman, Ariel, Sadowski, Norah, Sedlazeck, Fritz J., Hansen, Kasper D., Simpson, Jared T., Timp, Winston

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Epigenetic patterns in a complete human genome von Gershman, Ariel, Sauria, Michael E G, Guitart, Xavi, Vollger, Mitchell R, Hook, Paul W, Hoyt, Savannah J, Jain, Miten, Shumate, Alaina, Razaghi, Roham, Koren, Sergey, Altemose, Nicolas, Caldas, Gina V, Logsdon, Glennis A, Rhie, Arang, Eichler, Evan E, Schatz, Michael C, O'Neill, Rachel J, Phillippy, Adam M, Miga, Karen H, Timp, Winston

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Plasma virome and the risk of blood-borne infection in persons with substance use disorder von Kandathil, Abraham J., Cox, Andrea L., Page, Kimberly, Mohr, David, Razaghi, Roham, Ghanem, Khalil G., Tuddenham, Susan A., Hsieh, Yu-Hsiang, Evans, Jennifer L., Coller, Kelly E., Timp, Winston, Celentano, David D., Ray, Stuart C., Thomas, David L.

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Direct detection of RNA modifications and structure using single-molecule nanopore sequencing von Stephenson, William, Razaghi, Roham, Busan, Steven, Weeks, Kevin M., Timp, Winston, Smibert, Peter

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De novo genome assembly of the tobacco hornworm moth (Manduca sexta) von Gershman, Ariel, Romer, Tatiana G., Fan, Yunfan, Razaghi, Roham, Smith, Wendy A., Timp, Winston

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Signal Analysis of Nanopore RNA Sequencing to Interrogate Poly(A) Tails and Post-Transcriptional Modifications von Razaghi, Roham

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Signal Analysis of Nanopore RNA Sequencing to Interrogate Poly(A) Tails and Post-Transcriptional Modifications von Razaghi, Roham, Gilpatrick, Timothy, Sadowski, Norah, Tang, Paul, Workman, Rachael, Simpson, Jared, Timp, Winston

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Nanopore native RNA sequencing of a human poly(A) transcriptome von Workman, Rachael E., Tang, Alison D., Tang, Paul S., Jain, Miten, Tyson, John R., Razaghi, Roham, Zuzarte, Philip C., Gilpatrick, Timothy, Payne, Alexander, Quick, Joshua, Sadowski, Norah, Holmes, Nadine, de Jesus, Jaqueline Goes, Jones, Karen L., Soulette, Cameron M., Snutch, Terrance P., Loman, Nicholas, Paten, Benedict, Loose, Matthew, Simpson, Jared T., Olsen, Hugh E., Brooks, Angela N., Akeson, Mark, Timp, Winston

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Nanopore native RNA sequencing of a human poly(A) transcriptome (vol 16, pg, 1297, 2019) von Workman, Rachael E., Tang, Alison D., Tang, Paul S., Jain, Miten, Tyson, John R., Razaghi, Roham, Zuzarte, Philip C., Gilpatrick, Timothy, Payne, Alexander, Quick, Joshua, Sadowski, Norah, Holmes, Nadine, de Jesus, Jaqueline Goes, Jones, Karen L., Soulette, Cameron M., Snutch, Terrance P., Loman, Nicholas, Paten, Benedict, Loose, Matthew, Simpson, Jared T., Olsen, Hugh E., Brooks, Angela N., Akeson, Mark, Timp, Winston

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Author Correction: Nanopore native RNA sequencing of a human poly(A) transcriptome von Workman, Rachael E., Tang, Alison D., Tang, Paul S., Jain, Miten, Tyson, John R., Razaghi, Roham, Zuzarte, Philip C., Gilpatrick, Timothy, Payne, Alexander, Quick, Joshua, Sadowski, Norah, Holmes, Nadine, de Jesus, Jaqueline Goes, Jones, Karen L., Soulette, Cameron M., Snutch, Terrance P., Loman, Nicholas, Paten, Benedict, Loose, Matthew, Simpson, Jared T., Olsen, Hugh E., Brooks, Angela N., Akeson, Mark, Timp, Winston

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Temozolomide-induced guanine mutations create exploitable vulnerabilities of guanine-rich DNA and RNA regions in drug-resistant gliomas von Tiek, Deanna M, Erdogdu, Beril, Razaghi, Roham, Jin, Lu, Sadowski, Norah, Alamillo-Ferrer, Carla, Hogg, J Robert, Haddad, Bassem R, Drewry, David H, Wells, Carrow I, Pickett, Julie E, Song, Xiao, Goenka, Anshika, Hu, Bo, Goldlust, Samuel A, Zuercher, William J, Pertea, Mihaela, Timp, Winston, Cheng, Shi-Yuan, Riggins, Rebecca B

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De novo genome assembly of the Tobacco Hornworm moth (Manduca sexta) von Gershman, Ariel, Romer, Tatiana Gelaf, Yunfan Fan, Roham Razaghi, Smith, Wendy A., Timp, Winston

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MOESM2 of Transcriptome assembly from long-read RNA-seq alignments with StringTie2 von Kovaka, Sam, Zimin, Aleksey, Pertea, Geo, Roham Razaghi, Salzberg, Steven, Pertea, Mihaela

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