Accounting for linkage disequilibrium in genome scans for selection without individual genotypes: The local score approach von Fariello, María Inés, Boitard, Simon, Mercier, Sabine, Robelin, David, Faraut, Thomas, Arnould, Cécile, Recoquillay, Julien, Bouchez, Olivier, Salin, Gérald, Dehais, Patrice, Gourichon, David, Leroux, Sophie, Pitel, Frédérique, Leterrier, Christine, SanCristobal, Magali

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Major Reorganization of Chromosome Conformation During Muscle Development in Pig von Marti-Marimon, Maria, Vialaneix, Nathalie, Lahbib-Mansais, Yvette, Zytnicki, Matthias, Camut, Sylvie, Robelin, David, Yerle-Bouissou, Martine, Foissac, Sylvain

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Pool-hmm: a Python program for estimating the allele frequency spectrum and detecting selective sweeps from next generation sequencing of pooled samples von Boitard, Simon, Kofler, Robert, Françoise, Pierre, Robelin, David, Schlötterer, Christian, Futschik, Andreas

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Meiotic recombination analyses of individual chromosomes in male domestic pigs (Sus scrofa domestica) von Mary, Nicolas, Barasc, Harmonie, Ferchaud, Stéphane, Billon, Yvon, Meslier, Frédéric, Robelin, David, Calgaro, Anne, Loustau-Dudez, Anne-Marie, Bonnet, Nathalie, Yerle, Martine, Acloque, Hervé, Ducos, Alain, Pinton, Alain

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The 3D nuclear conformation of the major histocompatibility complex changes upon cell activation both in porcine and human macrophages von Mompart, Florence, Kamgoue, Alain, Lahbib-Mansais, Yvette, Robelin, David, Bonnet, Agnes, Rogel-Gaillard, Claire, Kocanova, Silvia, Yerle-Bouissou, Martine

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Transcriptomic and nuclear architecture of immune cells after LPS activation von Solinhac, Romain, Mompart, Florence, Martin, Pascal, Robelin, David, Pinton, Philippe, Iannuccelli, Eddie, Lahbib-Mansais, Yvette, Oswald, Isabelle P, Yerle-Bouissou, Martine

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The sheep genome illuminates biology of the rumen and lipid metabolism von Jiang, Yu, Xie, Min, Chen, Wenbin, Talbot, Richard, Maddox, Jillian F., Faraut, Thomas, Wu, Chunhua, Muzny, Donna M., Li, Yuxiang, Zhang, Wenguang, Stanton, Jo-Ann, Brauning, Rudiger, Barris, Wesley C., Hourlier, Thibaut, Aken, Bronwen L., Searle, Stephen M. J., Adelson, David L., Bian, Chao, Cam, Graham R., Chen, Yulin, Cheng, Shifeng, DeSilva, Udaya, Dixen, Karen, Dong, Yang, Fan, Guangyi, Franklin, Ian R., Fu, Shaoyin, Fuentes-Utrilla, Pablo, Guan, Rui, Highland, Margaret A., Holder, Michael E., Huang, Guodong, Ingham, Aaron B., Jhangiani, Shalini N., Kalra, Divya, Kovar, Christie L., Lee, Sandra L., Liu, Weiqing, Liu, Xin, Lu, Changxin, Lv, Tian, Mathew, Tittu, McWilliam, Sean, Menzies, Moira, Pan, Shengkai, Robelin, David, Servin, Bertrand, Townley, David, Wang, Wenliang, Wei, Bin, White, Stephen N., Yang, Xinhua, Ye, Chen, Yue, Yaojing, Zeng, Peng, Zhou, Qing, Hansen, Jacob B., Kristiansen, Karsten, Gibbs, Richard A., Flicek, Paul, Warkup, Christopher C., Jones, Huw E., Oddy, V. Hutton, Nicholas, Frank W., McEwan, John C., Kijas, James W., Wang, Jun, Worley, Kim C., Archibald, Alan L., Cockett, Noelle, Xu, Xun, Wang, Wen, Dalrymple, Brian P.

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Multi-species annotation of transcriptome and chromatin structure in domesticated animals von Foissac, Sylvain, Djebali, Sarah, Munyard, Kylie, Vialaneix, Nathalie, Rau, Andrea, Muret, Kevin, Esquerré, Diane, Zytnicki, Matthias, Derrien, Thomas, Bardou, Philippe, Blanc, Fany, Cabau, Cédric, Crisci, Elisa, Dhorne-Pollet, Sophie, Drouet, Françoise, Faraut, Thomas, Gonzalez, Ignacio, Goubil, Adeline, Lacroix-Lamandé, Sonia, Laurent, Fabrice, Marthey, Sylvain, Marti-Marimon, Maria, Momal-Leisenring, Raphaelle, Mompart, Florence, Quéré, Pascale, Robelin, David, Cristobal, Magali San, Tosser-Klopp, Gwenola, Vincent-Naulleau, Silvia, Fabre, Stéphane, Pinard-Van der Laan, Marie-Hélène, Klopp, Christophe, Tixier-Boichard, Michèle, Acloque, Hervé, Lagarrigue, Sandrine, Giuffra, Elisabetta

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Meiotic recombinaison analyses of individual chromosomes in male domestic pigs (sus scrofa domestica) von Mary, Nicolas, Barasc, Harmonie, Ferchaud, Stéphane, Billon, Yvon, Meslier, Frederic, Robelin, David, Calgaro, Anne, Loustau, Anne-Marie, Bonnet, Nathalie, Yerle, Martine M., Acloque, Hervé, Ducos, Alain, Pinton, Alain

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SIC: a tool to detect short inverted segments in a biological sequence von Robelin, David, Richard, Hugues, Prum, Bernard

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Nuclear architecture of resting and LPS-stimulated porcine neutrophils by 3D FISH von Yerle-Bouissou, Martine, Mompart, Florence, Iannuccelli, Eddie, Robelin, David, Jauneau, Alain, Lahbib-Mansais, Yvette, Delcros, Chantal, Oswald, Isabelle P, Gellin, Joël

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seq++: a package for biological sequences analysis with a range of Markov-related models von Miele, V., Bourguignon, P.Y., Robelin, David, Nuel, Gregory, Richard, H.

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Additional file 3: Figure S2. of Expressed alleles of imprinted IGF2, DLK1 and MEG3 colocalize in 3D-preserved nuclei of porcine fetal cells von Lahbib-Mansais, Yvette, Barasc, Harmonie, Marti-Marimon, Maria, Mompart, Florence, Iannuccelli, Eddie, Robelin, David, Riquet, Juliette, Yerle-Bouissou, Martine

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Additional file 2: Figure S1. of Expressed alleles of imprinted IGF2, DLK1 and MEG3 colocalize in 3D-preserved nuclei of porcine fetal cells von Lahbib-Mansais, Yvette, Barasc, Harmonie, Marti-Marimon, Maria, Mompart, Florence, Iannuccelli, Eddie, Robelin, David, Riquet, Juliette, Yerle-Bouissou, Martine

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Additional file 4: Figure S3. of Expressed alleles of imprinted IGF2, DLK1 and MEG3 colocalize in 3D-preserved nuclei of porcine fetal cells von Lahbib-Mansais, Yvette, Barasc, Harmonie, Marti-Marimon, Maria, Mompart, Florence, Iannuccelli, Eddie, Robelin, David, Riquet, Juliette, Yerle-Bouissou, Martine

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seq++: analyzing biological sequences with a range of Markov-related models von Miele, Vincent, Bourguignon, Pierre-Yves, Robelin, David, Nuel, Grégory, Richard, Hugues

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Detecting Local High-Scoring Segments: a First-Stage Approach for Genome-Wide Association Studies von Guedj, Mickael, Robelin, David, Hoebeke, Mark, Lamarine, Marc, Wojcik, Jérôme, Nuel, Gregory

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Detecting local high-scoring segments: a first stage approach for genome-wide studies von Nuel, Gregory, Guedj, Mickaël, Wojcik, J., Robelin, David, Hoebeke, M.

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Expressed alleles of imprinted IGF2, DLK1 and MEG3 colocalize in 3D-preserved nuclei of porcine fetal cells von Lahbib-Mansais, Yvette, Barasc, Harmonie, Marti-Marimon, Maria, Mompart, Florence, Iannuccelli, Eddie, Robelin, David, Riquet, Juliette, Yerle-Bouissou, Martine

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Detecting Local High-Scoring Segments: a First-Stage Approach for Genome-Wide Association Studies von Guedj, Mickael, Robelin, David, Hoebeke, Mark, Lamarine, Marc, Wojcik, Jerome, Nuel, Gregory

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