Convergence of Molecular, Modeling, and Systems Approaches for an Understanding of the Escherichia coli Heat Shock Response von GUISBERT, Eric, YURA, Takashi, RHODIUS, Virgil A, GROSS, Carol A

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Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon von Gogol, Emily B, Rhodius, Virgil A, Papenfort, Kai, Vogel, Jörg, Gross, Carol A

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Design of orthogonal genetic switches based on a crosstalk map of σs, anti‐σs, and promoters von Rhodius, Virgil A, Segall‐Shapiro, Thomas H, Sharon, Brian D, Ghodasara, Amar, Orlova, Ekaterina, Tabakh, Hannah, Burkhardt, David H, Clancy, Kevin, Peterson, Todd C, Gross, Carol A, Voigt, Christopher A

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Promoter Strength Properties of the Complete Sigma E Regulon of Escherichia coli and Salmonella enterica von MUTALIK, Vivek K, NONAKA, Gen, ADES, Sarah E, RHODIUS, Virgil A, GROSS, Carol A

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Regulation of plasmid-encoded isoprene metabolism in Rhodococcus, a representative of an important link in the global isoprene cycle von Crombie, Andrew T., Khawand, Myriam El, Rhodius, Virgil A., Fengler, Kevin A., Miller, Michael C., Whited, Gregg M., McGenity, Terry J., Murrell, J. Colin

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Unexpected Stress-Reducing Effect of PhaP, a Poly(3-Hydroxybutyrate) Granule-Associated Protein, in Escherichia coli von de Almeida, Alejandra, Catone, Mariela V, Rhodius, Virgil A, Gross, Carol A, Pettinari, M Julia

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Predicting the strength of UP-elements and full-length E. coli σE promoters von Rhodius, Virgil A, Mutalik, Vivek K, Gross, Carol A

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Technical considerations in using DNA microarrays to define regulons von Rhodius, Virgil A., Wade, Joseph T.

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Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, σE von Rhodius, Virgil A, Mutalik, Vivek K

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Identification of the Binding Sites of Regulatory Proteins in Bacterial Genomes von Li, Hao, Rhodius, Virgil, Gross, Carol, Siggia, Eric D.

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Positive activation of gene expression von Rhodius, Virgil A, Busby, Stephen JW

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Using DNA Microarrays to Assay Part Function von Rhodius, Virgil A., Gross, Carol A.

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Uses and pitfalls of microarrays for studying transcriptional regulation von Rhodius, Virgil A, LaRossa, Robert A

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σE Regulates and Is Regulated by a Small RNA in Escherichia coli von THOMPSON, Karl M, RHODIUS, Virgil A, GOTTESMAN, Susan

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Mutational analysis of Escherichia coli σ²⁸ and its target promoters reveals recognition of a composite -10 region, comprised of an 'extended -10' motif and a core -10 element von Koo, Byoung-Mo, Rhodius, Virgil A, Campbell, Elizabeth A, Gross, Carol A

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Dissection of recognition determinants of Escherichia coli σ³² suggests a composite -10 region with an 'extended -10' motif and a core -10 element von Koo, Byoung-Mo, Rhodius, Virgil A, Campbell, Elizabeth A, Gross, Carol A

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Hfq Modulates the σE-Mediated Envelope Stress Response and the σ32-Mediated Cytoplasmic Stress Response in Escherichia coli von GUISBERT, Eric, RHODIUS, Virgil A, AHUJA, Nidhi, WITKIN, Emily, GROSS, Carol A

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Architectural requirements for optimal activation by tandem CRP molecules at a class I CRP-dependent promoter von Tebbutt, John, Rhodius, Virgil A, Webster, Christine L, Busby, Stephen J.W

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Conserved and Variable Functions of the [sigma]E Stress Response in Related Genomes: e2 von Rhodius, Virgil A, Suh, Won Chul, Nonaka, Gen, West, Joyce, Gross, Carol A

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Predicting the strength of UP-elements and full-length E. coli sigma super(E) promoters von Rhodius, Virgil A, Mutalik, Vivek K, Gross, Carol A

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