Structural insights into binding specificity, efficacy and bias of a β2AR partial agonist von Masureel, Matthieu, Zou, Yaozhong, Picard, Louis-Philippe, van der Westhuizen, Emma, Mahoney, Jacob P., Rodrigues, João P. G. L. M., Mildorf, Thomas J., Dror, Ron O., Shaw, David E., Bouvier, Michel, Pardon, Els, Steyaert, Jan, Sunahara, Roger K., Weis, William I., Zhang, Cheng, Kobilka, Brian K.

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Sequence co-evolution gives 3D contacts and structures of protein complexes von Hopf, Thomas A, Schärfe, Charlotta P I, Rodrigues, João P G L M, Green, Anna G, Kohlbacher, Oliver, Sander, Chris, Bonvin, Alexandre M J J, Marks, Debora S

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KoBaMIN: a knowledge-based minimization web server for protein structure refinement von Rodrigues, João P G L M, Levitt, Michael, Chopra, Gaurav

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Using AlphaFold and Experimental Structures for the Prediction of the Structure and Binding Affinities of GPCR Complexes via Induced Fit Docking and Free Energy Perturbation von Coskun, Dilek, Lihan, Muyun, Rodrigues, João P. G. L. M., Vass, Márton, Robinson, Daniel, Friesner, Richard A., Miller, Edward B.

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Less Is More: Coarse-Grained Integrative Modeling of Large Biomolecular Assemblies with HADDOCK von Roel-Touris, Jorge, Don, Charleen G, V. Honorato, Rodrigo, Rodrigues, João P. G. L. M, Bonvin, Alexandre M. J. J

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Insights on cross-species transmission of SARS-CoV-2 from structural modeling von Rodrigues, Joao P. G. L. M., Barrera-Vilarmau, Susana, Teixeira, Joao M. C., Sorokina, Marija, Seckel, Elizabeth, Kastritis, Panagiotis L., Levitt, Michael

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Bacterial flagellar motor PL-ring disassembly subcomplexes are widespread and ancient von Kaplan, Mohammed, Sweredoski, Michael J., Rodrigues, Joa˜o P. G. L. M., Tocheva, Elitza I., Chang, Yi-Wei, Ortega, Davi R., Beeby, Morgan, Jensen, Grant J.

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The HADDOCK2.4 web server for integrative modeling of biomolecular complexes von Honorato, Rodrigo V., Trellet, Mikael E., Jiménez-García, Brian, Schaarschmidt, Jörg J., Giulini, Marco, Reys, Victor, Koukos, Panagiotis I., Rodrigues, João P. G. L. M., Karaca, Ezgi, van Zundert, Gydo C. P., Roel-Touris, Jorge, van Noort, Charlotte W., Jandová, Zuzana, Melquiond, Adrien S. J., Bonvin, Alexandre M. J. J.

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pdb-tools: a swiss army knife for molecular structures [version 1; peer review: 2 approved] von Rodrigues, João P. G. L. M, Teixeira, João M.C, Trellet, Mikaël, Bonvin, Alexandre M. J. J

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Defining distance restraints in HADDOCK von Bonvin, Alexandre M. J. J., Karaca, Ezgi, Kastritis, Panagiotis L., Rodrigues, João P. G. L. M.

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The solution structure of monomeric CCL5 in complex with a doubly sulfated N‐terminal segment of CCR5 von Abayev, Meital, Rodrigues, João P. G. L. M., Srivastava, Gautam, Arshava, Boris, Jaremko, Łukasz, Jaremko, Mariusz, Naider, Fred, Levitt, Michael, Anglister, Jacob

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Integrative computational modeling of protein interactions von Rodrigues, João P. G. L. M., Bonvin, Alexandre M. J. J.

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PDB‐tools web: A user‐friendly interface for the manipulation of PDB files von Jiménez‐García, Brian, Teixeira, João M. C., Trellet, Mikael, Rodrigues, João P. G. L. M., Bonvin, Alexandre M. J. J.

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The Supramolecular Organization of a Peptide-Based Nanocarrier at High Molecular Detail von Rad-Malekshahi, Mazda, Visscher, Koen M, Rodrigues, João P. G. L. M, de Vries, Renko, Hennink, Wim E, Baldus, Marc, Bonvin, Alexandre M. J. J, Mastrobattista, Enrico, Weingarth, Markus

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Clustering biomolecular complexes by residue contacts similarity von Rodrigues, João P. G. L. M., Trellet, Mikaël, Schmitz, Christophe, Kastritis, Panagiotis, Karaca, Ezgi, Melquiond, Adrien S. J., Bonvin, Alexandre M. J. J.

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Structural models of human ACE2 variants with SARS-CoV-2 Spike protein for structure-based drug design von Sorokina, Marija, M. C. Teixeira, João, Barrera-Vilarmau, Susana, Paschke, Reinhard, Papasotiriou, Ioannis, Rodrigues, João P. G. L. M., Kastritis, Panagiotis L.

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PortoLivingLab: An IoT-Based Sensing Platform for Smart Cities von Santos, Pedro M., Queiros, Cristina, Sargento, Susana, Aguiar, Ana, Barros, Joao, Rodrigues, Joao G. P., Cruz, Susana B., Lourenco, Tiago, d'Orey, Pedro M., Luis, Yunior, Rocha, Cecilia, Sousa, Sofia, Crisostomo, Sergio

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Sonification of electronic dynamical systems: Spectral characteristics and sound evaluation using EEG features von Acosta Martínez, G., Guevara, E., Kolosovas-Machuca, E. S., Rodrigues, P. G., Soriano, D. C., Tristán Hernández, E., Ontañón-García, L. J.

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Binding Hotspots of BAZ2B Bromodomain: Histone Interaction Revealed by Solution NMR Driven Docking von Ferguson, Fleur M, Dias, David M, Rodrigues, João P. G. L. M, Wienk, Hans, Boelens, Rolf, Bonvin, Alexandre M. J. J, Abell, Chris, Ciulli, Alessio

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A Mobile Sensing Approach to Stress Detection and Memory Activation for Public Bus Drivers von Rodrigues, Joao G. P., Kaiseler, Mariana, Aguiar, Ana, Silva Cunha, Joao P., Barros, Joao

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