Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities von Rodrigues, Jorge L. M., Pellizari, Vivian H., Mueller, Rebecca, Baek, Kyunghwa, da C. Jesus, Ederson, Paula, Fabiana S., Mirza, Babur, Hamaoui, George S., Tsai, Siu Mui, Feigl, Brigitte, Tiedje, James M., Bohannan, Brendan J. M., Nüsslein, Klaus

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Soil microbial community dynamics and assembly under long-term land use change von Goss-Souza, Dennis, Mendes, Lucas William, Borges, Clovis Daniel, Baretta, Dilmar, Tsai, Siu Mui, Rodrigues, Jorge L M

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composite bacteriophage alters colonization by an intestinal commensal bacterium von Duerkop, Breck A, Clements, Charmaine V, Rollins, Darcy, Rodrigues, Jorge L. M, Hooper, Lora V

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Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities von Paula, Fabiana S, Rodrigues, Jorge L. M, Zhou, Jizhong, Wu, Liyou, Mueller, Rebecca C, Mirza, Babur S, Bohannan, Brendan J. M, Nüsslein, Klaus, Deng, Ye, Tiedje, James M, Pellizari, Vivian H

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Response of Free-Living Nitrogen-Fixing Microorganisms to Land Use Change in the Amazon Rainforest von Mirza, Babur S., Potisap, Chotima, Nüsslein, Klaus, Bohannan, Brendan J. M., Rodrigues, Jorge L. M.

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Genomic and Physiological Characterization of the Verrucomicrobia Isolate Diplosphaera colitermitum gen. nov., sp. nov., Reveals Microaerophily and Nitrogen Fixation Genes von WERTZ, John T, KIM, Eunji, BREZNAK, John A, SCHMIDT, Thomas M, RODRIGUES, Jorge L. M

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Distinct Biogeographic Patterns for Archaea, Bacteria, and Fungi along the Vegetation Gradient at the Continental Scale in Eastern China von Ma, Bin, Dai, Zhongmin, Wang, Haizhen, Dsouza, Melissa, Liu, Xingmei, He, Yan, Wu, Jianjun, Rodrigues, Jorge L M, Gilbert, Jack A, Brookes, Philip C, Xu, Jianming

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Development of a Direct Isolation Procedure for Free-Living Diazotrophs under Controlled Hypoxic Conditions von MIRZA, Babur S, RODRIGUES, Jorge L. M

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DNA-Stable Isotope Probing Integrated with Metagenomics for Retrieval of Biphenyl Dioxygenase Genes from Polychlorinated Biphenyl-Contaminated River Sediment von Sul, Woo Jun, Park, Joonhong, Quensen, John F. III, Rodrigues, Jorge L.M, Seliger, Laurie, Tsoi, Tamara V, Zylstra, Gerben J, Tiedje, James M

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Comparative Systems Biology across an Evolutionary Gradient within the Shewanella Genus von Konstantinidis, Konstantinos T., Serres, Margrethe H., Romine, Margaret F., Rodrigues, Jorge L M., Auchtung, Jennifer, McCue, Lee-Ann, Lipton, Mary S., Obraztsova, Anna, Giometti, Carol S., Nealson, Kenneth H., Fredrickson, James K., Tiedje, James M., Gordon, Jeffrey I.

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Towards environmental systems biology of Shewanella von Fredrickson, James K, Tiedje, James M, Romine, Margaret F, Beliaev, Alexander S, Auchtung, Jennifer M, Driscoll, Michael E, Gardner, Timothy S, Nealson, Kenneth H, Osterman, Andrei L, Pinchuk, Grigoriy, Reed, Jennifer L, Rodionov, Dmitry A, Rodrigues, Jorge L. M, Saffarini, Daad A, Serres, Margrethe H, Spormann, Alfred M, Zhulin, Igor B

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Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea von Deng, Jie, Brettar, Ingrid, Luo, Chengwei, Auchtung, Jennifer, Konstantinidis, Konstantinos T, Rodrigues, Jorge L. M, Höfle, Manfred, Tiedje, James M

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Large-Scale Comparative Phenotypic and Genomic Analyses Reveal Ecological Preferences of Shewanella Species and Identify Metabolic Pathways Conserved at the Genus Level von RODRIGUES, Jorge L. M, SERRES, Margrethe H, TIEDJE, James M

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Degradation of Aroclor 1242 Dechlorination Products in Sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. Strain RHA1(fcb) von Rodrigues, Jorge L. M, Kachel, C. Alan, Aiello, Michael R, Quensen, John F, Maltseva, Olga V, Tsoi, Tamara V, Tiedje, James M

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Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest von Mueller, Rebecca C, Paula, Fabiana S, Mirza, Babur S, Rodrigues, Jorge LM, Nüsslein, Klaus, Bohannan, Brendan JM

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Conversion of Amazon rainforest to agriculture alters community traits of methane‐cycling organisms von Meyer, Kyle M., Klein, Ann M., Rodrigues, Jorge L. M., Nüsslein, Klaus, Tringe, Susannah G., Mirza, Babur S., Tiedje, James M., Bohannan, Brendan J. M.

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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes von Kroeger, Marie E, Delmont, Tom O, Eren, A M, Meyer, Kyle M, Guo, Jiarong, Khan, Kiran, Rodrigues, Jorge L M, Bohannan, Brendan J M, Tringe, Susannah G, Borges, Clovis D, Tiedje, James M, Tsai, Siu M, Nüsslein, Klaus

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Land use change in the Amazon rain forest favours generalist fungi von Mueller, Rebecca C., Rodrigues, Jorge L. M., Nüsslein, Klaus, Bohannan, Brendan J. M.

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Burkholderia pseudomallei-absent soil bacterial community results in secondary metabolites that kill this pathogen von Potisap, Chotima, Khan, Md Abdul Wadud, Boonmee, Atcha, Rodrigues, Jorge L. M., Wongratanacheewin, Surasakdi, Sermswan, Rasana W.

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Development of an ecophysiological model for Diplosphaera colotermitum TAV2, a termite hindgut Verrucomicrobium von Isanapong, Jantiya, Sealy Hambright, W, Willis, Austin G, Boonmee, Atcha, Callister, Stephen J, Burnum, Kristin E, Paša-Tolić, Ljiljana, Nicora, Carrie D, Wertz, John T, Schmidt, Thomas M, Rodrigues, Jorge LM

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