A comparison of automatic cell identification methods for single-cell RNA sequencing data von Abdelaal, Tamim, Michielsen, Lieke, Cats, Davy, Hoogduin, Dylan, Mei, Hailiang, Reinders, Marcel J T, Mahfouz, Ahmed

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SpaGE: Spatial Gene Enhancement using scRNA-seq von Abdelaal, Tamim, Mourragui, Soufiane, Mahfouz, Ahmed, Reinders, Marcel J T

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Benchmarking variational AutoEncoders on cancer transcriptomics data von Eltager, Mostafa, Abdelaal, Tamim, Charrout, Mohammed, Mahfouz, Ahmed, Reinders, Marcel J. T, Makrodimitris, Stavros

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Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types von van Unen, Vincent, Höllt, Thomas, Pezzotti, Nicola, Li, Na, Reinders, Marcel J. T., Eisemann, Elmar, Koning, Frits, Vilanova, Anna, Lelieveldt, Boudewijn P. F.

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Hierarchical progressive learning of cell identities in single-cell data von Michielsen, Lieke, Reinders, Marcel J. T., Mahfouz, Ahmed

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Unsupervised protein embeddings outperform hand-crafted sequence and structure features at predicting molecular function von Villegas-Morcillo, Amelia, Makrodimitris, Stavros, van Ham, Roeland C H J, Gomez, Angel M, Sanchez, Victoria, Reinders, Marcel J T

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Consequences and opportunities arising due to sparser single-cell RNA-seq datasets von Bouland, Gerard A, Mahfouz, Ahmed, Reinders, Marcel J T

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algorithm-based topographical biomaterials library to instruct cell fate von Unadkat, Hemant V, Hulsman, Marc, Cornelissen, Kamiel, Papenburg, Bernke J, Truckenmüller, Roman K, Post, Gerhard F, Uetz, Marc, Reinders, Marcel J. T, Stamatialis, Dimitrios, van Blitterswijk, Clemens A, de Boer, Jan

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2D Representation of Transcriptomes by t-SNE Exposes Relatedness between Human Tissues von Taskesen, Erdogan, Reinders, Marcel J T

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The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus von Pelkmans, Jordi F., Vos, Aurin M., Scholtmeijer, Karin, Hendrix, Ed, Baars, Johan J. P., Gehrmann, Thies, Reinders, Marcel J. T., Lugones, Luis G., Wösten, Han A. B.

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Fact or factitious? A psychobiological study of authentic and simulated dissociative identity states von Reinders, A A T S, Reinders, A A T Simone, Willemsen, Antoon T M, Vos, Herry P J, den Boer, Johan A, Nijenhuis, Ellert R S

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PRECISE: a domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors von Mourragui, Soufiane, Loog, Marco, van de Wiel, Mark A, Reinders, Marcel J T, Wessels, Lodewyk F A

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Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles von Straver, Roy, Oudejans, Cees B. M., Sistermans, Erik A., Reinders, Marcel J. T.

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Investigating psychobiological causes and mechanisms in functional seizures and functional motor symptoms: Study protocol von Pick, Susannah, David, Anthony S, Edwards, Mark J, Goldstein, Laura H, Hodsoll, John, Millman, L S Merritt, Nicholson, Timothy R, Reinders, A A T S, Stanton, Biba, Winston, Joel S, Mehta, Mitul A, Chalder, Trudie, Hotopf, Matthew

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WISECONDOR: detection of fetal aberrations from shallow sequencing maternal plasma based on a within-sample comparison scheme von Straver, Roy, Sistermans, Erik A, Holstege, Henne, Visser, Allerdien, Oudejans, Cees B M, Reinders, Marcel J T

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Metric learning on expression data for gene function prediction von Makrodimitris, Stavros, Reinders, Marcel J T, van Ham, Roeland C H J

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White matter integrity as a predictor of response to treatment in first episode psychosis von MARQUES, Tiago Reis, TAYLOR, Heather, DAVID, Anthony S, MURRAY, Robin M, PARIANTE, Carmine M, KAPUR, Shitij, DAZZAN, Paola, CHADDOCK, Chris, DELL'ACQUA, Flavio, HANDLEY, Rowena, SIMONE REINDERS, A. A. T, MONDELLI, Valeria, BONACCORSO, Stefania, DIFORTI, Marta, SIMMONS, Andrew

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Dissociative identity disorder: out of the shadows at last? von Reinders, Antje A. T. S., Veltman, Dick J.

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Fewer permutations, more accurate P-values von Knijnenburg, Theo A., Wessels, Lodewyk F. A., Reinders, Marcel J. T., Shmulevich, Ilya

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Secondary integrated analysis of multi-tissue transcriptomic responses to a combined lifestyle intervention in older adults from the GOTO nonrandomized trial von Bogaards, F. A., Gehrmann, T., Beekman, M., Lakenberg, N., Suchiman, H. E. D., de Groot, C. P. G. M., Reinders, M. J. T., Slagboom, P. E.

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