Distantly sampled soils carry few species in common von Fulthorpe, Roberta R, Roesch, Luiz F W, Riva, Alberto, Triplett, Eric W

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Rethinking microbial diversity analysis in the high throughput sequencing era von Lemos, Leandro N., Fulthorpe, Roberta R., Triplett, Eric W., Roesch, Luiz F.W.

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Pyrosequencing enumerates and contrasts soil microbial diversity von Roesch, Luiz F W, Fulthorpe, Roberta R, Riva, Alberto, Casella, George, Hadwin, Alison K M, Kent, Angela D, Daroub, Samira H, Camargo, Flavio A O, Farmerie, William G, Triplett, Eric W

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BMPOS: a Flexible and User-Friendly Tool Sets for Microbiome Studies von Pylro, Victor S., Morais, Daniel K., de Oliveira, Francislon S., dos Santos, Fausto G., Lemos, Leandro N., Oliveira, Guilherme, Roesch, Luiz F. W.

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Autoimmune-associated genetics impact probiotic colonization of the infant gut von Berryman, Meghan A., Milletich, Patricia L., Petrone, Joseph R., Roesch, Luiz FW, Ilonen, Jorma, Triplett, Eric W., Ludvigsson, Johnny

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Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model von Roesch, Luiz FW, Lorca, Graciela L, Casella, George, Giongo, Adriana, Naranjo, Andres, Pionzio, Arianna M, Li, Nan, Mai, Volker, Wasserfall, Clive H, Schatz, Desmond, Atkinson, Mark A, Neu, Josef, Triplett, Eric W

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PANGEA: pipeline for analysis of next generation amplicons von Giongo, Adriana, Crabb, David B, Davis-Richardson, Austin G, Chauliac, Diane, Mobberley, Jennifer M, Gano, Kelsey A, Mukherjee, Nabanita, Casella, George, Roesch, Luiz FW, Walts, Brandon, Riva, Alberto, King, Gary, Triplett, Eric W

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BTW-Bioinformatics Through Windows: an easy-to-install package to analyze marker gene data von Morais, Daniel, Roesch, Luiz F W, Redmile-Gordon, Marc, Santos, Fausto G, Baldrian, Petr, Andreote, Fernando D, Pylro, Victor S

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Low sequencing efforts bias analyses of shared taxa in microbial communities von Lemos, Leandro N, Fulthorpe, Roberta R, Roesch, Luiz F. W

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Influence of fecal sample storage on bacterial community diversity von Roesch, Luiz F W, Casella, George, Simell, Olli, Krischer, Jeffrey, Wasserfall, Clive H, Schatz, Desmond, Atkinson, Mark A, Neu, Josef, Triplett, Eric W

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Back to the Future of Soil Metagenomics von Nesme, Joseph, Aschouak, Wafa, Agathos, Spiros N, Bailey, Mark, Baldrian, Petr, Brunel, Dominique, Frostegård, Åsa Helena, Heulin, Thierry, Jansson, Janet K, Jurkevitch, Edouard, Kruus, Kristiina K, Kowalchuk, George A, Lagares, Antonio, Lappin-Scott, Hilary M., Lemenceau, Philippe, Le Paslier, Denis, Mandic-Mulec, Ines, Murrell, J Colin, Myrold, David D, Nalin, Renaud, Nannipieri, Paolo, Neufeld, Josh D., O´Gara, Fergal, Parnell, John J, Pühler, Alfred, Pylro, Victor, Ramos, Juan L, Roesch, Luiz FW, Schloter, Michael, Schleper, Christa, Sczyrba, Alexander, Sessitsch, Angela, Sjöling, Sara, Sørensen, Jan, Sørensen, Søren J, Tebbe, Christoph C, Topp, Edward, Tsiamis, George, Van Elsas, Jan Dirk, van Keulen, Geertje, Widmer, Franco, Wagner, Michael, Zhang, Tong, Zhang, Xiaojun, Zhao, Liping, Zhu, Yong-Guan, Vogel, Timothy M., Simonet, Pascal

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Complete Genome Sequence of the N2-Fixing Broad Host Range Endophyte Klebsiella pneumoniae 342 and Virulence Predictions Verified in Mice: e1000141 von Fouts, Derrick E, Tyler, Heather L, DeBoy, Robert T, Daugherty, Sean, Ren, Qinghu, Badger, Jonathan H, Durkin, Anthony S, Huot, Heather, Shrivastava, Susmita, Kothari, Sagar, Dodson, Robert J, Mohamoud, Yasmin, Khouri, Hoda, Roesch, Luiz FW, Krogfelt, Karen A, Struve, Carsten, Triplett, Eric W, Methé, Barbara A

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Complete Genome Sequence of the N sub(2)-Fixing Broad Host Range Endophyte Klebsiella pneumoniae 342 and Virulence Predictions Verified in Mice von Fouts, Derrick E, Tyler, Heather L, DeBoy, Robert T, Daugherty, Sean, Ren, Qinghu, Badger, Jonathan H, Durkin, Anthony S, Huot, Heather, Shrivastava, Susmita, Kothari, Sagar, Dodson, Robert J, Mohamoud, Yasmin, Khouri, Hoda, Roesch, Luiz FW, Krogfelt, Karen A, Struve, Carsten, Triplett, Eric W, Methe, Barbara A, Guttman, David S

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Influence of Fecal Sample Storage on Bacterial Community Diversity von Roesch, Luiz FW, Casella, George, Simell, Olli, Krischer, Jeffrey, Wasserfall, Clive H, Schatz, Desmond, Atkinson, Mark A, Neu, Josef, Triplett, Eric W

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Back to the Future of Soil Metagenomics von Nesme, Joseph, Aschouak, Wafa, Agathos, Spiros N, Bailey, Mark, Baldrian, Petr, Brunel, Dominique, Frostegård, Åsa Helena, Heulin, Thierry, Jansson, Janet K, Jurkevitch, Edouard, Kruus, Kristiina K, Kowalchuk, George A, Lagares, Antonio, Lappin-Scott, Hilary M, Lemenceau, Philippe, Le Paslier, Denis, Mandic-Mulec, Ines, Murrell, J Colin, Myrold, David D, Nalin, Renaud, Nannipieri, Paolo, Neufeld, Josh D, O´Gara, Fergal, Parnell, John J, Pühler, Alfred, Pylro, Victor, Ramos, Juan L, Roesch, Luiz FW, Schloter, Michael, Schleper, Christa, Sczyrba, Alexander, Sessitsch, Angela, Sjöling, Sara, Sørensen, Jan, Sørensen, Søren J, Tebbe, Christoph C, Topp, Edward, Tsiamis, George, Van Elsas, Jan Dirk, van Keulen, Geertje, Widmer, Franco, Wagner, Michael, Zhang, Tong, Zhang, Xiaojun, Zhao, Liping, Zhu, Yong-Guan, Vogel, Timothy M, Simonet, Pascal

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Temporal variability of soil microbial communities after application of dicyandiamide-treated swine slurry and mineral fertilizers von Suleiman, Afnan K.A., Gonzatto, Rogério, Aita, Celso, Lupatini, Manoeli, Jacques, Rodrigo J.S., Kuramae, Eiko E., Antoniolli, Zaida I., Roesch, Luiz F.W.

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